RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 RPIAP49247 311 aa7.27□□□□□ -1.25
CSMD3-205ENST00000462254 TRIM32Q13049 653 aa7.27□□□□□ -1.25
CSMD3-205ENST00000462254 MTMR14Q8NCE2 650 aa7.27□□□□□ -1.25
CSMD3-205ENST00000462254 BANK1Q8NDB2 785 aa7.27□□□□□ -1.25
CSMD3-205ENST00000462254 TRIM34Q9BYJ4 488 aa7.27□□□□□ -1.25
CSMD3-205ENST00000462254 SPRYD7Q5W111 196 aa7.26□□□□□ -1.25
CSMD3-205ENST00000462254 CHMP7Q8WUX9 453 aaPredicted RBP7.26□□□□□ -1.25
CSMD3-205ENST00000462254 BAP1Q92560 729 aa7.26□□□□□ -1.25
CSMD3-205ENST00000462254 GJD4Q96KN9 370 aaPredicted RBP7.26□□□□□ -1.25
CSMD3-205ENST00000462254 V9GY48 417 aaPredicted RBP7.26□□□□□ -1.25
CSMD3-205ENST00000462254 KIAA0586Q9BVV6 1533 aa7.26□□□□□ -1.25
CSMD3-205ENST00000462254 UGGT2Q9NYU1 1516 aa7.26□□□□□ -1.25
CSMD3-205ENST00000462254 ARHGAP35Q9NRY4 1499 aa7.25□□□□□ -1.25
CSMD3-205ENST00000462254 A6NJR5 290 aa7.25□□□□□ -1.25
CSMD3-205ENST00000462254 RGS20O76081 388 aa7.25□□□□□ -1.25
CSMD3-205ENST00000462254 CD2BP2O95400 341 aaKnown RBP7.25□□□□□ -1.25
CSMD3-205ENST00000462254 SKOR1P84550 965 aa7.25□□□□□ -1.25
CSMD3-205ENST00000462254 CCDC82Q8N4S0 544 aa7.25□□□□□ -1.25
CSMD3-205ENST00000462254 KIAA0556O60303 1618 aa7.25□□□□□ -1.25
CSMD3-205ENST00000462254 EFCAB5A4FU69 1503 aa7.25□□□□□ -1.25
CSMD3-205ENST00000462254 CLIP1P30622 1438 aa7.25□□□□□ -1.25
CSMD3-205ENST00000462254 ARAP1Q96P48 1450 aa7.24□□□□□ -1.25
CSMD3-205ENST00000462254 LRRIQ1Q96JM4 1722 aa7.24□□□□□ -1.25
CSMD3-205ENST00000462254 LINC01559Q495D7 138 aa7.24□□□□□ -1.25
CSMD3-205ENST00000462254 KCTD17Q8N5Z5 321 aa7.24□□□□□ -1.25
CSMD3-205ENST00000462254 TRAIPQ9BWF2 469 aa7.24□□□□□ -1.25
CSMD3-205ENST00000462254 MCM6Q14566 821 aa7.23□□□□□ -1.25
CSMD3-205ENST00000462254 ZNF697Q5TEC3 545 aa7.23□□□□□ -1.25
CSMD3-205ENST00000462254 ZNF598Q86UK7 904 aaKnown RBP7.23□□□□□ -1.25
CSMD3-205ENST00000462254 TRAK2O60296 914 aa7.22□□□□□ -1.25
CSMD3-205ENST00000462254 SH3BP2P78314 561 aa7.22□□□□□ -1.25
CSMD3-205ENST00000462254 FKBPLQ9UIM3 349 aa7.22□□□□□ -1.25
CSMD3-205ENST00000462254 DISP1Q96F81 1524 aa7.22□□□□□ -1.25
CSMD3-205ENST00000462254 ERCC6L2Q5T890 1561 aa7.21□□□□□ -1.25
CSMD3-205ENST00000462254 GPR37L1O60883 481 aa7.21□□□□□ -1.26
CSMD3-205ENST00000462254 TRIM67Q6ZTA4 783 aa7.21□□□□□ -1.26
CSMD3-205ENST00000462254 ZNF511Q8NB15 262 aa7.21□□□□□ -1.26
CSMD3-205ENST00000462254 FOXJ1Q92949 421 aa7.21□□□□□ -1.26
CSMD3-205ENST00000462254 PKD2L1Q9P0L9 805 aa7.21□□□□□ -1.26
CSMD3-205ENST00000462254 PCF11O94913 1555 aaKnown RBP7.2□□□□□ -1.26
CSMD3-205ENST00000462254 FOXC1Q12948 553 aa7.2□□□□□ -1.26
CSMD3-205ENST00000462254 FHOD3Q2V2M9 1422 aa7.19□□□□□ -1.26
CSMD3-205ENST00000462254 TNFRSF10AO00220 468 aa7.19□□□□□ -1.26
CSMD3-205ENST00000462254 WNT7BP56706 349 aa7.19□□□□□ -1.26
CSMD3-205ENST00000462254 C4orf48Q5BLP8 95 aa7.19□□□□□ -1.26
CSMD3-205ENST00000462254 RC3H1Q5TC82 1133 aaKnown RBP7.19□□□□□ -1.26
CSMD3-205ENST00000462254 ARMC2Q8NEN0 867 aa7.19□□□□□ -1.26
CSMD3-205ENST00000462254 TBC1D2BQ9UPU7 963 aa7.19□□□□□ -1.26
CSMD3-205ENST00000462254 CFAP43Q8NDM7 1665 aa7.19□□□□□ -1.26
CSMD3-205ENST00000462254 SOCS7O14512 581 aa7.18□□□□□ -1.26
CSMD3-205ENST00000462254 GDF9O60383 454 aa7.18□□□□□ -1.26
CSMD3-205ENST00000462254 POM121Q96HA1 1249 aa7.18□□□□□ -1.26
CSMD3-205ENST00000462254 MRGPRX2Q96LB1 330 aa7.18□□□□□ -1.26
CSMD3-205ENST00000462254 OCSTAMPQ9BR26 566 aa7.18□□□□□ -1.26
CSMD3-205ENST00000462254 VPS8Q8N3P4 1428 aa7.18□□□□□ -1.26
CSMD3-205ENST00000462254 RAPGEF6Q8TEU7 1601 aa7.17□□□□□ -1.26
CSMD3-205ENST00000462254 WNT7AO00755 349 aa7.17□□□□□ -1.26
CSMD3-205ENST00000462254 RAD21O60216 631 aa7.17□□□□□ -1.26
CSMD3-205ENST00000462254 SH3BP5LQ7L8J4 393 aa7.17□□□□□ -1.26
CSMD3-205ENST00000462254 GDPD2Q9HCC8 539 aa7.17□□□□□ -1.26
CSMD3-205ENST00000462254 NDUFB9Q9Y6M9 179 aa7.17□□□□□ -1.26
CSMD3-205ENST00000462254 PRG4Q92954 1404 aaPredicted RBP7.17□□□□□ -1.26
CSMD3-205ENST00000462254 AGERQ15109 404 aa7.16□□□□□ -1.26
CSMD3-205ENST00000462254 NBPF14Q5TI25 921 aa7.16□□□□□ -1.26
CSMD3-205ENST00000462254 SH3RF1Q7Z6J0 888 aa7.16□□□□□ -1.26
CSMD3-205ENST00000462254 EHBP1Q8NDI1 1231 aa7.16□□□□□ -1.26
CSMD3-205ENST00000462254 RGS22Q8NE09 1264 aa7.16□□□□□ -1.26
CSMD3-205ENST00000462254 PDZRN3Q9UPQ7 1066 aa7.16□□□□□ -1.26
CSMD3-205ENST00000462254 MAGEB6P1A0A0J9YX57 407 aa7.15□□□□□ -1.26
CSMD3-205ENST00000462254 PDXDC2PQ6P474 469 aa7.15□□□□□ -1.26
CSMD3-205ENST00000462254 CLUAP1Q96AJ1 413 aa7.15□□□□□ -1.26
CSMD3-205ENST00000462254 CARD14Q9BXL6 1004 aa7.15□□□□□ -1.26
CSMD3-205ENST00000462254 COG6Q9Y2V7 657 aa7.15□□□□□ -1.26
CSMD3-205ENST00000462254 HECW1Q76N89 1606 aa7.15□□□□□ -1.27
CSMD3-205ENST00000462254 RIMBP3CA6NJZ7 1639 aa7.14□□□□□ -1.27
CSMD3-205ENST00000462254 RIMBP3BA6NNM3 1639 aa7.14□□□□□ -1.27
CSMD3-205ENST00000462254 SIAH2O43255 324 aa7.14□□□□□ -1.27
CSMD3-205ENST00000462254 ABCA8O94911 1581 aa7.14□□□□□ -1.27
CSMD3-205ENST00000462254 IRF5Q13568 498 aa7.14□□□□□ -1.27
CSMD3-205ENST00000462254 CARMIL2Q6F5E8 1435 aa7.14□□□□□ -1.27
CSMD3-205ENST00000462254 BPHLQ86WA6 291 aaPredicted RBP7.14□□□□□ -1.27
CSMD3-205ENST00000462254 GPKOWQ92917 476 aaPredicted RBP eCLIP7.14□□□□□ -1.27
CSMD3-205ENST00000462254 FYCO1Q9BQS8 1478 aa7.14□□□□□ -1.27
CSMD3-205ENST00000462254 RIMBP3Q9UFD9 1639 aa7.14□□□□□ -1.27
CSMD3-205ENST00000462254 ZC3H4Q9UPT8 1303 aaKnown RBP7.14□□□□□ -1.27
CSMD3-205ENST00000462254 FMN1Q68DA7 1419 aa7.13□□□□□ -1.27
CSMD3-205ENST00000462254 FBXO45P0C2W1 286 aa7.13□□□□□ -1.27
CSMD3-205ENST00000462254 VARSP26640 1264 aaKnown RBP7.13□□□□□ -1.27
CSMD3-205ENST00000462254 ABL2P42684 1182 aa7.13□□□□□ -1.27
CSMD3-205ENST00000462254 PRR20EP86478 221 aa7.13□□□□□ -1.27
CSMD3-205ENST00000462254 PRR20CP86479 221 aa7.13□□□□□ -1.27
CSMD3-205ENST00000462254 PRR20DP86480 221 aa7.13□□□□□ -1.27
CSMD3-205ENST00000462254 PRR20BP86481 221 aa7.13□□□□□ -1.27
CSMD3-205ENST00000462254 PRR20AP86496 221 aa7.13□□□□□ -1.27
CSMD3-205ENST00000462254 ARHGAP9Q9BRR9 750 aa7.13□□□□□ -1.27
CSMD3-205ENST00000462254 TOR4AQ9NXH8 423 aa7.13□□□□□ -1.27
CSMD3-205ENST00000462254 TIAM1Q13009 1591 aa7.12□□□□□ -1.27
CSMD3-205ENST00000462254 ARHGEF11O15085 1522 aa7.12□□□□□ -1.27
CSMD3-205ENST00000462254 GFRA3O60609 400 aa7.12□□□□□ -1.27
CSMD3-205ENST00000462254 PTK2Q05397 1052 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms