RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 EVA1CP58658 441 aa22.93■■□□□ 1.26
HLA-DPA1-245ENST00000463066 KIF20BQ96Q89 1820 aa22.93■■□□□ 1.26
HLA-DPA1-245ENST00000463066 MAP3K19Q56UN5 1328 aa22.92■■□□□ 1.26
HLA-DPA1-245ENST00000463066 RRS1Q15050 365 aaKnown RBP22.92■■□□□ 1.26
HLA-DPA1-245ENST00000463066 COL5A2P05997 1499 aaPredicted RBP22.92■■□□□ 1.26
HLA-DPA1-245ENST00000463066 SPATA31A5Q5VU36 1347 aa22.91■■□□□ 1.26
HLA-DPA1-245ENST00000463066 SPATA31A7Q8IWB4 1347 aa22.91■■□□□ 1.26
HLA-DPA1-245ENST00000463066 KNSTRNQ9Y448 316 aa22.89■■□□□ 1.25
HLA-DPA1-245ENST00000463066 PER1O15534 1290 aaPredicted RBP22.88■■□□□ 1.25
HLA-DPA1-245ENST00000463066 TNNT2P45379 298 aaPredicted RBP22.88■■□□□ 1.25
HLA-DPA1-245ENST00000463066 USP35Q9P2H5 1018 aa22.88■■□□□ 1.25
HLA-DPA1-245ENST00000463066 SPATA31A1Q5TZJ5 1347 aa22.87■■□□□ 1.25
HLA-DPA1-245ENST00000463066 CDK12Q9NYV4 1490 aaPredicted RBP22.87■■□□□ 1.25
HLA-DPA1-245ENST00000463066 FAM98CQ17RN3 349 aaKnown RBP22.87■■□□□ 1.25
HLA-DPA1-245ENST00000463066 AMER1Q5JTC6 1135 aaPredicted RBP22.87■■□□□ 1.25
HLA-DPA1-245ENST00000463066 CNGB1Q14028 1251 aaPredicted RBP22.85■■□□□ 1.25
HLA-DPA1-245ENST00000463066 IP6K1Q92551 441 aa22.85■■□□□ 1.25
HLA-DPA1-245ENST00000463066 EMILIN1Q9Y6C2 1016 aa22.85■■□□□ 1.25
HLA-DPA1-245ENST00000463066 LTN1O94822 1766 aa22.85■■□□□ 1.25
HLA-DPA1-245ENST00000463066 RGPD5Q99666 1765 aa22.84■■□□□ 1.25
HLA-DPA1-245ENST00000463066 CSB-PGBD3P0DP91 1061 aa22.84■■□□□ 1.25
HLA-DPA1-245ENST00000463066 HOXC9P31274 260 aa22.84■■□□□ 1.25
HLA-DPA1-245ENST00000463066 AMPHP49418 695 aa22.84■■□□□ 1.25
HLA-DPA1-245ENST00000463066 LTV1Q96GA3 475 aaPredicted RBP22.84■■□□□ 1.25
HLA-DPA1-245ENST00000463066 WDR17Q8IZU2 1322 aa22.83■■□□□ 1.25
HLA-DPA1-245ENST00000463066 TOM1L2Q6ZVM7 507 aa22.83■■□□□ 1.25
HLA-DPA1-245ENST00000463066 SEPT12Q8IYM1 358 aa22.83■■□□□ 1.25
HLA-DPA1-245ENST00000463066 ANKRD24Q8TF21 1146 aa22.83■■□□□ 1.25
HLA-DPA1-245ENST00000463066 ABCC6O95255 1503 aa22.82■■□□□ 1.24
HLA-DPA1-245ENST00000463066 CRB1P82279 1406 aa22.82■■□□□ 1.24
HLA-DPA1-245ENST00000463066 NSD2O96028 1365 aa22.81■■□□□ 1.24
HLA-DPA1-245ENST00000463066 A0A0G2JS52 829 aa22.81■■□□□ 1.24
HLA-DPA1-245ENST00000463066 ONECUT3O60422 494 aaPredicted RBP22.81■■□□□ 1.24
HLA-DPA1-245ENST00000463066 MYT1Q01538 1121 aa22.81■■□□□ 1.24
HLA-DPA1-245ENST00000463066 CC2D1BQ5T0F9 858 aaKnown RBP22.81■■□□□ 1.24
HLA-DPA1-245ENST00000463066 MORC1Q86VD1 984 aa22.81■■□□□ 1.24
HLA-DPA1-245ENST00000463066 ERBB3P21860 1342 aa22.81■■□□□ 1.24
HLA-DPA1-245ENST00000463066 PEAK1Q9H792 1746 aa22.8■■□□□ 1.24
HLA-DPA1-245ENST00000463066 PPM1GO15355 546 aaPredicted RBP22.79■■□□□ 1.24
HLA-DPA1-245ENST00000463066 HSP90AB2PQ58FF8 381 aa22.79■■□□□ 1.24
HLA-DPA1-245ENST00000463066 TCP11L2Q8N4U5 519 aa22.79■■□□□ 1.24
HLA-DPA1-245ENST00000463066 POLKQ9UBT6 870 aa22.79■■□□□ 1.24
HLA-DPA1-245ENST00000463066 ANKRD26Q9UPS8 1709 aa22.79■■□□□ 1.24
HLA-DPA1-245ENST00000463066 BLMP54132 1417 aaPredicted RBP22.78■■□□□ 1.24
HLA-DPA1-245ENST00000463066 NLRP2Q9NX02 1062 aa22.78■■□□□ 1.24
HLA-DPA1-245ENST00000463066 RTL1A6NKG5 1358 aa22.77■■□□□ 1.24
HLA-DPA1-245ENST00000463066 SOCS7O14512 581 aa22.77■■□□□ 1.24
HLA-DPA1-245ENST00000463066 CARD10Q9BWT7 1032 aa22.76■■□□□ 1.23
HLA-DPA1-245ENST00000463066 BARGINQ6ZT62 677 aa22.75■■□□□ 1.23
HLA-DPA1-245ENST00000463066 FLT4P35916 1363 aa22.75■■□□□ 1.23
HLA-DPA1-245ENST00000463066 THSD7AQ9UPZ6 1657 aa22.74■■□□□ 1.23
HLA-DPA1-245ENST00000463066 DDX10Q13206 875 aaKnown RBP22.74■■□□□ 1.23
HLA-DPA1-245ENST00000463066 FAM182BQ5T319 152 aa22.73■■□□□ 1.23
HLA-DPA1-245ENST00000463066 INSRP06213 1382 aa22.73■■□□□ 1.23
HLA-DPA1-245ENST00000463066 THRAP3Q9Y2W1 955 aaKnown RBP22.72■■□□□ 1.23
HLA-DPA1-245ENST00000463066 USHBP1Q8N6Y0 703 aa22.71■■□□□ 1.23
HLA-DPA1-245ENST00000463066 NPC1L1Q9UHC9 1359 aa22.71■■□□□ 1.23
HLA-DPA1-245ENST00000463066 BRWD3Q6RI45 1802 aa22.71■■□□□ 1.23
HLA-DPA1-245ENST00000463066 NBPF6Q5VWK0 638 aa22.7■■□□□ 1.22
HLA-DPA1-245ENST00000463066 KRT27Q7Z3Y8 459 aa22.7■■□□□ 1.22
HLA-DPA1-245ENST00000463066 NBPF4Q96M43 638 aa22.7■■□□□ 1.22
HLA-DPA1-245ENST00000463066 KIF24Q5T7B8 1368 aa22.7■■□□□ 1.22
HLA-DPA1-245ENST00000463066 DISP2A7MBM2 1401 aa22.69■■□□□ 1.22
HLA-DPA1-245ENST00000463066 SMG6Q86US8 1419 aaKnown RBP22.68■■□□□ 1.22
HLA-DPA1-245ENST00000463066 MAP2P11137 1827 aaKnown RBP22.68■■□□□ 1.22
HLA-DPA1-245ENST00000463066 EIF4A2Q14240 407 aaKnown RBP22.65■■□□□ 1.22
HLA-DPA1-245ENST00000463066 UPF1Q92900 1129 aaKnown RBP eCLIP22.65■■□□□ 1.22
HLA-DPA1-245ENST00000463066 RGPD2P0DJD1 1756 aa22.65■■□□□ 1.22
HLA-DPA1-245ENST00000463066 MTHFSP49914 203 aa22.64■■□□□ 1.21
HLA-DPA1-245ENST00000463066 FAM208AQ9UK61 1670 aaKnown RBP22.63■■□□□ 1.21
HLA-DPA1-245ENST00000463066 ZNF316A6NFI3 1004 aaPredicted RBP22.63■■□□□ 1.21
HLA-DPA1-245ENST00000463066 LRRC37A3O60309 1634 aa22.62■■□□□ 1.21
HLA-DPA1-245ENST00000463066 IL2RBP14784 551 aa22.62■■□□□ 1.21
HLA-DPA1-245ENST00000463066 PDE3BQ13370 1112 aa22.62■■□□□ 1.21
HLA-DPA1-245ENST00000463066 DDB1Q16531 1140 aa22.62■■□□□ 1.21
HLA-DPA1-245ENST00000463066 EYA1Q99502 592 aa22.62■■□□□ 1.21
HLA-DPA1-245ENST00000463066 WNK3Q9BYP7 1800 aa22.61■■□□□ 1.21
HLA-DPA1-245ENST00000463066 PARP4Q9UKK3 1724 aaKnown RBP22.61■■□□□ 1.21
HLA-DPA1-245ENST00000463066 MEGF6O75095 1541 aa22.61■■□□□ 1.21
HLA-DPA1-245ENST00000463066 CDCA7Q9BWT1 371 aaPredicted RBP22.6■■□□□ 1.21
HLA-DPA1-245ENST00000463066 MARCH10Q8NA82 808 aaPredicted RBP22.59■■□□□ 1.21
HLA-DPA1-245ENST00000463066 PPP2R1AP30153 589 aa22.58■■□□□ 1.21
HLA-DPA1-245ENST00000463066 EXOC5O00471 708 aa22.57■■□□□ 1.2
HLA-DPA1-245ENST00000463066 TNS2Q63HR2 1409 aa22.57■■□□□ 1.2
HLA-DPA1-245ENST00000463066 IL13P35225 146 aa22.56■■□□□ 1.2
HLA-DPA1-245ENST00000463066 PARD3Q8TEW0 1356 aa22.55■■□□□ 1.2
HLA-DPA1-245ENST00000463066 NCAPD2Q15021 1401 aa22.55■■□□□ 1.2
HLA-DPA1-245ENST00000463066 AEBP1Q8IUX7 1158 aa22.54■■□□□ 1.2
HLA-DPA1-245ENST00000463066 RAPGEF4Q8WZA2 1011 aa22.53■■□□□ 1.2
HLA-DPA1-245ENST00000463066 OVOS2A0A0G2JMS6 1433 aa22.53■■□□□ 1.2
HLA-DPA1-245ENST00000463066 IGSF1Q8N6C5 1336 aa22.53■■□□□ 1.2
HLA-DPA1-245ENST00000463066 COL3A1P02461 1466 aaPredicted RBP22.53■■□□□ 1.2
HLA-DPA1-245ENST00000463066 TATP17735 454 aaPredicted RBP22.52■■□□□ 1.2
HLA-DPA1-245ENST00000463066 FAM196AQ6ZSG2 479 aa22.52■■□□□ 1.2
HLA-DPA1-245ENST00000463066 DDX54Q8TDD1 881 aaKnown RBP22.52■■□□□ 1.2
HLA-DPA1-245ENST00000463066 PTF1AQ7RTS3 328 aa22.51■■□□□ 1.19
HLA-DPA1-245ENST00000463066 TRIM37O94972 964 aa22.5■■□□□ 1.19
HLA-DPA1-245ENST00000463066 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
HLA-DPA1-245ENST00000463066 DIAPH1O60610 1272 aaKnown RBP22.49■■□□□ 1.19
HLA-DPA1-245ENST00000463066 SULT6B1Q6IMI4 303 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms