RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CENPJQ9HC77 1338 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPA-210ENST00000462553 USP54Q70EL1 1684 aa11.49□□□□□ -0.57
CDC42BPA-210ENST00000462553 SLC4A2P04920 1241 aa11.48□□□□□ -0.57
CDC42BPA-210ENST00000462553 ABTB2Q8N961 1025 aa11.48□□□□□ -0.57
CDC42BPA-210ENST00000462553 BRD4O60885 1362 aaPredicted RBP11.48□□□□□ -0.57
CDC42BPA-210ENST00000462553 CRB1P82279 1406 aa11.47□□□□□ -0.57
CDC42BPA-210ENST00000462553 TCP11L2Q8N4U5 519 aa11.47□□□□□ -0.57
CDC42BPA-210ENST00000462553 CABP2Q9NPB3 220 aa11.47□□□□□ -0.57
CDC42BPA-210ENST00000462553 NFAT5O94916 1531 aa11.46□□□□□ -0.57
CDC42BPA-210ENST00000462553 GCP02774 474 aa11.46□□□□□ -0.57
CDC42BPA-210ENST00000462553 OVOS2A0A0G2JMS6 1433 aa11.45□□□□□ -0.58
CDC42BPA-210ENST00000462553 OVOS2A0A0J9YW53 1432 aa11.45□□□□□ -0.58
CDC42BPA-210ENST00000462553 OVOS2Q6IE36 1432 aa11.45□□□□□ -0.58
CDC42BPA-210ENST00000462553 AATKQ6ZMQ8 1374 aa11.45□□□□□ -0.58
CDC42BPA-210ENST00000462553 APBA3O96018 575 aa11.45□□□□□ -0.58
CDC42BPA-210ENST00000462553 SRPK2P78362 688 aaKnown RBP11.45□□□□□ -0.58
CDC42BPA-210ENST00000462553 THRAP3Q9Y2W1 955 aaKnown RBP11.45□□□□□ -0.58
CDC42BPA-210ENST00000462553 LTN1O94822 1766 aa11.45□□□□□ -0.58
CDC42BPA-210ENST00000462553 CPSF1Q10570 1443 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-210ENST00000462553 EVA1CP58658 441 aa11.44□□□□□ -0.58
CDC42BPA-210ENST00000462553 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-210ENST00000462553 NLRP13Q86W25 1043 aa11.44□□□□□ -0.58
CDC42BPA-210ENST00000462553 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-210ENST00000462553 ABCC6O95255 1503 aa11.44□□□□□ -0.58
CDC42BPA-210ENST00000462553 PDE3BQ13370 1112 aa11.43□□□□□ -0.58
CDC42BPA-210ENST00000462553 SIN3AQ96ST3 1273 aa11.43□□□□□ -0.58
CDC42BPA-210ENST00000462553 CABP1Q9NZU7 370 aa11.42□□□□□ -0.58
CDC42BPA-210ENST00000462553 NHSQ6T4R5 1651 aa11.42□□□□□ -0.58
CDC42BPA-210ENST00000462553 MYOM1P52179 1685 aa11.41□□□□□ -0.58
CDC42BPA-210ENST00000462553 BCL9O00512 1426 aa11.41□□□□□ -0.58
CDC42BPA-210ENST00000462553 GOLGB1Q14789 3259 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-210ENST00000462553 WDR17Q8IZU2 1322 aa11.4□□□□□ -0.58
CDC42BPA-210ENST00000462553 NLRP6P59044 892 aa11.4□□□□□ -0.58
CDC42BPA-210ENST00000462553 L3MBTL2Q969R5 705 aa11.4□□□□□ -0.58
CDC42BPA-210ENST00000462553 AXIN2Q9Y2T1 843 aa11.4□□□□□ -0.58
CDC42BPA-210ENST00000462553 CD163L1Q9NR16 1453 aa11.39□□□□□ -0.59
CDC42BPA-210ENST00000462553 PAPPAQ13219 1627 aa11.39□□□□□ -0.59
CDC42BPA-210ENST00000462553 PTF1AQ7RTS3 328 aa11.39□□□□□ -0.59
CDC42BPA-210ENST00000462553 BTAF1O14981 1849 aa11.39□□□□□ -0.59
CDC42BPA-210ENST00000462553 TTC21BQ7Z4L5 1316 aa11.38□□□□□ -0.59
CDC42BPA-210ENST00000462553 EVC2Q86UK5 1308 aa11.38□□□□□ -0.59
CDC42BPA-210ENST00000462553 TNS2Q63HR2 1409 aa11.38□□□□□ -0.59
CDC42BPA-210ENST00000462553 ZBTB7CA1YPR0 619 aa11.38□□□□□ -0.59
CDC42BPA-210ENST00000462553 ARHGEF25Q86VW2 580 aa11.38□□□□□ -0.59
CDC42BPA-210ENST00000462553 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-210ENST00000462553 ROCK2O75116 1388 aaKnown RBP11.38□□□□□ -0.59
CDC42BPA-210ENST00000462553 KAT6BQ8WYB5 2073 aa11.37□□□□□ -0.59
CDC42BPA-210ENST00000462553 DDB1Q16531 1140 aa11.37□□□□□ -0.59
CDC42BPA-210ENST00000462553 TOM1L2Q6ZVM7 507 aa11.37□□□□□ -0.59
CDC42BPA-210ENST00000462553 MARCH10Q8NA82 808 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-210ENST00000462553 SBNO2Q9Y2G9 1366 aa11.37□□□□□ -0.59
CDC42BPA-210ENST00000462553 C11orf95C9JLR9 678 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPA-210ENST00000462553 PLSCR1O15162 318 aa11.36□□□□□ -0.59
CDC42BPA-210ENST00000462553 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
CDC42BPA-210ENST00000462553 TUBGCP6Q96RT7 1819 aa11.36□□□□□ -0.59
CDC42BPA-210ENST00000462553 NINLQ9Y2I6 1382 aa11.36□□□□□ -0.59
CDC42BPA-210ENST00000462553 FAM208AQ9UK61 1670 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-210ENST00000462553 TTC21AQ8NDW8 1320 aa11.35□□□□□ -0.59
CDC42BPA-210ENST00000462553 SHANK3Q9BYB0 1731 aa11.35□□□□□ -0.59
CDC42BPA-210ENST00000462553 NEUROD1Q13562 356 aa11.35□□□□□ -0.59
CDC42BPA-210ENST00000462553 PROM2Q8N271 834 aa11.35□□□□□ -0.59
CDC42BPA-210ENST00000462553 QSER1Q2KHR3 1735 aa11.35□□□□□ -0.59
CDC42BPA-210ENST00000462553 RGPD2P0DJD1 1756 aa11.34□□□□□ -0.59
CDC42BPA-210ENST00000462553 USP31Q70CQ4 1352 aa11.34□□□□□ -0.59
CDC42BPA-210ENST00000462553 KTN1Q86UP2 1357 aaKnown RBP11.34□□□□□ -0.59
CDC42BPA-210ENST00000462553 KCNQ2O43526 872 aa11.34□□□□□ -0.59
CDC42BPA-210ENST00000462553 CARD10Q9BWT7 1032 aa11.34□□□□□ -0.59
CDC42BPA-210ENST00000462553 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
CDC42BPA-210ENST00000462553 PDGFDQ9GZP0 370 aaPredicted RBP11.34□□□□□ -0.59
CDC42BPA-210ENST00000462553 CHD4Q14839 1912 aa11.34□□□□□ -0.59
CDC42BPA-210ENST00000462553 CCDC7Q96M83 1385 aa11.33□□□□□ -0.6
CDC42BPA-210ENST00000462553 COL24A1Q17RW2 1714 aa11.33□□□□□ -0.6
CDC42BPA-210ENST00000462553 SOX12O15370 315 aa11.33□□□□□ -0.6
CDC42BPA-210ENST00000462553 KCNH5Q8NCM2 988 aa11.33□□□□□ -0.6
CDC42BPA-210ENST00000462553 ZNF692Q9BU19 519 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPA-210ENST00000462553 CDCA7Q9BWT1 371 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPA-210ENST00000462553 PCGF6Q9BYE7 350 aa11.33□□□□□ -0.6
CDC42BPA-210ENST00000462553 SPON1Q9HCB6 807 aa11.33□□□□□ -0.6
CDC42BPA-210ENST00000462553 DOT1LQ8TEK3 1739 aa11.32□□□□□ -0.6
CDC42BPA-210ENST00000462553 ERBB3P21860 1342 aa11.31□□□□□ -0.6
CDC42BPA-210ENST00000462553 LY75O60449 1722 aa11.3□□□□□ -0.6
CDC42BPA-210ENST00000462553 TONSLQ96HA7 1378 aa11.29□□□□□ -0.6
CDC42BPA-210ENST00000462553 EDC4Q6P2E9 1401 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-210ENST00000462553 CSB-PGBD3P0DP91 1061 aa11.29□□□□□ -0.6
CDC42BPA-210ENST00000462553 PTGER2P43116 358 aa11.29□□□□□ -0.6
CDC42BPA-210ENST00000462553 TXNRD1Q16881 649 aa11.29□□□□□ -0.6
CDC42BPA-210ENST00000462553 NME9Q86XW9 330 aa11.29□□□□□ -0.6
CDC42BPA-210ENST00000462553 PPP1R1BQ9UD71 204 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-210ENST00000462553 A0A1W2PP64 1363 aa11.28□□□□□ -0.6
CDC42BPA-210ENST00000462553 YY1P25490 414 aa11.28□□□□□ -0.6
CDC42BPA-210ENST00000462553 EXOC5O00471 708 aa11.27□□□□□ -0.61
CDC42BPA-210ENST00000462553 ZBTB7AO95365 584 aa11.27□□□□□ -0.61
CDC42BPA-210ENST00000462553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.27□□□□□ -0.61
CDC42BPA-210ENST00000462553 SGIP1Q9BQI5 828 aa11.27□□□□□ -0.61
CDC42BPA-210ENST00000462553 SLC15A2Q16348 729 aa11.26□□□□□ -0.61
CDC42BPA-210ENST00000462553 KIF20BQ96Q89 1820 aa11.25□□□□□ -0.61
CDC42BPA-210ENST00000462553 STK32BQ9NY57 414 aa11.25□□□□□ -0.61
CDC42BPA-210ENST00000462553 CLSPNQ9HAW4 1339 aa11.25□□□□□ -0.61
CDC42BPA-210ENST00000462553 IL2RBP14784 551 aa11.24□□□□□ -0.61
CDC42BPA-210ENST00000462553 CHRDL2Q6WN34 429 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms