RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 COL5A2P05997 1499 aaPredicted RBP15.93■□□□□ 0.14
TRAF3IP1-204ENST00000462122 RTL1A6NKG5 1358 aa15.93■□□□□ 0.14
TRAF3IP1-204ENST00000462122 KIF24Q5T7B8 1368 aa15.93■□□□□ 0.14
TRAF3IP1-204ENST00000462122 RXRBP28702 533 aa15.93■□□□□ 0.14
TRAF3IP1-204ENST00000462122 RBM6P78332 1123 aaKnown RBP15.93■□□□□ 0.14
TRAF3IP1-204ENST00000462122 MAP3K19Q56UN5 1328 aa15.93■□□□□ 0.14
TRAF3IP1-204ENST00000462122 COL18A1P39060 1754 aa15.92■□□□□ 0.14
TRAF3IP1-204ENST00000462122 EVA1CP58658 441 aa15.92■□□□□ 0.14
TRAF3IP1-204ENST00000462122 LTN1O94822 1766 aa15.92■□□□□ 0.14
TRAF3IP1-204ENST00000462122 BLMP54132 1417 aaPredicted RBP15.92■□□□□ 0.14
TRAF3IP1-204ENST00000462122 MORC1Q86VD1 984 aa15.91■□□□□ 0.14
TRAF3IP1-204ENST00000462122 GJD4Q96KN9 370 aaPredicted RBP15.91■□□□□ 0.14
TRAF3IP1-204ENST00000462122 STRN4Q9NRL3 753 aa15.91■□□□□ 0.14
TRAF3IP1-204ENST00000462122 AMPHP49418 695 aa15.9■□□□□ 0.14
TRAF3IP1-204ENST00000462122 RRS1Q15050 365 aaKnown RBP15.9■□□□□ 0.14
TRAF3IP1-204ENST00000462122 IP6K1Q92551 441 aa15.9■□□□□ 0.14
TRAF3IP1-204ENST00000462122 AXIN2Q9Y2T1 843 aa15.9■□□□□ 0.14
TRAF3IP1-204ENST00000462122 CCDC9Q9Y3X0 531 aaKnown RBP15.9■□□□□ 0.14
TRAF3IP1-204ENST00000462122 CDK12Q9NYV4 1490 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP1-204ENST00000462122 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.13
TRAF3IP1-204ENST00000462122 FBLN1P23142 703 aa15.89■□□□□ 0.13
TRAF3IP1-204ENST00000462122 SPATA31A5Q5VU36 1347 aa15.89■□□□□ 0.13
TRAF3IP1-204ENST00000462122 SPATA31A7Q8IWB4 1347 aa15.89■□□□□ 0.13
TRAF3IP1-204ENST00000462122 FLT4P35916 1363 aa15.88■□□□□ 0.13
TRAF3IP1-204ENST00000462122 CRB1P82279 1406 aa15.88■□□□□ 0.13
TRAF3IP1-204ENST00000462122 HOXC9P31274 260 aa15.88■□□□□ 0.13
TRAF3IP1-204ENST00000462122 ERBB3P21860 1342 aa15.88■□□□□ 0.13
TRAF3IP1-204ENST00000462122 WDR17Q8IZU2 1322 aa15.88■□□□□ 0.13
TRAF3IP1-204ENST00000462122 GLI3P10071 1580 aa15.87■□□□□ 0.13
TRAF3IP1-204ENST00000462122 CC2D1BQ5T0F9 858 aaKnown RBP15.87■□□□□ 0.13
TRAF3IP1-204ENST00000462122 LARP1Q6PKG0 1096 aaKnown RBP15.87■□□□□ 0.13
TRAF3IP1-204ENST00000462122 SPATA31A1Q5TZJ5 1347 aa15.87■□□□□ 0.13
TRAF3IP1-204ENST00000462122 CSB-PGBD3P0DP91 1061 aa15.86■□□□□ 0.13
TRAF3IP1-204ENST00000462122 TNNT2P45379 298 aaPredicted RBP15.86■□□□□ 0.13
TRAF3IP1-204ENST00000462122 DDX10Q13206 875 aaKnown RBP15.86■□□□□ 0.13
TRAF3IP1-204ENST00000462122 EMILIN1Q9Y6C2 1016 aa15.86■□□□□ 0.13
TRAF3IP1-204ENST00000462122 SMG6Q86US8 1419 aaKnown RBP15.85■□□□□ 0.13
TRAF3IP1-204ENST00000462122 TOM1L2Q6ZVM7 507 aa15.85■□□□□ 0.13
TRAF3IP1-204ENST00000462122 ANKRD24Q8TF21 1146 aa15.85■□□□□ 0.13
TRAF3IP1-204ENST00000462122 POLKQ9UBT6 870 aa15.85■□□□□ 0.13
TRAF3IP1-204ENST00000462122 THRAP3Q9Y2W1 955 aaKnown RBP15.85■□□□□ 0.13
TRAF3IP1-204ENST00000462122 INSRP06213 1382 aa15.85■□□□□ 0.13
TRAF3IP1-204ENST00000462122 TCP11L2Q8N4U5 519 aa15.84■□□□□ 0.13
TRAF3IP1-204ENST00000462122 RGS12O14924 1447 aa15.84■□□□□ 0.13
TRAF3IP1-204ENST00000462122 PEAK1Q9H792 1746 aa15.83■□□□□ 0.13
TRAF3IP1-204ENST00000462122 RGPD5Q99666 1765 aa15.83■□□□□ 0.12
TRAF3IP1-204ENST00000462122 PPM1GO15355 546 aaPredicted RBP15.83■□□□□ 0.12
TRAF3IP1-204ENST00000462122 ONECUT3O60422 494 aaPredicted RBP15.83■□□□□ 0.12
TRAF3IP1-204ENST00000462122 ILDR2Q71H61 639 aa15.83■□□□□ 0.12
TRAF3IP1-204ENST00000462122 CARD10Q9BWT7 1032 aa15.83■□□□□ 0.12
TRAF3IP1-204ENST00000462122 FAM208AQ9UK61 1670 aaKnown RBP15.83■□□□□ 0.12
TRAF3IP1-204ENST00000462122 HSP90AB2PQ58FF8 381 aa15.82■□□□□ 0.12
TRAF3IP1-204ENST00000462122 BARGINQ6ZT62 677 aa15.82■□□□□ 0.12
TRAF3IP1-204ENST00000462122 USP35Q9P2H5 1018 aa15.82■□□□□ 0.12
TRAF3IP1-204ENST00000462122 MAP2P11137 1827 aaKnown RBP15.81■□□□□ 0.12
TRAF3IP1-204ENST00000462122 FAM98CQ17RN3 349 aaKnown RBP15.81■□□□□ 0.12
TRAF3IP1-204ENST00000462122 CNGB1Q14028 1251 aaPredicted RBP15.8■□□□□ 0.12
TRAF3IP1-204ENST00000462122 SEPT12Q8IYM1 358 aa15.8■□□□□ 0.12
TRAF3IP1-204ENST00000462122 LTV1Q96GA3 475 aaPredicted RBP15.8■□□□□ 0.12
TRAF3IP1-204ENST00000462122 NLRP2Q9NX02 1062 aa15.8■□□□□ 0.12
TRAF3IP1-204ENST00000462122 A0A0G2JS52 829 aa15.79■□□□□ 0.12
TRAF3IP1-204ENST00000462122 MYT1Q01538 1121 aa15.79■□□□□ 0.12
TRAF3IP1-204ENST00000462122 CDCA7Q9BWT1 371 aaPredicted RBP15.79■□□□□ 0.12
TRAF3IP1-204ENST00000462122 THSD7AQ9UPZ6 1657 aa15.79■□□□□ 0.12
TRAF3IP1-204ENST00000462122 PARD3Q8TEW0 1356 aa15.77■□□□□ 0.12
TRAF3IP1-204ENST00000462122 DISP2A7MBM2 1401 aa15.77■□□□□ 0.11
TRAF3IP1-204ENST00000462122 MTHFSP49914 203 aa15.76■□□□□ 0.11
TRAF3IP1-204ENST00000462122 EIF4A2Q14240 407 aaKnown RBP15.75■□□□□ 0.11
TRAF3IP1-204ENST00000462122 RALBP1Q15311 655 aa15.75■□□□□ 0.11
TRAF3IP1-204ENST00000462122 PARP4Q9UKK3 1724 aaKnown RBP15.74■□□□□ 0.11
TRAF3IP1-204ENST00000462122 WNK3Q9BYP7 1800 aa15.74■□□□□ 0.11
TRAF3IP1-204ENST00000462122 IL2RBP14784 551 aa15.74■□□□□ 0.11
TRAF3IP1-204ENST00000462122 PPP2R1AP30153 589 aa15.74■□□□□ 0.11
TRAF3IP1-204ENST00000462122 NBPF6Q5VWK0 638 aa15.74■□□□□ 0.11
TRAF3IP1-204ENST00000462122 NBPF4Q96M43 638 aa15.74■□□□□ 0.11
TRAF3IP1-204ENST00000462122 KRT27Q7Z3Y8 459 aa15.73■□□□□ 0.11
TRAF3IP1-204ENST00000462122 NCAPD2Q15021 1401 aa15.73■□□□□ 0.11
TRAF3IP1-204ENST00000462122 DDB1Q16531 1140 aa15.72■□□□□ 0.11
TRAF3IP1-204ENST00000462122 CFAP53Q96M91 514 aa15.72■□□□□ 0.11
TRAF3IP1-204ENST00000462122 LRRC37A3O60309 1634 aa15.72■□□□□ 0.11
TRAF3IP1-204ENST00000462122 IGSF1Q8N6C5 1336 aa15.71■□□□□ 0.11
TRAF3IP1-204ENST00000462122 TNS2Q63HR2 1409 aa15.71■□□□□ 0.11
TRAF3IP1-204ENST00000462122 PDE3BQ13370 1112 aa15.71■□□□□ 0.11
TRAF3IP1-204ENST00000462122 EYA1Q99502 592 aa15.71■□□□□ 0.11
TRAF3IP1-204ENST00000462122 EP400Q96L91 3159 aa15.71■□□□□ 0.11
TRAF3IP1-204ENST00000462122 EXOC5O00471 708 aa15.7■□□□□ 0.1
TRAF3IP1-204ENST00000462122 IL13P35225 146 aa15.7■□□□□ 0.1
TRAF3IP1-204ENST00000462122 USHBP1Q8N6Y0 703 aa15.7■□□□□ 0.1
TRAF3IP1-204ENST00000462122 RAPGEF4Q8WZA2 1011 aa15.7■□□□□ 0.1
TRAF3IP1-204ENST00000462122 PLEKHG2Q9H7P9 1386 aa15.7■□□□□ 0.1
TRAF3IP1-204ENST00000462122 COL3A1P02461 1466 aaPredicted RBP15.7■□□□□ 0.1
TRAF3IP1-204ENST00000462122 RGPD2P0DJD1 1756 aa15.7■□□□□ 0.1
TRAF3IP1-204ENST00000462122 BRWD3Q6RI45 1802 aa15.69■□□□□ 0.1
TRAF3IP1-204ENST00000462122 DIAPH1O60610 1272 aaKnown RBP15.69■□□□□ 0.1
TRAF3IP1-204ENST00000462122 OVOS2A0A0G2JMS6 1433 aa15.68■□□□□ 0.1
TRAF3IP1-204ENST00000462122 MEGF6O75095 1541 aa15.68■□□□□ 0.1
TRAF3IP1-204ENST00000462122 TATP17735 454 aaPredicted RBP15.68■□□□□ 0.1
TRAF3IP1-204ENST00000462122 PRKRIP1Q9H875 184 aaPredicted RBP15.68■□□□□ 0.1
TRAF3IP1-204ENST00000462122 MYBBP1AQ9BQG0 1328 aaKnown RBP15.68■□□□□ 0.1
TRAF3IP1-204ENST00000462122 SOCS7O14512 581 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms