RNA–Protein interactions for RNA: ENST00000461661.1

ITCH-203, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene ITCH, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-203ENST00000461661 AEBP2Q6ZN18 517 aaPredicted RBP17.62■□□□□ 0.41
ITCH-203ENST00000461661 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
ITCH-203ENST00000461661 PHF23Q9BUL5 403 aaPredicted RBP14.96□□□□□ -0.01
ITCH-203ENST00000461661 SENP3Q9H4L4 574 aaPredicted RBP14.93□□□□□ -0.02
ITCH-203ENST00000461661 FOXD1Q16676 465 aa13.91□□□□□ -0.18
ITCH-203ENST00000461661 PLPPR3Q6T4P5 718 aa13.68□□□□□ -0.22
ITCH-203ENST00000461661 PPP6R1Q9UPN7 881 aa13.26□□□□□ -0.29
ITCH-203ENST00000461661 ADRA2BP18089 450 aa13.22□□□□□ -0.29
ITCH-203ENST00000461661 PIAS4Q8N2W9 510 aaPredicted RBP13.05□□□□□ -0.32
ITCH-203ENST00000461661 MSH5O43196 834 aa12.87□□□□□ -0.35
ITCH-203ENST00000461661 POTEDQ86YR6 584 aa12.09□□□□□ -0.47
ITCH-203ENST00000461661 MAPK8IP2Q13387 824 aaPredicted RBP12.06□□□□□ -0.48
ITCH-203ENST00000461661 PPP4R3CPQ6ZMV5 832 aa12.04□□□□□ -0.48
ITCH-203ENST00000461661 SCAF1Q9H7N4 1312 aaKnown RBP12.04□□□□□ -0.48
ITCH-203ENST00000461661 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
ITCH-203ENST00000461661 CNKSR2Q8WXI2 1034 aa11.74□□□□□ -0.53
ITCH-203ENST00000461661 NCBP3Q53F19 620 aaKnown RBP11.64□□□□□ -0.55
ITCH-203ENST00000461661 HOXD11P31277 338 aaPredicted RBP11.59□□□□□ -0.55
ITCH-203ENST00000461661 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
ITCH-203ENST00000461661 KCNA4P22459 653 aa11.56□□□□□ -0.56
ITCH-203ENST00000461661 NPM3O75607 178 aaKnown RBP11.51□□□□□ -0.57
ITCH-203ENST00000461661 DCAF8L1A6NGE4 600 aa11.36□□□□□ -0.59
ITCH-203ENST00000461661 DNAJC5BQ9UF47 199 aa11.22□□□□□ -0.61
ITCH-203ENST00000461661 RNF39Q9H2S5 420 aa11.04□□□□□ -0.64
ITCH-203ENST00000461661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
ITCH-203ENST00000461661 SLC4A1APQ9BWU0 796 aaKnown RBP10.95□□□□□ -0.66
ITCH-203ENST00000461661 SLC4A2P04920 1241 aa10.94□□□□□ -0.66
ITCH-203ENST00000461661 C1QBPQ07021 282 aaKnown RBP10.87□□□□□ -0.67
ITCH-203ENST00000461661 CACNB1Q02641 598 aaPredicted RBP10.86□□□□□ -0.67
ITCH-203ENST00000461661 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
ITCH-203ENST00000461661 FOXD4L1Q9NU39 408 aa10.67□□□□□ -0.7
ITCH-203ENST00000461661 ZBTB22O15209 634 aa10.66□□□□□ -0.7
ITCH-203ENST00000461661 MYCNP04198 464 aaPredicted RBP10.61□□□□□ -0.71
ITCH-203ENST00000461661 SPINK5Q9NQ38 1064 aaPredicted RBP10.6□□□□□ -0.71
ITCH-203ENST00000461661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.59□□□□□ -0.71
ITCH-203ENST00000461661 HNRNPUL2Q1KMD3 747 aaKnown RBP10.59□□□□□ -0.71
ITCH-203ENST00000461661 SAMD1Q6SPF0 538 aaPredicted RBP10.55□□□□□ -0.72
ITCH-203ENST00000461661 CAPN15O75808 1086 aa10.53□□□□□ -0.72
ITCH-203ENST00000461661 APLP2Q06481 763 aa10.5□□□□□ -0.73
ITCH-203ENST00000461661 TRHP20396 242 aaPredicted RBP10.44□□□□□ -0.74
ITCH-203ENST00000461661 DSG3P32926 999 aa10.44□□□□□ -0.74
ITCH-203ENST00000461661 CSRNP3Q8WYN3 585 aa10.42□□□□□ -0.74
ITCH-203ENST00000461661 EHMT2Q96KQ7 1210 aa10.41□□□□□ -0.74
ITCH-203ENST00000461661 ZNF219Q9P2Y4 722 aaPredicted RBP10.41□□□□□ -0.74
ITCH-203ENST00000461661 ATF5Q9Y2D1 282 aaPredicted RBP10.4□□□□□ -0.74
ITCH-203ENST00000461661 ABCB7O75027 752 aa10.33□□□□□ -0.76
ITCH-203ENST00000461661 ATXN8OSP0DMR3 200 aa10.32□□□□□ -0.76
ITCH-203ENST00000461661 POLA2Q14181 598 aa10.25□□□□□ -0.77
ITCH-203ENST00000461661 ZBTB12Q9Y330 459 aaPredicted RBP10.02□□□□□ -0.81
ITCH-203ENST00000461661 MKRN4PQ13434 485 aaPredicted RBP9.93□□□□□ -0.82
ITCH-203ENST00000461661 FBLN2P98095 1184 aa9.9□□□□□ -0.82
ITCH-203ENST00000461661 RBM42Q9BTD8 480 aaKnown RBP9.9□□□□□ -0.82
ITCH-203ENST00000461661 OSCARQ8IYS5 282 aa9.89□□□□□ -0.83
ITCH-203ENST00000461661 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
ITCH-203ENST00000461661 SPDYE2BA6NHP3 402 aa9.75□□□□□ -0.85
ITCH-203ENST00000461661 SPDYE6P0CI01 402 aa9.75□□□□□ -0.85
ITCH-203ENST00000461661 SPDYE2Q495Y8 402 aa9.75□□□□□ -0.85
ITCH-203ENST00000461661 ZNF692Q9BU19 519 aaPredicted RBP9.69□□□□□ -0.86
ITCH-203ENST00000461661 REM2Q8IYK8 340 aaPredicted RBP9.68□□□□□ -0.86
ITCH-203ENST00000461661 SSUH2Q9Y2M2 353 aa9.68□□□□□ -0.86
ITCH-203ENST00000461661 CHRDL2Q6WN34 429 aa9.6□□□□□ -0.87
ITCH-203ENST00000461661 SPDYE4A6NLX3 237 aa9.58□□□□□ -0.88
ITCH-203ENST00000461661 PITPNM1O00562 1244 aa9.58□□□□□ -0.88
ITCH-203ENST00000461661 PABPN1Q86U42 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
ITCH-203ENST00000461661 POTEHQ6S545 545 aa9.52□□□□□ -0.89
ITCH-203ENST00000461661 SPDYE1Q8NFV5 336 aaPredicted RBP9.51□□□□□ -0.89
ITCH-203ENST00000461661 CLEC11AQ9Y240 323 aa9.47□□□□□ -0.89
ITCH-203ENST00000461661 FXR2P51116 673 aaKnown RBP eCLIP9.44□□□□□ -0.9
ITCH-203ENST00000461661 PIP4P2Q8N4L2 257 aa9.44□□□□□ -0.9
ITCH-203ENST00000461661 PROM2Q8N271 834 aa9.42□□□□□ -0.9
ITCH-203ENST00000461661 FKBP8Q14318 412 aa9.39□□□□□ -0.91
ITCH-203ENST00000461661 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
ITCH-203ENST00000461661 STAG3Q9UJ98 1225 aa9.33□□□□□ -0.92
ITCH-203ENST00000461661 PRKAR2AP13861 404 aaKnown RBP9.32□□□□□ -0.92
ITCH-203ENST00000461661 CHADLQ6NUI6 762 aa9.28□□□□□ -0.92
ITCH-203ENST00000461661 CREBZFQ9NS37 354 aa9.23□□□□□ -0.93
ITCH-203ENST00000461661 FARP1Q9Y4F1 1045 aaPredicted RBP9.18□□□□□ -0.94
ITCH-203ENST00000461661 HAX1O00165 279 aa9.17□□□□□ -0.94
ITCH-203ENST00000461661 EVX2Q03828 476 aa9.14□□□□□ -0.95
ITCH-203ENST00000461661 C19orf67A6NJJ6 358 aa9.13□□□□□ -0.95
ITCH-203ENST00000461661 MNX1P50219 401 aaPredicted RBP9.13□□□□□ -0.95
ITCH-203ENST00000461661 MIER1Q8N108 512 aa9.1□□□□□ -0.95
ITCH-203ENST00000461661 FBXO3Q9UK99 471 aa9.09□□□□□ -0.95
ITCH-203ENST00000461661 SP7Q8TDD2 431 aaPredicted RBP9.06□□□□□ -0.96
ITCH-203ENST00000461661 PLCD3Q8N3E9 789 aa9.04□□□□□ -0.96
ITCH-203ENST00000461661 NPM1P06748 294 aaKnown RBP eCLIP9.03□□□□□ -0.96
ITCH-203ENST00000461661 CD44P16070 742 aaKnown RBP9.03□□□□□ -0.96
ITCH-203ENST00000461661 PLEKHG5O94827 1062 aa9.01□□□□□ -0.97
ITCH-203ENST00000461661 VASPP50552 380 aaPredicted RBP9□□□□□ -0.97
ITCH-203ENST00000461661 ZBTB47Q9UFB7 747 aaPredicted RBP8.95□□□□□ -0.98
ITCH-203ENST00000461661 ZRANB1Q9UGI0 708 aa8.95□□□□□ -0.98
ITCH-203ENST00000461661 NUBP1P53384 320 aa8.92□□□□□ -0.98
ITCH-203ENST00000461661 RASEFQ8IZ41 740 aa8.92□□□□□ -0.98
ITCH-203ENST00000461661 ZNF579Q8NAF0 562 aaKnown RBP8.92□□□□□ -0.98
ITCH-203ENST00000461661 GABBR2O75899 941 aa8.91□□□□□ -0.98
ITCH-203ENST00000461661 PAK3O75914 559 aaPredicted RBP8.91□□□□□ -0.98
ITCH-203ENST00000461661 IFNLR1Q8IU57 520 aaPredicted RBP8.9□□□□□ -0.98
ITCH-203ENST00000461661 TSPYL2Q9H2G4 693 aaPredicted RBP8.89□□□□□ -0.99
ITCH-203ENST00000461661 PHF12Q96QT6 1004 aa8.87□□□□□ -0.99
ITCH-203ENST00000461661 KLHL34Q8N239 644 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms