RNA–Protein interactions for RNA: ENST00000462602.6

SH3BP4-208, Transcript of SH3 domain binding protein 4, humanhuman

TSL 5

Gene SH3BP4, Length 257 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-208ENST00000462602 BLMP54132 1417 aaPredicted RBP12.57□□□□□ -0.4
SH3BP4-208ENST00000462602 HSP90AB2PQ58FF8 381 aa12.57□□□□□ -0.4
SH3BP4-208ENST00000462602 ABCC6O95255 1503 aa12.57□□□□□ -0.4
SH3BP4-208ENST00000462602 FAM83GA6ND36 823 aa12.56□□□□□ -0.4
SH3BP4-208ENST00000462602 ADAMTS2O95450 1211 aa12.56□□□□□ -0.4
SH3BP4-208ENST00000462602 WDR43Q15061 677 aaKnown RBP eCLIP12.56□□□□□ -0.4
SH3BP4-208ENST00000462602 CHRNA2Q15822 529 aa12.56□□□□□ -0.4
SH3BP4-208ENST00000462602 CCDC184Q52MB2 194 aa12.56□□□□□ -0.4
SH3BP4-208ENST00000462602 ABCA3Q99758 1704 aa12.55□□□□□ -0.4
SH3BP4-208ENST00000462602 IL13P35225 146 aa12.55□□□□□ -0.4
SH3BP4-208ENST00000462602 EIF4A2Q14240 407 aaKnown RBP12.54□□□□□ -0.4
SH3BP4-208ENST00000462602 MEX3CQ5U5Q3 659 aaKnown RBP12.54□□□□□ -0.4
SH3BP4-208ENST00000462602 PNISRQ8TF01 805 aaKnown RBP12.54□□□□□ -0.4
SH3BP4-208ENST00000462602 AXIN2Q9Y2T1 843 aa12.54□□□□□ -0.4
SH3BP4-208ENST00000462602 LTN1O94822 1766 aa12.53□□□□□ -0.4
SH3BP4-208ENST00000462602 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
SH3BP4-208ENST00000462602 U2SURPO15042 1029 aaKnown RBP12.53□□□□□ -0.4
SH3BP4-208ENST00000462602 CSB-PGBD3P0DP91 1061 aa12.53□□□□□ -0.4
SH3BP4-208ENST00000462602 EVA1CP58658 441 aa12.53□□□□□ -0.4
SH3BP4-208ENST00000462602 ANKRD24Q8TF21 1146 aa12.53□□□□□ -0.4
SH3BP4-208ENST00000462602 LTV1Q96GA3 475 aaPredicted RBP12.53□□□□□ -0.4
SH3BP4-208ENST00000462602 PEAK1Q9H792 1746 aa12.53□□□□□ -0.4
SH3BP4-208ENST00000462602 U2AF1L5P0DN76 240 aaPredicted RBP12.52□□□□□ -0.41
SH3BP4-208ENST00000462602 U2AF1Q01081 240 aaKnown RBP eCLIP12.52□□□□□ -0.41
SH3BP4-208ENST00000462602 NGLY1Q96IV0 654 aa12.52□□□□□ -0.41
SH3BP4-208ENST00000462602 PNNQ9H307 717 aaKnown RBP12.52□□□□□ -0.41
SH3BP4-208ENST00000462602 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
SH3BP4-208ENST00000462602 ERBB3P21860 1342 aa12.52□□□□□ -0.41
SH3BP4-208ENST00000462602 FAM9BQ8IZU0 186 aa12.51□□□□□ -0.41
SH3BP4-208ENST00000462602 C8orf37Q96NL8 207 aa12.51□□□□□ -0.41
SH3BP4-208ENST00000462602 COL14A1Q05707 1796 aaKnown RBP12.51□□□□□ -0.41
SH3BP4-208ENST00000462602 EYA1Q99502 592 aa12.5□□□□□ -0.41
SH3BP4-208ENST00000462602 ADAMTS8Q9UP79 889 aa12.5□□□□□ -0.41
SH3BP4-208ENST00000462602 WDR17Q8IZU2 1322 aa12.5□□□□□ -0.41
SH3BP4-208ENST00000462602 COL18A1P39060 1754 aa12.5□□□□□ -0.41
SH3BP4-208ENST00000462602 CAMTA1Q9Y6Y1 1673 aa12.49□□□□□ -0.41
SH3BP4-208ENST00000462602 LRP6O75581 1613 aa12.49□□□□□ -0.41
SH3BP4-208ENST00000462602 IGSF1Q8N6C5 1336 aa12.49□□□□□ -0.41
SH3BP4-208ENST00000462602 FCHSD2O94868 740 aa12.49□□□□□ -0.41
SH3BP4-208ENST00000462602 FNBP4Q8N3X1 1017 aaPredicted RBP12.49□□□□□ -0.41
SH3BP4-208ENST00000462602 STRN4Q9NRL3 753 aa12.49□□□□□ -0.41
SH3BP4-208ENST00000462602 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
SH3BP4-208ENST00000462602 LMO7Q8WWI1 1683 aa12.48□□□□□ -0.41
SH3BP4-208ENST00000462602 COL5A2P05997 1499 aaPredicted RBP12.48□□□□□ -0.41
SH3BP4-208ENST00000462602 NEFMP07197 916 aa12.48□□□□□ -0.41
SH3BP4-208ENST00000462602 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
SH3BP4-208ENST00000462602 TOM1L2Q6ZVM7 507 aa12.48□□□□□ -0.41
SH3BP4-208ENST00000462602 UNC5CLQ8IV45 518 aa12.48□□□□□ -0.41
SH3BP4-208ENST00000462602 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
SH3BP4-208ENST00000462602 SLIT2O94813 1529 aa12.47□□□□□ -0.41
SH3BP4-208ENST00000462602 SULT6B1Q6IMI4 303 aa12.47□□□□□ -0.41
SH3BP4-208ENST00000462602 CARD10Q9BWT7 1032 aa12.47□□□□□ -0.41
SH3BP4-208ENST00000462602 HMOX1P09601 288 aa12.46□□□□□ -0.41
SH3BP4-208ENST00000462602 LARP1Q6PKG0 1096 aaKnown RBP12.46□□□□□ -0.41
SH3BP4-208ENST00000462602 USP21Q9UK80 565 aa12.46□□□□□ -0.41
SH3BP4-208ENST00000462602 KDRP35968 1356 aa12.45□□□□□ -0.42
SH3BP4-208ENST00000462602 RUNDC1Q96C34 613 aa12.45□□□□□ -0.42
SH3BP4-208ENST00000462602 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
SH3BP4-208ENST00000462602 CRB1P82279 1406 aa12.45□□□□□ -0.42
SH3BP4-208ENST00000462602 AFF2P51816 1311 aa12.44□□□□□ -0.42
SH3BP4-208ENST00000462602 MAPK8IP3Q9UPT6 1336 aa12.44□□□□□ -0.42
SH3BP4-208ENST00000462602 RGPD5Q99666 1765 aa12.44□□□□□ -0.42
SH3BP4-208ENST00000462602 PRKAR2BP31323 418 aa12.44□□□□□ -0.42
SH3BP4-208ENST00000462602 VPS72Q15906 364 aa12.44□□□□□ -0.42
SH3BP4-208ENST00000462602 USHBP1Q8N6Y0 703 aa12.44□□□□□ -0.42
SH3BP4-208ENST00000462602 RAPGEF4Q8WZA2 1011 aa12.44□□□□□ -0.42
SH3BP4-208ENST00000462602 NWD2Q9ULI1 1742 aa12.44□□□□□ -0.42
SH3BP4-208ENST00000462602 FAM208AQ9UK61 1670 aaKnown RBP12.44□□□□□ -0.42
SH3BP4-208ENST00000462602 NCAPD2Q15021 1401 aa12.44□□□□□ -0.42
SH3BP4-208ENST00000462602 PLCH1Q4KWH8 1693 aa12.43□□□□□ -0.42
SH3BP4-208ENST00000462602 BCL9LQ86UU0 1499 aa12.43□□□□□ -0.42
SH3BP4-208ENST00000462602 ILDR1Q86SU0 546 aaPredicted RBP12.43□□□□□ -0.42
SH3BP4-208ENST00000462602 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
SH3BP4-208ENST00000462602 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
SH3BP4-208ENST00000462602 PLEKHF1Q96S99 279 aa12.43□□□□□ -0.42
SH3BP4-208ENST00000462602 THRAP3Q9Y2W1 955 aaKnown RBP12.43□□□□□ -0.42
SH3BP4-208ENST00000462602 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
SH3BP4-208ENST00000462602 RGPD1P0DJD0 1748 aa12.42□□□□□ -0.42
SH3BP4-208ENST00000462602 SPATA31A5Q5VU36 1347 aa12.42□□□□□ -0.42
SH3BP4-208ENST00000462602 SPATA31A7Q8IWB4 1347 aa12.42□□□□□ -0.42
SH3BP4-208ENST00000462602 TATP17735 454 aaPredicted RBP12.42□□□□□ -0.42
SH3BP4-208ENST00000462602 ZNF772Q68DY9 489 aaPredicted RBP12.42□□□□□ -0.42
SH3BP4-208ENST00000462602 CCDC146Q8IYE0 955 aa12.42□□□□□ -0.42
SH3BP4-208ENST00000462602 TRPC5Q9UL62 973 aaPredicted RBP12.42□□□□□ -0.42
SH3BP4-208ENST00000462602 PLEKHG2Q9H7P9 1386 aa12.42□□□□□ -0.42
SH3BP4-208ENST00000462602 SPATA31A1Q5TZJ5 1347 aa12.41□□□□□ -0.42
SH3BP4-208ENST00000462602 IL2RBP14784 551 aa12.41□□□□□ -0.42
SH3BP4-208ENST00000462602 AMOTQ4VCS5 1084 aa12.41□□□□□ -0.42
SH3BP4-208ENST00000462602 NGEFQ8N5V2 710 aa12.41□□□□□ -0.42
SH3BP4-208ENST00000462602 CDCA7Q9BWT1 371 aaPredicted RBP12.41□□□□□ -0.42
SH3BP4-208ENST00000462602 USP35Q9P2H5 1018 aa12.41□□□□□ -0.42
SH3BP4-208ENST00000462602 NRAPQ86VF7 1730 aa12.4□□□□□ -0.42
SH3BP4-208ENST00000462602 PLEKHO1Q53GL0 409 aaPredicted RBP12.4□□□□□ -0.42
SH3BP4-208ENST00000462602 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
SH3BP4-208ENST00000462602 GAS2L2Q8NHY3 880 aa12.4□□□□□ -0.42
SH3BP4-208ENST00000462602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.4□□□□□ -0.42
SH3BP4-208ENST00000462602 APAF1O14727 1248 aa12.39□□□□□ -0.43
SH3BP4-208ENST00000462602 NCBP3Q53F19 620 aaKnown RBP12.39□□□□□ -0.43
SH3BP4-208ENST00000462602 QTRT2Q9H974 415 aaKnown RBP12.39□□□□□ -0.43
SH3BP4-208ENST00000462602 SPG7Q9UQ90 795 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms