RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 Q6ZVU0 165 aa8.45□□□□□ -1.06
CCDC58-202ENST00000460810 SLC24A3Q9HC58 644 aa8.45□□□□□ -1.06
CCDC58-202ENST00000460810 CTDSPL2Q05D32 466 aa8.44□□□□□ -1.06
CCDC58-202ENST00000460810 PPP1R26Q5T8A7 1209 aaPredicted RBP8.44□□□□□ -1.06
CCDC58-202ENST00000460810 CARD14Q9BXL6 1004 aa8.44□□□□□ -1.06
CCDC58-202ENST00000460810 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
CCDC58-202ENST00000460810 SPINT1O43278 529 aa8.42□□□□□ -1.06
CCDC58-202ENST00000460810 PTSQ03393 145 aa8.42□□□□□ -1.06
CCDC58-202ENST00000460810 DHX9Q08211 1270 aaKnown RBP8.42□□□□□ -1.06
CCDC58-202ENST00000460810 KCNMA1Q12791 1236 aa8.42□□□□□ -1.06
CCDC58-202ENST00000460810 NANOS1Q8WY41 292 aaKnown RBP8.42□□□□□ -1.06
CCDC58-202ENST00000460810 ARHGAP9Q9BRR9 750 aa8.42□□□□□ -1.06
CCDC58-202ENST00000460810 FKBPLQ9UIM3 349 aa8.42□□□□□ -1.06
CCDC58-202ENST00000460810 ZC3H4Q9UPT8 1303 aaKnown RBP8.42□□□□□ -1.06
CCDC58-202ENST00000460810 SLC10A4Q96EP9 437 aa8.41□□□□□ -1.06
CCDC58-202ENST00000460810 KCTD15Q96SI1 283 aaPredicted RBP8.41□□□□□ -1.06
CCDC58-202ENST00000460810 ZBTB33Q86T24 672 aa8.4□□□□□ -1.06
CCDC58-202ENST00000460810 CBLBQ13191 982 aa8.39□□□□□ -1.07
CCDC58-202ENST00000460810 SKIV2LQ15477 1246 aaKnown RBP8.39□□□□□ -1.07
CCDC58-202ENST00000460810 GPR161Q8N6U8 529 aaKnown RBP8.39□□□□□ -1.07
CCDC58-202ENST00000460810 GPSM3Q9Y4H4 160 aa8.39□□□□□ -1.07
CCDC58-202ENST00000460810 FIGNL2A6NMB9 653 aa8.38□□□□□ -1.07
CCDC58-202ENST00000460810 KRT76Q01546 638 aa8.38□□□□□ -1.07
CCDC58-202ENST00000460810 LRRN4Q8WUT4 740 aa8.38□□□□□ -1.07
CCDC58-202ENST00000460810 SLC35F4A4IF30 521 aa8.37□□□□□ -1.07
CCDC58-202ENST00000460810 PTK2Q05397 1052 aa8.37□□□□□ -1.07
CCDC58-202ENST00000460810 PPP2R2DQ66LE6 453 aa8.37□□□□□ -1.07
CCDC58-202ENST00000460810 CCDC155Q8N6L0 562 aa8.37□□□□□ -1.07
CCDC58-202ENST00000460810 CNTNAP3BQ96NU0 1288 aa8.37□□□□□ -1.07
CCDC58-202ENST00000460810 CNTNAP3Q9BZ76 1288 aa8.37□□□□□ -1.07
CCDC58-202ENST00000460810 GSK3AP49840 483 aa8.36□□□□□ -1.07
CCDC58-202ENST00000460810 NR6A1Q15406 480 aa8.36□□□□□ -1.07
CCDC58-202ENST00000460810 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC58-202ENST00000460810 SH3D19Q5HYK7 790 aa8.35□□□□□ -1.07
CCDC58-202ENST00000460810 INTS6LQ5JSJ4 861 aaKnown RBP8.35□□□□□ -1.07
CCDC58-202ENST00000460810 COL25A1Q9BXS0 654 aaPredicted RBP8.35□□□□□ -1.07
CCDC58-202ENST00000460810 RNF225M0QZC1 329 aaPredicted RBP8.34□□□□□ -1.07
CCDC58-202ENST00000460810 OCSTAMPQ9BR26 566 aa8.34□□□□□ -1.07
CCDC58-202ENST00000460810 ITGA6P23229 1130 aa8.33□□□□□ -1.08
CCDC58-202ENST00000460810 NBPF20Q3BBV1 942 aa8.33□□□□□ -1.08
CCDC58-202ENST00000460810 PNMA1Q8ND90 353 aa8.33□□□□□ -1.08
CCDC58-202ENST00000460810 ADAMTS8Q9UP79 889 aa8.33□□□□□ -1.08
CCDC58-202ENST00000460810 CTSOP43234 321 aaPredicted RBP8.32□□□□□ -1.08
CCDC58-202ENST00000460810 RELBQ01201 579 aa8.32□□□□□ -1.08
CCDC58-202ENST00000460810 TMEM151AQ8N4L1 468 aa8.32□□□□□ -1.08
CCDC58-202ENST00000460810 ADAM32Q8TC27 787 aa8.32□□□□□ -1.08
CCDC58-202ENST00000460810 DDRGK1Q96HY6 314 aa8.32□□□□□ -1.08
CCDC58-202ENST00000460810 AGBL1Q96MI9 1066 aa8.32□□□□□ -1.08
CCDC58-202ENST00000460810 LOC100996750A0A140TA64 210 aa8.31□□□□□ -1.08
CCDC58-202ENST00000460810 SLURP2P0DP57 97 aa8.31□□□□□ -1.08
CCDC58-202ENST00000460810 FBXO31Q5XUX0 539 aaPredicted RBP8.31□□□□□ -1.08
CCDC58-202ENST00000460810 SV2AQ7L0J3 742 aa8.31□□□□□ -1.08
CCDC58-202ENST00000460810 PROCA1Q8NCQ7 364 aaPredicted RBP8.31□□□□□ -1.08
CCDC58-202ENST00000460810 INSM2Q96T92 566 aaPredicted RBP8.31□□□□□ -1.08
CCDC58-202ENST00000460810 KRTAP4-6Q9BYQ5 205 aa8.31□□□□□ -1.08
CCDC58-202ENST00000460810 GDF11O95390 407 aa8.3□□□□□ -1.08
CCDC58-202ENST00000460810 RASSF7Q02833 373 aa8.3□□□□□ -1.08
CCDC58-202ENST00000460810 TPRNQ4KMQ1 711 aa8.3□□□□□ -1.08
CCDC58-202ENST00000460810 ZNF385CQ66K41 422 aaPredicted RBP8.3□□□□□ -1.08
CCDC58-202ENST00000460810 VWA5B2Q8N398 1253 aa8.3□□□□□ -1.08
CCDC58-202ENST00000460810 TRIM52Q96A61 297 aa8.3□□□□□ -1.08
CCDC58-202ENST00000460810 POLMQ9NP87 494 aaPredicted RBP8.3□□□□□ -1.08
CCDC58-202ENST00000460810 AP1G2O75843 785 aa8.29□□□□□ -1.08
CCDC58-202ENST00000460810 RNFT1Q5M7Z0 435 aa8.29□□□□□ -1.08
CCDC58-202ENST00000460810 KCTD17Q8N5Z5 321 aa8.29□□□□□ -1.08
CCDC58-202ENST00000460810 RNF217Q8TC41 542 aa8.29□□□□□ -1.08
CCDC58-202ENST00000460810 KDM4CQ9H3R0 1056 aa8.29□□□□□ -1.08
CCDC58-202ENST00000460810 CDC14CA4D256 554 aa8.28□□□□□ -1.08
CCDC58-202ENST00000460810 ADH1AP07327 375 aa8.28□□□□□ -1.08
CCDC58-202ENST00000460810 SVOPQ8N4V2 548 aa8.28□□□□□ -1.08
CCDC58-202ENST00000460810 ZNF784Q8NCA9 323 aaPredicted RBP8.28□□□□□ -1.08
CCDC58-202ENST00000460810 ZNF395Q9H8N7 513 aaPredicted RBP8.28□□□□□ -1.08
CCDC58-202ENST00000460810 TMPRSS4Q9NRS4 437 aa8.28□□□□□ -1.08
CCDC58-202ENST00000460810 ATP1B4Q9UN42 357 aaPredicted RBP8.28□□□□□ -1.08
CCDC58-202ENST00000460810 SENP3-EIF4A1A0A087X0R7 540 aa8.27□□□□□ -1.09
CCDC58-202ENST00000460810 LILRA1O75019 489 aa8.27□□□□□ -1.09
CCDC58-202ENST00000460810 PTGIRP43119 386 aa8.27□□□□□ -1.09
CCDC58-202ENST00000460810 DZIP3Q86Y13 1208 aaKnown RBP8.27□□□□□ -1.09
CCDC58-202ENST00000460810 FAM117AQ9C073 453 aa8.27□□□□□ -1.09
CCDC58-202ENST00000460810 ESPNB1AK53 854 aa8.26□□□□□ -1.09
CCDC58-202ENST00000460810 ERVH48-1M5A8F1 160 aa8.26□□□□□ -1.09
CCDC58-202ENST00000460810 ARHGEF15O94989 841 aa8.26□□□□□ -1.09
CCDC58-202ENST00000460810 SUZ12Q15022 739 aaKnown RBP8.26□□□□□ -1.09
CCDC58-202ENST00000460810 SEPT12Q8IYM1 358 aa8.26□□□□□ -1.09
CCDC58-202ENST00000460810 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
CCDC58-202ENST00000460810 ADD1P35611 737 aaKnown RBP8.25□□□□□ -1.09
CCDC58-202ENST00000460810 KDF1Q8NAX2 398 aaPredicted RBP8.25□□□□□ -1.09
CCDC58-202ENST00000460810 USP17L8P0C7I0 530 aa8.24□□□□□ -1.09
CCDC58-202ENST00000460810 FOXD4L5Q5VV16 416 aaPredicted RBP8.24□□□□□ -1.09
CCDC58-202ENST00000460810 LYSMD3Q7Z3D4 306 aa8.24□□□□□ -1.09
CCDC58-202ENST00000460810 WHAMMQ8TF30 809 aa8.24□□□□□ -1.09
CCDC58-202ENST00000460810 GPBP1L1Q9HC44 474 aaPredicted RBP8.24□□□□□ -1.09
CCDC58-202ENST00000460810 HMX1Q9NP08 348 aaPredicted RBP8.24□□□□□ -1.09
CCDC58-202ENST00000460810 RAB15P59190 212 aa8.23□□□□□ -1.09
CCDC58-202ENST00000460810 SRSF11Q05519 484 aaKnown RBP8.23□□□□□ -1.09
CCDC58-202ENST00000460810 RNF144AP50876 292 aaPredicted RBP8.22□□□□□ -1.09
CCDC58-202ENST00000460810 CCDC125Q86Z20 511 aa8.22□□□□□ -1.09
CCDC58-202ENST00000460810 GMCL1Q96IK5 515 aa8.22□□□□□ -1.09
CCDC58-202ENST00000460810 ADAMTS2O95450 1211 aa8.21□□□□□ -1.1
CCDC58-202ENST00000460810 MARSP56192 900 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms