RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 SOX12O15370 315 aa20.93■□□□□ 0.94
NCK1-202ENST00000460960 BCL11BQ9C0K0 894 aaPredicted RBP20.93■□□□□ 0.94
NCK1-202ENST00000460960 AATKQ6ZMQ8 1374 aa20.93■□□□□ 0.94
NCK1-202ENST00000460960 NINLQ9Y2I6 1382 aa20.93■□□□□ 0.94
NCK1-202ENST00000460960 ANO8Q9HCE9 1232 aaPredicted RBP20.92■□□□□ 0.94
NCK1-202ENST00000460960 BRD4O60885 1362 aaPredicted RBP20.92■□□□□ 0.94
NCK1-202ENST00000460960 RGPD3A6NKT7 1758 aaPredicted RBP20.91■□□□□ 0.94
NCK1-202ENST00000460960 CSB-PGBD3P0DP91 1061 aa20.91■□□□□ 0.94
NCK1-202ENST00000460960 PTF1AQ7RTS3 328 aa20.91■□□□□ 0.94
NCK1-202ENST00000460960 RGPD4Q7Z3J3 1758 aa20.91■□□□□ 0.94
NCK1-202ENST00000460960 SLIT3O75094 1523 aa20.9■□□□□ 0.94
NCK1-202ENST00000460960 PLSCR1O15162 318 aa20.9■□□□□ 0.94
NCK1-202ENST00000460960 WNK3Q9BYP7 1800 aa20.9■□□□□ 0.94
NCK1-202ENST00000460960 AKAP12Q02952 1782 aa20.9■□□□□ 0.94
NCK1-202ENST00000460960 PIK3C2AO00443 1686 aa20.89■□□□□ 0.94
NCK1-202ENST00000460960 ZBTB7AO95365 584 aa20.89■□□□□ 0.93
NCK1-202ENST00000460960 WDR17Q8IZU2 1322 aa20.88■□□□□ 0.93
NCK1-202ENST00000460960 MARCH10Q8NA82 808 aaPredicted RBP20.87■□□□□ 0.93
NCK1-202ENST00000460960 PDGFDQ9GZP0 370 aaPredicted RBP20.87■□□□□ 0.93
NCK1-202ENST00000460960 AXIN2Q9Y2T1 843 aa20.87■□□□□ 0.93
NCK1-202ENST00000460960 COL18A1P39060 1754 aa20.87■□□□□ 0.93
NCK1-202ENST00000460960 RGPD5Q99666 1765 aa20.87■□□□□ 0.93
NCK1-202ENST00000460960 CASZ1Q86V15 1759 aa20.86■□□□□ 0.93
NCK1-202ENST00000460960 CPSF1Q10570 1443 aaKnown RBP20.86■□□□□ 0.93
NCK1-202ENST00000460960 EVC2Q86UK5 1308 aa20.85■□□□□ 0.93
NCK1-202ENST00000460960 CDCA7Q9BWT1 371 aaPredicted RBP20.85■□□□□ 0.93
NCK1-202ENST00000460960 ATF5Q9Y2D1 282 aaPredicted RBP20.85■□□□□ 0.93
NCK1-202ENST00000460960 STK32BQ9NY57 414 aa20.84■□□□□ 0.93
NCK1-202ENST00000460960 MYOM1P52179 1685 aa20.83■□□□□ 0.92
NCK1-202ENST00000460960 TTC21BQ7Z4L5 1316 aa20.82■□□□□ 0.92
NCK1-202ENST00000460960 ARHGEF25Q86VW2 580 aa20.82■□□□□ 0.92
NCK1-202ENST00000460960 PROM2Q8N271 834 aa20.82■□□□□ 0.92
NCK1-202ENST00000460960 KCNH5Q8NCM2 988 aa20.82■□□□□ 0.92
NCK1-202ENST00000460960 EXOC5O00471 708 aa20.81■□□□□ 0.92
NCK1-202ENST00000460960 TXNRD1Q16881 649 aa20.81■□□□□ 0.92
NCK1-202ENST00000460960 CARD10Q9BWT7 1032 aa20.81■□□□□ 0.92
NCK1-202ENST00000460960 ROCK2O75116 1388 aaKnown RBP20.81■□□□□ 0.92
NCK1-202ENST00000460960 ZNF692Q9BU19 519 aaPredicted RBP20.78■□□□□ 0.92
NCK1-202ENST00000460960 TIMELESSQ9UNS1 1208 aa20.78■□□□□ 0.92
NCK1-202ENST00000460960 PTGER2P43116 358 aa20.77■□□□□ 0.92
NCK1-202ENST00000460960 SLC15A2Q16348 729 aa20.77■□□□□ 0.92
NCK1-202ENST00000460960 ACSBG1Q96GR2 724 aa20.77■□□□□ 0.92
NCK1-202ENST00000460960 BCL9O00512 1426 aa20.77■□□□□ 0.91
NCK1-202ENST00000460960 TTC21AQ8NDW8 1320 aa20.77■□□□□ 0.91
NCK1-202ENST00000460960 CCDC7Q96M83 1385 aa20.76■□□□□ 0.91
NCK1-202ENST00000460960 KTN1Q86UP2 1357 aaKnown RBP20.75■□□□□ 0.91
NCK1-202ENST00000460960 KAT6BQ8WYB5 2073 aa20.75■□□□□ 0.91
NCK1-202ENST00000460960 FHDC1Q9C0D6 1143 aaPredicted RBP20.75■□□□□ 0.91
NCK1-202ENST00000460960 TNS2Q63HR2 1409 aa20.75■□□□□ 0.91
NCK1-202ENST00000460960 NFAT5O94916 1531 aa20.74■□□□□ 0.91
NCK1-202ENST00000460960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.74■□□□□ 0.918e-7■■□□□ 13.2
NCK1-202ENST00000460960 MTFR1LQ9H019 292 aa20.73■□□□□ 0.91
NCK1-202ENST00000460960 NLRP2Q9NX02 1062 aa20.73■□□□□ 0.91
NCK1-202ENST00000460960 SYT17Q9BSW7 474 aa20.72■□□□□ 0.91
NCK1-202ENST00000460960 NHSQ6T4R5 1651 aa20.72■□□□□ 0.91
NCK1-202ENST00000460960 ZNF784Q8NCA9 323 aaPredicted RBP20.71■□□□□ 0.91
NCK1-202ENST00000460960 CARD11Q9BXL7 1154 aa20.71■□□□□ 0.91
NCK1-202ENST00000460960 MON2Q7Z3U7 1717 aa20.68■□□□□ 0.9
NCK1-202ENST00000460960 ABCC6O95255 1503 aa20.68■□□□□ 0.9
NCK1-202ENST00000460960 LTN1O94822 1766 aa20.67■□□□□ 0.9
NCK1-202ENST00000460960 IL2RBP14784 551 aa20.67■□□□□ 0.9
NCK1-202ENST00000460960 NME9Q86XW9 330 aa20.67■□□□□ 0.9
NCK1-202ENST00000460960 KLHL34Q8N239 644 aa20.67■□□□□ 0.9
NCK1-202ENST00000460960 TMC1Q8TDI8 760 aa20.67■□□□□ 0.9
NCK1-202ENST00000460960 ARXQ96QS3 562 aa20.67■□□□□ 0.9
NCK1-202ENST00000460960 ERBB3P21860 1342 aa20.67■□□□□ 0.9
NCK1-202ENST00000460960 BTAF1O14981 1849 aa20.67■□□□□ 0.9
NCK1-202ENST00000460960 CHD4Q14839 1912 aa20.66■□□□□ 0.9
NCK1-202ENST00000460960 ANKRD24Q8TF21 1146 aa20.65■□□□□ 0.9
NCK1-202ENST00000460960 SGIP1Q9BQI5 828 aa20.64■□□□□ 0.89
NCK1-202ENST00000460960 ZNF827Q17R98 1081 aa20.63■□□□□ 0.89
NCK1-202ENST00000460960 GPR162Q16538 588 aa20.62■□□□□ 0.89
NCK1-202ENST00000460960 HDGFL2Q7Z4V5 671 aaPredicted RBP20.62■□□□□ 0.89
NCK1-202ENST00000460960 PAPPAQ13219 1627 aa20.62■□□□□ 0.89
NCK1-202ENST00000460960 USP31Q70CQ4 1352 aa20.61■□□□□ 0.89
NCK1-202ENST00000460960 USP47Q96K76 1375 aa20.61■□□□□ 0.89
NCK1-202ENST00000460960 SENP3-EIF4A1A0A087X0R7 540 aa20.61■□□□□ 0.89
NCK1-202ENST00000460960 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
NCK1-202ENST00000460960 LTV1Q96GA3 475 aaPredicted RBP20.61■□□□□ 0.89
NCK1-202ENST00000460960 DDX54Q8TDD1 881 aaKnown RBP20.6■□□□□ 0.89
NCK1-202ENST00000460960 USP54Q70EL1 1684 aa20.59■□□□□ 0.89
NCK1-202ENST00000460960 LRRC4BQ9NT99 713 aa20.59■□□□□ 0.89
NCK1-202ENST00000460960 SBNO2Q9Y2G9 1366 aa20.59■□□□□ 0.89
NCK1-202ENST00000460960 ST20-MTHFSA0A0A6YYL1 179 aa20.58■□□□□ 0.89
NCK1-202ENST00000460960 SYTL4Q96C24 671 aaPredicted RBP20.58■□□□□ 0.89
NCK1-202ENST00000460960 POLD1P28340 1107 aa20.57■□□□□ 0.88
NCK1-202ENST00000460960 SLC12A5Q9H2X9 1139 aa20.57■□□□□ 0.88
NCK1-202ENST00000460960 CD163L1Q9NR16 1453 aa20.56■□□□□ 0.88
NCK1-202ENST00000460960 UTRNP46939 3433 aa20.56■□□□□ 0.88
NCK1-202ENST00000460960 TESK2Q96S53 571 aa20.56■□□□□ 0.88
NCK1-202ENST00000460960 EDC4Q6P2E9 1401 aaKnown RBP20.55■□□□□ 0.88
NCK1-202ENST00000460960 KCNQ4P56696 695 aa20.55■□□□□ 0.88
NCK1-202ENST00000460960 C1QTNF8P60827 252 aa20.55■□□□□ 0.88
NCK1-202ENST00000460960 MAP3K5Q99683 1374 aa20.55■□□□□ 0.88
NCK1-202ENST00000460960 TERF2IPQ9NYB0 399 aa20.54■□□□□ 0.88
NCK1-202ENST00000460960 TFCP2L1Q9NZI6 479 aa20.54■□□□□ 0.88
NCK1-202ENST00000460960 SLC27A3Q5K4L6 730 aa20.53■□□□□ 0.88
NCK1-202ENST00000460960 AKT1S1Q96B36 256 aa20.53■□□□□ 0.88
NCK1-202ENST00000460960 A0A1W2PP64 1363 aa20.52■□□□□ 0.88
NCK1-202ENST00000460960 SLC16A10Q8TF71 515 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms