RNA–Protein interactions for RNA: ENST00000461661.1

ITCH-203, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene ITCH, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-203ENST00000461661 SENP2Q9HC62 589 aa6.35□□□□□ -1.39
ITCH-203ENST00000461661 GPR37L1O60883 481 aa6.34□□□□□ -1.39
ITCH-203ENST00000461661 SLC10A4Q96EP9 437 aa6.34□□□□□ -1.39
ITCH-203ENST00000461661 KCTD15Q96SI1 283 aaPredicted RBP6.34□□□□□ -1.39
ITCH-203ENST00000461661 MRPL14Q6P1L8 145 aaKnown RBP6.33□□□□□ -1.4
ITCH-203ENST00000461661 ZFP42Q96MM3 310 aa6.33□□□□□ -1.4
ITCH-203ENST00000461661 CDV3Q9UKY7 258 aaKnown RBP6.33□□□□□ -1.4
ITCH-203ENST00000461661 CCDC116Q8IYX3 515 aa6.32□□□□□ -1.4
ITCH-203ENST00000461661 KIFC2Q96AC6 838 aa6.32□□□□□ -1.4
ITCH-203ENST00000461661 ZBBXA8MT70 800 aa6.31□□□□□ -1.4
ITCH-203ENST00000461661 FBXO45P0C2W1 286 aa6.31□□□□□ -1.4
ITCH-203ENST00000461661 INTS6LQ5JSJ4 861 aaKnown RBP6.31□□□□□ -1.4
ITCH-203ENST00000461661 PPP1R26Q5T8A7 1209 aaPredicted RBP6.31□□□□□ -1.4
ITCH-203ENST00000461661 EMILIN1Q9Y6C2 1016 aa6.31□□□□□ -1.4
ITCH-203ENST00000461661 DZIP3Q86Y13 1208 aaKnown RBP6.3□□□□□ -1.4
ITCH-203ENST00000461661 MEIOBQ8N635 442 aa6.3□□□□□ -1.4
ITCH-203ENST00000461661 PURBQ96QR8 312 aaKnown RBP6.3□□□□□ -1.4
ITCH-203ENST00000461661 ESPNB1AK53 854 aa6.29□□□□□ -1.4
ITCH-203ENST00000461661 NBPF20Q3BBV1 942 aa6.29□□□□□ -1.4
ITCH-203ENST00000461661 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
ITCH-203ENST00000461661 NDUFB9Q9Y6M9 179 aa6.29□□□□□ -1.4
ITCH-203ENST00000461661 DHX9Q08211 1270 aaKnown RBP6.28□□□□□ -1.4
ITCH-203ENST00000461661 CBLBQ13191 982 aa6.28□□□□□ -1.4
ITCH-203ENST00000461661 SCARF1Q14162 830 aa6.28□□□□□ -1.4
ITCH-203ENST00000461661 Q6ZVU0 165 aa6.28□□□□□ -1.4
ITCH-203ENST00000461661 ERVH48-1M5A8F1 160 aa6.27□□□□□ -1.41
ITCH-203ENST00000461661 NR1H3Q13133 447 aa6.27□□□□□ -1.41
ITCH-203ENST00000461661 C6orf118Q5T5N4 469 aa6.27□□□□□ -1.41
ITCH-203ENST00000461661 TREML4Q6UXN2 200 aa6.27□□□□□ -1.41
ITCH-203ENST00000461661 LINC00528Q8N1L1 170 aa6.27□□□□□ -1.41
ITCH-203ENST00000461661 TMPRSS4Q9NRS4 437 aa6.27□□□□□ -1.41
ITCH-203ENST00000461661 PGPEP1Q9NXJ5 209 aa6.27□□□□□ -1.41
ITCH-203ENST00000461661 TBC1D2BQ9UPU7 963 aa6.27□□□□□ -1.41
ITCH-203ENST00000461661 APBB1O00213 710 aa6.26□□□□□ -1.41
ITCH-203ENST00000461661 GIGYF1O75420 1035 aaPredicted RBP6.26□□□□□ -1.41
ITCH-203ENST00000461661 BMP2P12643 396 aa6.26□□□□□ -1.41
ITCH-203ENST00000461661 RAB15P59190 212 aa6.26□□□□□ -1.41
ITCH-203ENST00000461661 NFX1Q12986 1120 aaKnown RBP6.26□□□□□ -1.41
ITCH-203ENST00000461661 TSEN34Q9BSV6 310 aaKnown RBP6.26□□□□□ -1.41
ITCH-203ENST00000461661 PCDHB9Q9Y5E1 797 aa6.26□□□□□ -1.41
ITCH-203ENST00000461661 SOBPA7XYQ1 873 aa6.25□□□□□ -1.41
ITCH-203ENST00000461661 LILRA1O75019 489 aa6.25□□□□□ -1.41
ITCH-203ENST00000461661 SEPT12Q8IYM1 358 aa6.25□□□□□ -1.41
ITCH-203ENST00000461661 ZNF784Q8NCA9 323 aaPredicted RBP6.25□□□□□ -1.41
ITCH-203ENST00000461661 TERTO14746 1132 aaKnown RBP6.24□□□□□ -1.41
ITCH-203ENST00000461661 UPP2O95045 317 aa6.24□□□□□ -1.41
ITCH-203ENST00000461661 ADD1P35611 737 aaKnown RBP6.24□□□□□ -1.41
ITCH-203ENST00000461661 IRF5Q13568 498 aa6.24□□□□□ -1.41
ITCH-203ENST00000461661 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
ITCH-203ENST00000461661 SOS2Q07890 1332 aaPredicted RBP6.24□□□□□ -1.41
ITCH-203ENST00000461661 WFS1O76024 890 aa6.23□□□□□ -1.41
ITCH-203ENST00000461661 MCCD1P59942 119 aaPredicted RBP6.23□□□□□ -1.41
ITCH-203ENST00000461661 MCM6Q14566 821 aa6.23□□□□□ -1.41
ITCH-203ENST00000461661 KDF1Q8NAX2 398 aaPredicted RBP6.23□□□□□ -1.41
ITCH-203ENST00000461661 AGBL1Q96MI9 1066 aa6.23□□□□□ -1.41
ITCH-203ENST00000461661 GDPD2Q9HCC8 539 aa6.23□□□□□ -1.41
ITCH-203ENST00000461661 NXF1Q9UBU9 619 aaKnown RBP6.23□□□□□ -1.41
ITCH-203ENST00000461661 SPINT1O43278 529 aa6.22□□□□□ -1.41
ITCH-203ENST00000461661 DNMT3LQ9UJW3 386 aa6.22□□□□□ -1.41
ITCH-203ENST00000461661 RELBQ01201 579 aa6.21□□□□□ -1.42
ITCH-203ENST00000461661 PRM3Q9NNZ6 103 aa6.21□□□□□ -1.42
ITCH-203ENST00000461661 CYLDQ9NQC7 956 aa6.21□□□□□ -1.42
ITCH-203ENST00000461661 ZNF330Q9Y3S2 320 aaPredicted RBP6.21□□□□□ -1.42
ITCH-203ENST00000461661 TTLL8A6PVC2 850 aa6.2□□□□□ -1.42
ITCH-203ENST00000461661 MAN1A2O60476 641 aa6.2□□□□□ -1.42
ITCH-203ENST00000461661 ADH1AP07327 375 aa6.2□□□□□ -1.42
ITCH-203ENST00000461661 VEGFBP49765 207 aa6.2□□□□□ -1.42
ITCH-203ENST00000461661 RNF20Q5VTR2 975 aa6.2□□□□□ -1.42
ITCH-203ENST00000461661 CCDC125Q86Z20 511 aa6.2□□□□□ -1.42
ITCH-203ENST00000461661 NPAS3Q8IXF0 933 aa6.2□□□□□ -1.42
ITCH-203ENST00000461661 ZNF395Q9H8N7 513 aaPredicted RBP6.2□□□□□ -1.42
ITCH-203ENST00000461661 CEP126Q9P2H0 1117 aa6.2□□□□□ -1.42
ITCH-203ENST00000461661 H3BM21 787 aa6.19□□□□□ -1.42
ITCH-203ENST00000461661 ABL2P42684 1182 aa6.19□□□□□ -1.42
ITCH-203ENST00000461661 CTSOP43234 321 aaPredicted RBP6.19□□□□□ -1.42
ITCH-203ENST00000461661 ERVK-9P63128 1117 aa6.19□□□□□ -1.42
ITCH-203ENST00000461661 TMEM132AQ24JP5 1023 aa6.19□□□□□ -1.42
ITCH-203ENST00000461661 ZNF592Q92610 1267 aa6.19□□□□□ -1.42
ITCH-203ENST00000461661 FIGNL2A6NMB9 653 aa6.18□□□□□ -1.42
ITCH-203ENST00000461661 PTGIRP43119 386 aa6.18□□□□□ -1.42
ITCH-203ENST00000461661 SCTRP47872 440 aa6.18□□□□□ -1.42
ITCH-203ENST00000461661 VAC14Q08AM6 782 aa6.18□□□□□ -1.42
ITCH-203ENST00000461661 INSM2Q96T92 566 aaPredicted RBP6.18□□□□□ -1.42
ITCH-203ENST00000461661 COG6Q9Y2V7 657 aa6.18□□□□□ -1.42
ITCH-203ENST00000461661 EIF4G2P78344 907 aaKnown RBP eCLIP6.17□□□□□ -1.42
ITCH-203ENST00000461661 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.17□□□□□ -1.42
ITCH-203ENST00000461661 TSGA10IPQ3SY00 556 aa6.17□□□□□ -1.42
ITCH-203ENST00000461661 CC2D2BQ6DHV5 1058 aa6.17□□□□□ -1.42
ITCH-203ENST00000461661 PHTF2Q8N3S3 785 aa6.17□□□□□ -1.42
ITCH-203ENST00000461661 CCDC85AQ96PX6 553 aaPredicted RBP6.17□□□□□ -1.42
ITCH-203ENST00000461661 PCDHB11Q9Y5F2 797 aa6.17□□□□□ -1.42
ITCH-203ENST00000461661 WIPF1O43516 503 aa6.16□□□□□ -1.42
ITCH-203ENST00000461661 RNF217Q8TC41 542 aa6.16□□□□□ -1.42
ITCH-203ENST00000461661 SLC16A10Q8TF71 515 aa6.16□□□□□ -1.42
ITCH-203ENST00000461661 TRIM52Q96A61 297 aa6.16□□□□□ -1.42
ITCH-203ENST00000461661 POM121Q96HA1 1249 aa6.16□□□□□ -1.42
ITCH-203ENST00000461661 ERBB4Q15303 1308 aa6.16□□□□□ -1.42
ITCH-203ENST00000461661 ATP5J2-PTCD1G3V325 749 aa6.15□□□□□ -1.42
ITCH-203ENST00000461661 TRAK2O60296 914 aa6.15□□□□□ -1.42
ITCH-203ENST00000461661 PPFIA3O75145 1194 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms