RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ZNF385CQ66K41 422 aaPredicted RBP8.11□□□□□ -1.11
CLK1-206ENST00000461326 NUTM2AQ8IVF1 878 aaPredicted RBP8.11□□□□□ -1.11
CLK1-206ENST00000461326 CCDC155Q8N6L0 562 aa8.11□□□□□ -1.11
CLK1-206ENST00000461326 FIGNL2A6NMB9 653 aa8.1□□□□□ -1.11
CLK1-206ENST00000461326 IGHA1P01876 353 aa8.1□□□□□ -1.11
CLK1-206ENST00000461326 SH3BP5LQ7L8J4 393 aa8.1□□□□□ -1.11
CLK1-206ENST00000461326 DNMT3AQ9Y6K1 912 aaPredicted RBP8.1□□□□□ -1.11
CLK1-206ENST00000461326 PARP9Q8IXQ6 854 aa8.09□□□□□ -1.11
CLK1-206ENST00000461326 HELBQ8NG08 1087 aaPredicted RBP8.09□□□□□ -1.11
CLK1-206ENST00000461326 GPKOWQ92917 476 aaPredicted RBP eCLIP8.09□□□□□ -1.11
CLK1-206ENST00000461326 SPINT1O43278 529 aa8.08□□□□□ -1.12
CLK1-206ENST00000461326 MARSP56192 900 aaKnown RBP8.08□□□□□ -1.12
CLK1-206ENST00000461326 GPAT2Q6NUI2 795 aa8.08□□□□□ -1.12
CLK1-206ENST00000461326 KANK3Q6NY19 840 aa8.08□□□□□ -1.12
CLK1-206ENST00000461326 CDC14CA4D256 554 aa8.07□□□□□ -1.12
CLK1-206ENST00000461326 SLC35F4A4IF30 521 aa8.07□□□□□ -1.12
CLK1-206ENST00000461326 SLURP2P0DP57 97 aa8.07□□□□□ -1.12
CLK1-206ENST00000461326 IRS1P35568 1242 aa8.07□□□□□ -1.12
CLK1-206ENST00000461326 FOXK2Q01167 660 aa8.07□□□□□ -1.12
CLK1-206ENST00000461326 RNFT1Q5M7Z0 435 aa8.07□□□□□ -1.12
CLK1-206ENST00000461326 PPP1R26Q5T8A7 1209 aaPredicted RBP8.07□□□□□ -1.12
CLK1-206ENST00000461326 Q6ZVU0 165 aa8.07□□□□□ -1.12
CLK1-206ENST00000461326 SV2AQ7L0J3 742 aa8.07□□□□□ -1.12
CLK1-206ENST00000461326 CARD14Q9BXL6 1004 aa8.07□□□□□ -1.12
CLK1-206ENST00000461326 ITGA6P23229 1130 aa8.06□□□□□ -1.12
CLK1-206ENST00000461326 CBLBQ13191 982 aa8.06□□□□□ -1.12
CLK1-206ENST00000461326 TUSC1Q2TAM9 212 aa8.06□□□□□ -1.12
CLK1-206ENST00000461326 SCARF2Q96GP6 870 aaPredicted RBP8.06□□□□□ -1.12
CLK1-206ENST00000461326 CDV3Q9UKY7 258 aaKnown RBP8.06□□□□□ -1.12
CLK1-206ENST00000461326 DHX9Q08211 1270 aaKnown RBP8.05□□□□□ -1.12
CLK1-206ENST00000461326 ERFEQ4G0M1 354 aa8.05□□□□□ -1.12
CLK1-206ENST00000461326 ZC3H15Q8WU90 426 aaKnown RBP8.05□□□□□ -1.12
CLK1-206ENST00000461326 LILRB3O75022 631 aa8.04□□□□□ -1.12
CLK1-206ENST00000461326 ARHGEF15O94989 841 aa8.04□□□□□ -1.12
CLK1-206ENST00000461326 QPCTQ16769 361 aa8.04□□□□□ -1.12
CLK1-206ENST00000461326 VWA5B2Q8N398 1253 aa8.04□□□□□ -1.12
CLK1-206ENST00000461326 WHAMMQ8TF30 809 aa8.04□□□□□ -1.12
CLK1-206ENST00000461326 MAP3K10Q02779 954 aa8.03□□□□□ -1.12
CLK1-206ENST00000461326 MYSM1Q5VVJ2 828 aa8.03□□□□□ -1.12
CLK1-206ENST00000461326 SLC10A4Q96EP9 437 aa8.03□□□□□ -1.12
CLK1-206ENST00000461326 LIMD1Q9UGP4 676 aa8.03□□□□□ -1.12
CLK1-206ENST00000461326 KCTD15Q96SI1 283 aaPredicted RBP8.02□□□□□ -1.13
CLK1-206ENST00000461326 ARHGAP9Q9BRR9 750 aa8.02□□□□□ -1.13
CLK1-206ENST00000461326 TRIM66O15016 1216 aa8.01□□□□□ -1.13
CLK1-206ENST00000461326 POLMQ9NP87 494 aaPredicted RBP8.01□□□□□ -1.13
CLK1-206ENST00000461326 CTSOP43234 321 aaPredicted RBP8□□□□□ -1.13
CLK1-206ENST00000461326 RELBQ01201 579 aa8□□□□□ -1.13
CLK1-206ENST00000461326 PDXDC2PQ6P474 469 aa8□□□□□ -1.13
CLK1-206ENST00000461326 ADAMTS2O95450 1211 aa7.99□□□□□ -1.13
CLK1-206ENST00000461326 TMEM132AQ24JP5 1023 aa7.99□□□□□ -1.13
CLK1-206ENST00000461326 ZBTB33Q86T24 672 aa7.99□□□□□ -1.13
CLK1-206ENST00000461326 AK7Q96M32 723 aa7.99□□□□□ -1.13
CLK1-206ENST00000461326 AGBL1Q96MI9 1066 aa7.99□□□□□ -1.13
CLK1-206ENST00000461326 INSM2Q96T92 566 aaPredicted RBP7.99□□□□□ -1.13
CLK1-206ENST00000461326 ENAMQ9NRM1 1142 aa7.99□□□□□ -1.13
CLK1-206ENST00000461326 SRSF11Q05519 484 aaKnown RBP7.98□□□□□ -1.13
CLK1-206ENST00000461326 RTL5Q5HYW3 569 aaPredicted RBP7.98□□□□□ -1.13
CLK1-206ENST00000461326 RNF217Q8TC41 542 aa7.97□□□□□ -1.13
CLK1-206ENST00000461326 CLK2P49760 499 aaKnown RBP7.96□□□□□ -1.14
CLK1-206ENST00000461326 INTS6LQ5JSJ4 861 aaKnown RBP7.96□□□□□ -1.14
CLK1-206ENST00000461326 LYPD4Q6UWN0 246 aa7.96□□□□□ -1.14
CLK1-206ENST00000461326 FKBPLQ9UIM3 349 aa7.96□□□□□ -1.14
CLK1-206ENST00000461326 ZC3H4Q9UPT8 1303 aaKnown RBP7.96□□□□□ -1.14
CLK1-206ENST00000461326 PHF20L1A8MW92 1017 aa7.95□□□□□ -1.14
CLK1-206ENST00000461326 SENP3-EIF4A1A0A087X0R7 540 aa7.94□□□□□ -1.14
CLK1-206ENST00000461326 CELA2BP08218 269 aaPredicted RBP7.94□□□□□ -1.14
CLK1-206ENST00000461326 PTK2Q05397 1052 aa7.94□□□□□ -1.14
CLK1-206ENST00000461326 NBPF20Q3BBV1 942 aa7.94□□□□□ -1.14
CLK1-206ENST00000461326 RSPH6AQ9H0K4 717 aa7.94□□□□□ -1.14
CLK1-206ENST00000461326 ZNF395Q9H8N7 513 aaPredicted RBP7.94□□□□□ -1.14
CLK1-206ENST00000461326 MSTNO14793 375 aa7.93□□□□□ -1.14
CLK1-206ENST00000461326 CTDSPL2Q05D32 466 aa7.93□□□□□ -1.14
CLK1-206ENST00000461326 ADH1AP07327 375 aa7.92□□□□□ -1.14
CLK1-206ENST00000461326 BRPF1P55201 1214 aaPredicted RBP7.92□□□□□ -1.14
CLK1-206ENST00000461326 ERICH6Q7L0X2 663 aa7.92□□□□□ -1.14
CLK1-206ENST00000461326 LYSMD3Q7Z3D4 306 aa7.92□□□□□ -1.14
CLK1-206ENST00000461326 TRIM52Q96A61 297 aa7.92□□□□□ -1.14
CLK1-206ENST00000461326 SLC24A3Q9HC58 644 aa7.92□□□□□ -1.14
CLK1-206ENST00000461326 PDE4DQ08499 809 aa7.91□□□□□ -1.14
CLK1-206ENST00000461326 FOXR1Q6PIV2 292 aa7.91□□□□□ -1.14
CLK1-206ENST00000461326 PODNQ7Z5L7 613 aa7.91□□□□□ -1.14
CLK1-206ENST00000461326 GMCL1Q96IK5 515 aa7.91□□□□□ -1.14
CLK1-206ENST00000461326 GPSM3Q9Y4H4 160 aa7.91□□□□□ -1.14
CLK1-206ENST00000461326 GAS6Q14393 721 aa7.9□□□□□ -1.14
CLK1-206ENST00000461326 PLA2G4EQ3MJ16 856 aa7.9□□□□□ -1.14
CLK1-206ENST00000461326 FOXD4L5Q5VV16 416 aaPredicted RBP7.9□□□□□ -1.14
CLK1-206ENST00000461326 ZNF784Q8NCA9 323 aaPredicted RBP7.9□□□□□ -1.14
CLK1-206ENST00000461326 TMPRSS4Q9NRS4 437 aa7.9□□□□□ -1.14
CLK1-206ENST00000461326 MBIPQ9NS73 344 aa7.9□□□□□ -1.14
CLK1-206ENST00000461326 ADAM23O75077 832 aa7.89□□□□□ -1.15
CLK1-206ENST00000461326 PTGIRP43119 386 aa7.89□□□□□ -1.15
CLK1-206ENST00000461326 RAB15P59190 212 aa7.89□□□□□ -1.15
CLK1-206ENST00000461326 BEND7Q8N7W2 519 aaPredicted RBP7.89□□□□□ -1.15
CLK1-206ENST00000461326 PNMA1Q8ND90 353 aa7.89□□□□□ -1.15
CLK1-206ENST00000461326 POLR3EQ9NVU0 708 aa7.89□□□□□ -1.15
CLK1-206ENST00000461326 NR6A1Q15406 480 aa7.88□□□□□ -1.15
CLK1-206ENST00000461326 NEUROD2Q15784 382 aa7.88□□□□□ -1.15
CLK1-206ENST00000461326 NEDD1Q8NHV4 660 aa7.88□□□□□ -1.15
CLK1-206ENST00000461326 ADAM32Q8TC27 787 aa7.88□□□□□ -1.15
CLK1-206ENST00000461326 LRRN4Q8WUT4 740 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms