RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 LARP1Q6PKG0 1096 aaKnown RBP16.67■□□□□ 0.26
HPS1-206ENST00000462743 BARGINQ6ZT62 677 aa16.67■□□□□ 0.26
HPS1-206ENST00000462743 SEPT12Q8IYM1 358 aa16.67■□□□□ 0.26
HPS1-206ENST00000462743 THRAP3Q9Y2W1 955 aaKnown RBP16.67■□□□□ 0.26
HPS1-206ENST00000462743 NSD3Q9BZ95 1437 aa16.67■□□□□ 0.26
HPS1-206ENST00000462743 CGNL1Q0VF96 1302 aa16.67■□□□□ 0.26
HPS1-206ENST00000462743 SOX12O15370 315 aa16.66■□□□□ 0.26
HPS1-206ENST00000462743 IP6K1Q92551 441 aa16.66■□□□□ 0.26
HPS1-206ENST00000462743 RGPD5Q99666 1765 aa16.65■□□□□ 0.26
HPS1-206ENST00000462743 WDR17Q8IZU2 1322 aa16.65■□□□□ 0.26
HPS1-206ENST00000462743 CRB1P82279 1406 aa16.64■□□□□ 0.25
HPS1-206ENST00000462743 KIF20BQ96Q89 1820 aa16.64■□□□□ 0.25
HPS1-206ENST00000462743 ZBTB7CA1YPR0 619 aa16.64■□□□□ 0.25
HPS1-206ENST00000462743 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
HPS1-206ENST00000462743 CCDC7Q96M83 1385 aa16.64■□□□□ 0.25
HPS1-206ENST00000462743 PER1O15534 1290 aaPredicted RBP16.63■□□□□ 0.25
HPS1-206ENST00000462743 FAM98CQ17RN3 349 aaKnown RBP16.63■□□□□ 0.25
HPS1-206ENST00000462743 CARD10Q9BWT7 1032 aa16.63■□□□□ 0.25
HPS1-206ENST00000462743 LTN1O94822 1766 aa16.63■□□□□ 0.25
HPS1-206ENST00000462743 MAP3K19Q56UN5 1328 aa16.63■□□□□ 0.25
HPS1-206ENST00000462743 WASHC2AQ641Q2 1341 aa16.63■□□□□ 0.25
HPS1-206ENST00000462743 FBLN1P23142 703 aa16.62■□□□□ 0.25
HPS1-206ENST00000462743 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
HPS1-206ENST00000462743 KIF24Q5T7B8 1368 aa16.62■□□□□ 0.25
HPS1-206ENST00000462743 BRWD3Q6RI45 1802 aa16.61■□□□□ 0.25
HPS1-206ENST00000462743 UPF1Q92900 1129 aaKnown RBP eCLIP16.61■□□□□ 0.25
HPS1-206ENST00000462743 NSD2O96028 1365 aa16.61■□□□□ 0.25
HPS1-206ENST00000462743 BLMP54132 1417 aaPredicted RBP16.61■□□□□ 0.25
HPS1-206ENST00000462743 TOM1L2Q6ZVM7 507 aa16.6■□□□□ 0.25
HPS1-206ENST00000462743 KNSTRNQ9Y448 316 aa16.6■□□□□ 0.25
HPS1-206ENST00000462743 ERBB3P21860 1342 aa16.6■□□□□ 0.25
HPS1-206ENST00000462743 THSD7AQ9UPZ6 1657 aa16.59■□□□□ 0.25
HPS1-206ENST00000462743 HOXC9P31274 260 aa16.59■□□□□ 0.25
HPS1-206ENST00000462743 KRT27Q7Z3Y8 459 aa16.59■□□□□ 0.25
HPS1-206ENST00000462743 CDCA7Q9BWT1 371 aaPredicted RBP16.59■□□□□ 0.25
HPS1-206ENST00000462743 AMPHP49418 695 aa16.58■□□□□ 0.24
HPS1-206ENST00000462743 AMER1Q5JTC6 1135 aaPredicted RBP16.58■□□□□ 0.24
HPS1-206ENST00000462743 ANKRD24Q8TF21 1146 aa16.58■□□□□ 0.24
HPS1-206ENST00000462743 USP35Q9P2H5 1018 aa16.58■□□□□ 0.24
HPS1-206ENST00000462743 RTL1A6NKG5 1358 aa16.58■□□□□ 0.24
HPS1-206ENST00000462743 MAP2P11137 1827 aaKnown RBP16.58■□□□□ 0.24
HPS1-206ENST00000462743 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
HPS1-206ENST00000462743 RRS1Q15050 365 aaKnown RBP16.57■□□□□ 0.24
HPS1-206ENST00000462743 CCDC125Q86Z20 511 aa16.57■□□□□ 0.24
HPS1-206ENST00000462743 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
HPS1-206ENST00000462743 INSRP06213 1382 aa16.55■□□□□ 0.24
HPS1-206ENST00000462743 POLKQ9UBT6 870 aa16.55■□□□□ 0.24
HPS1-206ENST00000462743 NPC1L1Q9UHC9 1359 aa16.54■□□□□ 0.24
HPS1-206ENST00000462743 NLRP2Q9NX02 1062 aa16.54■□□□□ 0.24
HPS1-206ENST00000462743 FLT4P35916 1363 aa16.53■□□□□ 0.24
HPS1-206ENST00000462743 A0A0G2JS52 829 aa16.53■□□□□ 0.24
HPS1-206ENST00000462743 MYT1Q01538 1121 aa16.53■□□□□ 0.24
HPS1-206ENST00000462743 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
HPS1-206ENST00000462743 MORC1Q86VD1 984 aa16.53■□□□□ 0.24
HPS1-206ENST00000462743 DISP2A7MBM2 1401 aa16.53■□□□□ 0.24
HPS1-206ENST00000462743 PDE3BQ13370 1112 aa16.52■□□□□ 0.24
HPS1-206ENST00000462743 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.24
HPS1-206ENST00000462743 PARP4Q9UKK3 1724 aaKnown RBP16.52■□□□□ 0.24
HPS1-206ENST00000462743 FAM208AQ9UK61 1670 aaKnown RBP16.51■□□□□ 0.23
HPS1-206ENST00000462743 DDB1Q16531 1140 aa16.5■□□□□ 0.23
HPS1-206ENST00000462743 FAM196AQ6ZSG2 479 aa16.5■□□□□ 0.23
HPS1-206ENST00000462743 PEAK1Q9H792 1746 aa16.5■□□□□ 0.23
HPS1-206ENST00000462743 EXOC5O00471 708 aa16.49■□□□□ 0.23
HPS1-206ENST00000462743 IL2RBP14784 551 aa16.49■□□□□ 0.23
HPS1-206ENST00000462743 LTV1Q96GA3 475 aaPredicted RBP16.49■□□□□ 0.23
HPS1-206ENST00000462743 WNK3Q9BYP7 1800 aa16.48■□□□□ 0.23
HPS1-206ENST00000462743 NBPF6Q5VWK0 638 aa16.48■□□□□ 0.23
HPS1-206ENST00000462743 NBPF4Q96M43 638 aa16.48■□□□□ 0.23
HPS1-206ENST00000462743 RGPD2P0DJD1 1756 aa16.46■□□□□ 0.23
HPS1-206ENST00000462743 BCL9O00512 1426 aa16.46■□□□□ 0.23
HPS1-206ENST00000462743 SMG6Q86US8 1419 aaKnown RBP16.46■□□□□ 0.23
HPS1-206ENST00000462743 TNNT2P45379 298 aaPredicted RBP16.46■□□□□ 0.23
HPS1-206ENST00000462743 PPM1GO15355 546 aaPredicted RBP16.45■□□□□ 0.22
HPS1-206ENST00000462743 FAM182BQ5T319 152 aa16.45■□□□□ 0.22
HPS1-206ENST00000462743 MARCH10Q8NA82 808 aaPredicted RBP16.45■□□□□ 0.22
HPS1-206ENST00000462743 LRRC37A3O60309 1634 aa16.44■□□□□ 0.22
HPS1-206ENST00000462743 NCAPD2Q15021 1401 aa16.44■□□□□ 0.22
HPS1-206ENST00000462743 CC2D1BQ5T0F9 858 aaKnown RBP16.43■□□□□ 0.22
HPS1-206ENST00000462743 EIF4A2Q14240 407 aaKnown RBP16.42■□□□□ 0.22
HPS1-206ENST00000462743 EYA1Q99502 592 aa16.42■□□□□ 0.22
HPS1-206ENST00000462743 TNS2Q63HR2 1409 aa16.42■□□□□ 0.22
HPS1-206ENST00000462743 SF3B2Q13435 895 aaKnown RBP16.41■□□□□ 0.22
HPS1-206ENST00000462743 OVOS2A0A0G2JMS6 1433 aa16.41■□□□□ 0.22
HPS1-206ENST00000462743 KAT6BQ8WYB5 2073 aa16.41■□□□□ 0.22
HPS1-206ENST00000462743 MTHFSP49914 203 aa16.4■□□□□ 0.22
HPS1-206ENST00000462743 ZCRB1Q8TBF4 217 aaKnown RBP16.4■□□□□ 0.22
HPS1-206ENST00000462743 RAPGEF4Q8WZA2 1011 aa16.4■□□□□ 0.22
HPS1-206ENST00000462743 SBF2Q86WG5 1849 aa16.4■□□□□ 0.22
HPS1-206ENST00000462743 TRIM37O94972 964 aa16.39■□□□□ 0.21
HPS1-206ENST00000462743 TATP17735 454 aaPredicted RBP16.39■□□□□ 0.21
HPS1-206ENST00000462743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.21
HPS1-206ENST00000462743 RGPD1P0DJD0 1748 aa16.39■□□□□ 0.21
HPS1-206ENST00000462743 PLEKHG2Q9H7P9 1386 aa16.38■□□□□ 0.21
HPS1-206ENST00000462743 BAG6P46379 1132 aa16.38■□□□□ 0.21
HPS1-206ENST00000462743 USHBP1Q8N6Y0 703 aa16.38■□□□□ 0.21
HPS1-206ENST00000462743 IGSF1Q8N6C5 1336 aa16.38■□□□□ 0.21
HPS1-206ENST00000462743 MEGF6O75095 1541 aa16.37■□□□□ 0.21
HPS1-206ENST00000462743 IL13P35225 146 aa16.37■□□□□ 0.21
HPS1-206ENST00000462743 BCL11BQ9C0K0 894 aaPredicted RBP16.37■□□□□ 0.21
HPS1-206ENST00000462743 DEFB132Q7Z7B7 95 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms