RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 PDE3BQ13370 1112 aa12.56□□□□□ -0.4
SOX2-OT-202ENST00000461063 ZNF692Q9BU19 519 aaPredicted RBP12.56□□□□□ -0.4
SOX2-OT-202ENST00000461063 THRAP3Q9Y2W1 955 aaKnown RBP12.56□□□□□ -0.4
SOX2-OT-202ENST00000461063 RGPD1P0DJD0 1748 aa12.56□□□□□ -0.4
SOX2-OT-202ENST00000461063 AATKQ6ZMQ8 1374 aa12.56□□□□□ -0.4
SOX2-OT-202ENST00000461063 TTC21BQ7Z4L5 1316 aa12.55□□□□□ -0.4
SOX2-OT-202ENST00000461063 CRB1P82279 1406 aa12.54□□□□□ -0.4
SOX2-OT-202ENST00000461063 EZH2Q15910 746 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-202ENST00000461063 CAMKK2Q96RR4 588 aa12.54□□□□□ -0.4
SOX2-OT-202ENST00000461063 PIK3C2AO00443 1686 aa12.54□□□□□ -0.4
SOX2-OT-202ENST00000461063 TNS1Q9HBL0 1735 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-202ENST00000461063 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-202ENST00000461063 APBA3O96018 575 aa12.53□□□□□ -0.4
SOX2-OT-202ENST00000461063 CARD11Q9BXL7 1154 aa12.53□□□□□ -0.4
SOX2-OT-202ENST00000461063 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
SOX2-OT-202ENST00000461063 SBNO2Q9Y2G9 1366 aa12.53□□□□□ -0.4
SOX2-OT-202ENST00000461063 R3HDM1Q15032 1099 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-202ENST00000461063 ARHGEF25Q86VW2 580 aa12.52□□□□□ -0.41
SOX2-OT-202ENST00000461063 TTC21AQ8NDW8 1320 aa12.52□□□□□ -0.41
SOX2-OT-202ENST00000461063 KTN1Q86UP2 1357 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-202ENST00000461063 KCNH5Q8NCM2 988 aa12.51□□□□□ -0.41
SOX2-OT-202ENST00000461063 PARD3Q8TEW0 1356 aa12.51□□□□□ -0.41
SOX2-OT-202ENST00000461063 SOX12O15370 315 aa12.5□□□□□ -0.41
SOX2-OT-202ENST00000461063 TOM1L2Q6ZVM7 507 aa12.5□□□□□ -0.41
SOX2-OT-202ENST00000461063 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-202ENST00000461063 WDR17Q8IZU2 1322 aa12.5□□□□□ -0.41
SOX2-OT-202ENST00000461063 LRP5O75197 1615 aa12.5□□□□□ -0.41
SOX2-OT-202ENST00000461063 COL18A1P39060 1754 aa12.49□□□□□ -0.41
SOX2-OT-202ENST00000461063 PARP4Q9UKK3 1724 aaKnown RBP12.49□□□□□ -0.41
SOX2-OT-202ENST00000461063 TONSLQ96HA7 1378 aa12.49□□□□□ -0.41
SOX2-OT-202ENST00000461063 AKAP12Q02952 1782 aa12.48□□□□□ -0.41
SOX2-OT-202ENST00000461063 CD163L1Q9NR16 1453 aa12.48□□□□□ -0.41
SOX2-OT-202ENST00000461063 C11orf95C9JLR9 678 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-202ENST00000461063 DDB1Q16531 1140 aa12.48□□□□□ -0.41
SOX2-OT-202ENST00000461063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.48□□□□□ -0.41
SOX2-OT-202ENST00000461063 NFAT5O94916 1531 aa12.47□□□□□ -0.41
SOX2-OT-202ENST00000461063 OVOS2A0A0G2JMS6 1433 aa12.47□□□□□ -0.41
SOX2-OT-202ENST00000461063 OVOS2A0A0J9YW53 1432 aa12.47□□□□□ -0.41
SOX2-OT-202ENST00000461063 OVOS2Q6IE36 1432 aa12.47□□□□□ -0.41
SOX2-OT-202ENST00000461063 USP31Q70CQ4 1352 aa12.47□□□□□ -0.41
SOX2-OT-202ENST00000461063 TMC1Q8TDI8 760 aa12.47□□□□□ -0.41
SOX2-OT-202ENST00000461063 CARD10Q9BWT7 1032 aa12.47□□□□□ -0.41
SOX2-OT-202ENST00000461063 NME9Q86XW9 330 aa12.46□□□□□ -0.41
SOX2-OT-202ENST00000461063 CDCA7Q9BWT1 371 aaPredicted RBP12.46□□□□□ -0.41
SOX2-OT-202ENST00000461063 SLC12A5Q9H2X9 1139 aa12.46□□□□□ -0.41
SOX2-OT-202ENST00000461063 LRRC37A3O60309 1634 aa12.46□□□□□ -0.41
SOX2-OT-202ENST00000461063 PEAK1Q9H792 1746 aa12.45□□□□□ -0.42
SOX2-OT-202ENST00000461063 CSB-PGBD3P0DP91 1061 aa12.45□□□□□ -0.42
SOX2-OT-202ENST00000461063 HDGFL2Q7Z4V5 671 aaPredicted RBP12.45□□□□□ -0.42
SOX2-OT-202ENST00000461063 MARCH10Q8NA82 808 aaPredicted RBP12.45□□□□□ -0.42
SOX2-OT-202ENST00000461063 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
SOX2-OT-202ENST00000461063 NBPF14Q5TI25 921 aa12.44□□□□□ -0.42
SOX2-OT-202ENST00000461063 PUS7Q96PZ0 661 aaKnown RBP12.44□□□□□ -0.42
SOX2-OT-202ENST00000461063 RREB1Q92766 1687 aa12.44□□□□□ -0.42
SOX2-OT-202ENST00000461063 ABCC6O95255 1503 aa12.43□□□□□ -0.42
SOX2-OT-202ENST00000461063 PTF1AQ7RTS3 328 aa12.43□□□□□ -0.42
SOX2-OT-202ENST00000461063 TESK2Q96S53 571 aa12.43□□□□□ -0.42
SOX2-OT-202ENST00000461063 BCL11BQ9C0K0 894 aaPredicted RBP12.43□□□□□ -0.42
SOX2-OT-202ENST00000461063 TERF2IPQ9NYB0 399 aa12.43□□□□□ -0.42
SOX2-OT-202ENST00000461063 BCL9O00512 1426 aa12.43□□□□□ -0.42
SOX2-OT-202ENST00000461063 EDC4Q6P2E9 1401 aaKnown RBP12.43□□□□□ -0.42
SOX2-OT-202ENST00000461063 A0A1W2PP64 1363 aa12.43□□□□□ -0.42
SOX2-OT-202ENST00000461063 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
SOX2-OT-202ENST00000461063 ST20-MTHFSA0A0A6YYL1 179 aa12.42□□□□□ -0.42
SOX2-OT-202ENST00000461063 PLSCR1O15162 318 aa12.42□□□□□ -0.42
SOX2-OT-202ENST00000461063 NUP188Q5SRE5 1749 aa12.42□□□□□ -0.42
SOX2-OT-202ENST00000461063 ERBB3P21860 1342 aa12.41□□□□□ -0.42
SOX2-OT-202ENST00000461063 EXOC5O00471 708 aa12.41□□□□□ -0.42
SOX2-OT-202ENST00000461063 TRIM26Q12899 539 aaPredicted RBP12.41□□□□□ -0.42
SOX2-OT-202ENST00000461063 USP54Q70EL1 1684 aa12.41□□□□□ -0.42
SOX2-OT-202ENST00000461063 RGPD5Q99666 1765 aa12.4□□□□□ -0.42
SOX2-OT-202ENST00000461063 WNK3Q9BYP7 1800 aa12.39□□□□□ -0.43
SOX2-OT-202ENST00000461063 TNS2Q63HR2 1409 aa12.39□□□□□ -0.43
SOX2-OT-202ENST00000461063 PROM2Q8N271 834 aa12.39□□□□□ -0.43
SOX2-OT-202ENST00000461063 ANKRD24Q8TF21 1146 aa12.39□□□□□ -0.43
SOX2-OT-202ENST00000461063 NLRP2Q9NX02 1062 aa12.39□□□□□ -0.43
SOX2-OT-202ENST00000461063 SLC24A1O60721 1099 aa12.38□□□□□ -0.43
SOX2-OT-202ENST00000461063 ANO8Q9HCE9 1232 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-202ENST00000461063 NINLQ9Y2I6 1382 aa12.38□□□□□ -0.43
SOX2-OT-202ENST00000461063 IL2RBP14784 551 aa12.37□□□□□ -0.43
SOX2-OT-202ENST00000461063 RGPD3A6NKT7 1758 aaPredicted RBP12.37□□□□□ -0.43
SOX2-OT-202ENST00000461063 RGPD4Q7Z3J3 1758 aa12.37□□□□□ -0.43
SOX2-OT-202ENST00000461063 SBF2Q86WG5 1849 aa12.37□□□□□ -0.43
SOX2-OT-202ENST00000461063 KCNQ2O43526 872 aa12.36□□□□□ -0.43
SOX2-OT-202ENST00000461063 IP6K1Q92551 441 aa12.36□□□□□ -0.43
SOX2-OT-202ENST00000461063 COG3Q96JB2 828 aa12.35□□□□□ -0.43
SOX2-OT-202ENST00000461063 SPON1Q9HCB6 807 aa12.35□□□□□ -0.43
SOX2-OT-202ENST00000461063 ANKRD36BQ8N2N9 1353 aa12.34□□□□□ -0.43
SOX2-OT-202ENST00000461063 USP47Q96K76 1375 aa12.34□□□□□ -0.43
SOX2-OT-202ENST00000461063 LTN1O94822 1766 aa12.34□□□□□ -0.43
SOX2-OT-202ENST00000461063 TXNRD1Q16881 649 aa12.34□□□□□ -0.43
SOX2-OT-202ENST00000461063 ACSBG1Q96GR2 724 aa12.34□□□□□ -0.43
SOX2-OT-202ENST00000461063 MAP3K19Q56UN5 1328 aa12.34□□□□□ -0.43
SOX2-OT-202ENST00000461063 FBLN1P23142 703 aa12.33□□□□□ -0.44
SOX2-OT-202ENST00000461063 TMF1P82094 1093 aa12.33□□□□□ -0.44
SOX2-OT-202ENST00000461063 LTV1Q96GA3 475 aaPredicted RBP12.33□□□□□ -0.44
SOX2-OT-202ENST00000461063 PDGFDQ9GZP0 370 aaPredicted RBP12.33□□□□□ -0.44
SOX2-OT-202ENST00000461063 ZBTB12Q9Y330 459 aaPredicted RBP12.33□□□□□ -0.44
SOX2-OT-202ENST00000461063 HOXC9P31274 260 aa12.32□□□□□ -0.44
SOX2-OT-202ENST00000461063 PPP1R1BQ9UD71 204 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms