RNA–Protein interactions for RNA: ENST00000461283.5

RBM39-221, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 2,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-221ENST00000461283 BRPF3Q9ULD4 1205 aa4.32□□□□□ -1.72
RBM39-221ENST00000461283 NOVA2Q9UNW9 492 aaKnown RBP4.32□□□□□ -1.72
RBM39-221ENST00000461283 ABCA8O94911 1581 aa4.32□□□□□ -1.72
RBM39-221ENST00000461283 AKNAQ7Z591 1439 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 STRCQ7RTU9 1775 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 ANKRD62A6NC57 917 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 ABL1P00519 1130 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 PLCG2P16885 1265 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 CLCN6P51797 869 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 ZNF211Q13398 564 aaPredicted RBP4.31□□□□□ -1.72
RBM39-221ENST00000461283 NPAS4Q8IUM7 802 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 PKNOX2Q96KN3 472 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 PCDHGC3Q9UN70 934 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 REREQ9P2R6 1566 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 POTEFA5A3E0 1075 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 SOWAHDA6NJG2 315 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 NR6A1Q15406 480 aa4.31□□□□□ -1.72
RBM39-221ENST00000461283 SYMPKQ92797 1274 aaKnown RBP4.31□□□□□ -1.72
RBM39-221ENST00000461283 FHOD3Q2V2M9 1422 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 SETD1AO15047 1707 aaKnown RBP4.3□□□□□ -1.72
RBM39-221ENST00000461283 OATP04181 439 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 SSFA2P28290 1259 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 SEMA3FQ13275 785 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 KCNH8Q96L42 1107 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 BACH2Q9BYV9 841 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 IGF1RP08069 1367 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 DISP1Q96F81 1524 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 MADDQ8WXG6 1647 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 RCCD1A6NED2 376 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 C7P10643 843 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 CD46P15529 392 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 BRD2P25440 801 aaKnown RBP4.3□□□□□ -1.72
RBM39-221ENST00000461283 IRX6P78412 446 aaPredicted RBP4.3□□□□□ -1.72
RBM39-221ENST00000461283 WASHC4Q2M389 1173 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 DPH6Q7L8W6 267 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 SLAIN1Q8ND83 568 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 RNF19AQ9NV58 838 aa4.3□□□□□ -1.72
RBM39-221ENST00000461283 CTTNBP2Q8WZ74 1663 aa4.29□□□□□ -1.72
RBM39-221ENST00000461283 SETD1BQ9UPS6 1966 aaKnown RBP4.29□□□□□ -1.72
RBM39-221ENST00000461283 G3V3G9 751 aa4.29□□□□□ -1.72
RBM39-221ENST00000461283 PER1O15534 1290 aaPredicted RBP4.29□□□□□ -1.72
RBM39-221ENST00000461283 SEC24BO95487 1268 aa4.29□□□□□ -1.72
RBM39-221ENST00000461283 HSPA1LP34931 641 aa4.29□□□□□ -1.72
RBM39-221ENST00000461283 KCNH2Q12809 1159 aa4.29□□□□□ -1.72
RBM39-221ENST00000461283 FAM198AQ9UFP1 575 aa4.29□□□□□ -1.72
RBM39-221ENST00000461283 RIMS1Q86UR5 1692 aaKnown RBP4.29□□□□□ -1.72
RBM39-221ENST00000461283 CARMIL1Q5VZK9 1371 aa4.29□□□□□ -1.72
RBM39-221ENST00000461283 CFAP99D6REC4 459 aa4.29□□□□□ -1.72
RBM39-221ENST00000461283 SMAPO00193 183 aa4.29□□□□□ -1.72
RBM39-221ENST00000461283 YY1P25490 414 aa4.29□□□□□ -1.72
RBM39-221ENST00000461283 ZC3H6P61129 1189 aaKnown RBP4.29□□□□□ -1.72
RBM39-221ENST00000461283 CAPN12Q6ZSI9 719 aa4.29□□□□□ -1.72
RBM39-221ENST00000461283 L3MBTL3Q96JM7 780 aaPredicted RBP4.29□□□□□ -1.72
RBM39-221ENST00000461283 DCBLD2Q96PD2 775 aa4.29□□□□□ -1.72
RBM39-221ENST00000461283 ATP9BO43861 1147 aa4.28□□□□□ -1.72
RBM39-221ENST00000461283 NEFLP07196 543 aa4.28□□□□□ -1.72
RBM39-221ENST00000461283 TMED8Q6PL24 325 aaPredicted RBP4.28□□□□□ -1.72
RBM39-221ENST00000461283 DHX38Q92620 1227 aaKnown RBP4.28□□□□□ -1.72
RBM39-221ENST00000461283 ZNF594Q96JF6 807 aaPredicted RBP4.28□□□□□ -1.72
RBM39-221ENST00000461283 RGS17Q9UGC6 210 aaPredicted RBP4.28□□□□□ -1.72
RBM39-221ENST00000461283 FER1L4A9Z1Z3 1794 aa4.28□□□□□ -1.72
RBM39-221ENST00000461283 RICTORQ6R327 1708 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 USP17L3A6NCW0 530 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 USP17L4A6NCW7 530 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 ERCC5P28715 1186 aaPredicted RBP4.27□□□□□ -1.73
RBM39-221ENST00000461283 USP17L2Q6R6M4 530 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 USP17L1Q7RTZ2 530 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 HIRIP3Q9BW71 556 aaPredicted RBP4.27□□□□□ -1.73
RBM39-221ENST00000461283 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.27□□□□□ -1.73
RBM39-221ENST00000461283 IQSEC3Q9UPP2 1182 aaPredicted RBP4.27□□□□□ -1.73
RBM39-221ENST00000461283 ARHGEF12Q9NZN5 1544 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 DENND4BO75064 1496 aaPredicted RBP4.27□□□□□ -1.73
RBM39-221ENST00000461283 CNTLNQ9NXG0 1405 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 H3BRB1 525 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 PRMT3O60678 531 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 POTEIP0CG38 1075 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 ARID4AP29374 1257 aaPredicted RBP4.27□□□□□ -1.73
RBM39-221ENST00000461283 DIXDC1Q155Q3 683 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 SLFNL1Q499Z3 407 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 FAM174AQ8TBP5 190 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 VTI1AQ96AJ9 217 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 TUT1Q9H6E5 874 aaKnown RBP4.27□□□□□ -1.73
RBM39-221ENST00000461283 RAPGEF2Q9Y4G8 1499 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 MROH2AA6NES4 1674 aa4.27□□□□□ -1.73
RBM39-221ENST00000461283 MARCH6O60337 910 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 PHF14O94880 888 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 HSPA2P54652 639 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 C6orf132Q5T0Z8 1188 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 RDH13Q8NBN7 331 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 UBXN4Q92575 508 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 ZNF592Q92610 1267 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 METRNQ9UJH8 293 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 AGLP35573 1532 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 ZFYVE16Q7Z3T8 1539 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 CDK12Q9NYV4 1490 aaPredicted RBP4.26□□□□□ -1.73
RBM39-221ENST00000461283 FAM135AQ9P2D6 1515 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 SKIP12755 728 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 RASA1P20936 1047 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 TNNI2P48788 182 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 PRELPP51888 382 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms