RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 SLC24A1O60721 1099 aa6.6□□□□□ -1.35
SYPL1-203ENST00000460770 AP1G2O75843 785 aa6.6□□□□□ -1.35
SYPL1-203ENST00000460770 NR3C2P08235 984 aa6.6□□□□□ -1.35
SYPL1-203ENST00000460770 ERFEQ4G0M1 354 aa6.6□□□□□ -1.35
SYPL1-203ENST00000460770 C6orf118Q5T5N4 469 aa6.6□□□□□ -1.35
SYPL1-203ENST00000460770 LINC00528Q8N1L1 170 aa6.6□□□□□ -1.35
SYPL1-203ENST00000460770 MEIOBQ8N635 442 aa6.6□□□□□ -1.35
SYPL1-203ENST00000460770 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.6□□□□□ -1.35
SYPL1-203ENST00000460770 GPBP1L1Q9HC44 474 aaPredicted RBP6.6□□□□□ -1.35
SYPL1-203ENST00000460770 LRRN4Q8WUT4 740 aa6.59□□□□□ -1.35
SYPL1-203ENST00000460770 FAM117AQ9C073 453 aa6.59□□□□□ -1.35
SYPL1-203ENST00000460770 NBPF20Q3BBV1 942 aa6.58□□□□□ -1.36
SYPL1-203ENST00000460770 PCMTD1Q96MG8 357 aaPredicted RBP6.58□□□□□ -1.36
SYPL1-203ENST00000460770 GOPCQ9HD26 462 aa6.58□□□□□ -1.36
SYPL1-203ENST00000460770 NR6A1Q15406 480 aa6.57□□□□□ -1.36
SYPL1-203ENST00000460770 PROCA1Q8NCQ7 364 aaPredicted RBP6.57□□□□□ -1.36
SYPL1-203ENST00000460770 KCTD15Q96SI1 283 aaPredicted RBP6.57□□□□□ -1.36
SYPL1-203ENST00000460770 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.56□□□□□ -1.36
SYPL1-203ENST00000460770 TMEM259Q4ZIN3 620 aa6.56□□□□□ -1.36
SYPL1-203ENST00000460770 PPP1R26Q5T8A7 1209 aaPredicted RBP6.56□□□□□ -1.36
SYPL1-203ENST00000460770 GMPRP36959 345 aa6.55□□□□□ -1.36
SYPL1-203ENST00000460770 ZSCAN1Q8NBB4 408 aa6.55□□□□□ -1.36
SYPL1-203ENST00000460770 SOS2Q07890 1332 aaPredicted RBP6.54□□□□□ -1.36
SYPL1-203ENST00000460770 TTLL8A6PVC2 850 aa6.54□□□□□ -1.36
SYPL1-203ENST00000460770 USP17L8P0C7I0 530 aa6.54□□□□□ -1.36
SYPL1-203ENST00000460770 VSIG8P0DPA2 414 aa6.54□□□□□ -1.36
SYPL1-203ENST00000460770 VEGFBP49765 207 aa6.54□□□□□ -1.36
SYPL1-203ENST00000460770 ZNF592Q92610 1267 aa6.54□□□□□ -1.36
SYPL1-203ENST00000460770 RFC5P40937 340 aa6.53□□□□□ -1.36
SYPL1-203ENST00000460770 Q6ZVU0 165 aa6.53□□□□□ -1.36
SYPL1-203ENST00000460770 DZIP3Q86Y13 1208 aaKnown RBP6.53□□□□□ -1.36
SYPL1-203ENST00000460770 ADAM32Q8TC27 787 aa6.53□□□□□ -1.36
SYPL1-203ENST00000460770 SOBPA7XYQ1 873 aa6.52□□□□□ -1.37
SYPL1-203ENST00000460770 APBB1O00213 710 aa6.52□□□□□ -1.37
SYPL1-203ENST00000460770 CCDC125Q86Z20 511 aa6.52□□□□□ -1.37
SYPL1-203ENST00000460770 SPINT1O43278 529 aa6.51□□□□□ -1.37
SYPL1-203ENST00000460770 NEUROD2Q15784 382 aa6.51□□□□□ -1.37
SYPL1-203ENST00000460770 INTS6LQ5JSJ4 861 aaKnown RBP6.51□□□□□ -1.37
SYPL1-203ENST00000460770 LCE2CQ5TA81 110 aa6.51□□□□□ -1.37
SYPL1-203ENST00000460770 SEPT12Q8IYM1 358 aa6.51□□□□□ -1.37
SYPL1-203ENST00000460770 DNMT3LQ9UJW3 386 aa6.51□□□□□ -1.37
SYPL1-203ENST00000460770 ERBB4Q15303 1308 aa6.5□□□□□ -1.37
SYPL1-203ENST00000460770 PPFIA3O75145 1194 aa6.5□□□□□ -1.37
SYPL1-203ENST00000460770 MCCD1P59942 119 aaPredicted RBP6.49□□□□□ -1.37
SYPL1-203ENST00000460770 CBLBQ13191 982 aa6.49□□□□□ -1.37
SYPL1-203ENST00000460770 ZNF330Q9Y3S2 320 aaPredicted RBP6.49□□□□□ -1.37
SYPL1-203ENST00000460770 ZBBXA8MT70 800 aa6.47□□□□□ -1.37
SYPL1-203ENST00000460770 RAB15P59190 212 aa6.47□□□□□ -1.37
SYPL1-203ENST00000460770 RELBQ01201 579 aa6.47□□□□□ -1.37
SYPL1-203ENST00000460770 PTSQ03393 145 aa6.47□□□□□ -1.37
SYPL1-203ENST00000460770 RNF20Q5VTR2 975 aa6.47□□□□□ -1.37
SYPL1-203ENST00000460770 IL27Q8NEV9 243 aa6.47□□□□□ -1.37
SYPL1-203ENST00000460770 HMX1Q9NP08 348 aaPredicted RBP6.47□□□□□ -1.37
SYPL1-203ENST00000460770 POLMQ9NP87 494 aaPredicted RBP6.47□□□□□ -1.37
SYPL1-203ENST00000460770 FIGNL2A6NMB9 653 aa6.46□□□□□ -1.38
SYPL1-203ENST00000460770 ADH1AP07327 375 aa6.46□□□□□ -1.38
SYPL1-203ENST00000460770 FBXO31Q5XUX0 539 aaPredicted RBP6.46□□□□□ -1.38
SYPL1-203ENST00000460770 EPS8L1Q8TE68 723 aa6.46□□□□□ -1.38
SYPL1-203ENST00000460770 OCSTAMPQ9BR26 566 aa6.46□□□□□ -1.38
SYPL1-203ENST00000460770 ZNF784Q8NCA9 323 aaPredicted RBP6.45□□□□□ -1.38
SYPL1-203ENST00000460770 BANK1Q8NDB2 785 aa6.45□□□□□ -1.38
SYPL1-203ENST00000460770 ESF1Q9H501 851 aaKnown RBP6.45□□□□□ -1.38
SYPL1-203ENST00000460770 PCDHB9Q9Y5E1 797 aa6.45□□□□□ -1.38
SYPL1-203ENST00000460770 ESPNB1AK53 854 aa6.44□□□□□ -1.38
SYPL1-203ENST00000460770 ERVH48-1M5A8F1 160 aa6.44□□□□□ -1.38
SYPL1-203ENST00000460770 SOCS7O14512 581 aa6.44□□□□□ -1.38
SYPL1-203ENST00000460770 CCDC155Q8N6L0 562 aa6.44□□□□□ -1.38
SYPL1-203ENST00000460770 AGBL1Q96MI9 1066 aa6.44□□□□□ -1.38
SYPL1-203ENST00000460770 INSM2Q96T92 566 aaPredicted RBP6.44□□□□□ -1.38
SYPL1-203ENST00000460770 TRIM34Q9BYJ4 488 aa6.44□□□□□ -1.38
SYPL1-203ENST00000460770 PTGIRP43119 386 aa6.43□□□□□ -1.38
SYPL1-203ENST00000460770 NANOS1Q8WY41 292 aaKnown RBP6.43□□□□□ -1.38
SYPL1-203ENST00000460770 ZNF395Q9H8N7 513 aaPredicted RBP6.43□□□□□ -1.38
SYPL1-203ENST00000460770 PRM3Q9NNZ6 103 aa6.43□□□□□ -1.38
SYPL1-203ENST00000460770 TMPRSS4Q9NRS4 437 aa6.43□□□□□ -1.38
SYPL1-203ENST00000460770 CTSOP43234 321 aaPredicted RBP6.42□□□□□ -1.38
SYPL1-203ENST00000460770 SV2AQ7L0J3 742 aa6.42□□□□□ -1.38
SYPL1-203ENST00000460770 NDUFB9Q9Y6M9 179 aa6.42□□□□□ -1.38
SYPL1-203ENST00000460770 SLC35F4A4IF30 521 aa6.41□□□□□ -1.38
SYPL1-203ENST00000460770 ATP5J2-PTCD1G3V325 749 aa6.41□□□□□ -1.38
SYPL1-203ENST00000460770 ITGA6P23229 1130 aa6.41□□□□□ -1.38
SYPL1-203ENST00000460770 NR1H3Q13133 447 aa6.41□□□□□ -1.38
SYPL1-203ENST00000460770 LYSMD3Q7Z3D4 306 aa6.41□□□□□ -1.38
SYPL1-203ENST00000460770 RNF217Q8TC41 542 aa6.41□□□□□ -1.38
SYPL1-203ENST00000460770 CYLDQ9NQC7 956 aa6.41□□□□□ -1.38
SYPL1-203ENST00000460770 CDC14CA4D256 554 aa6.4□□□□□ -1.38
SYPL1-203ENST00000460770 RNF225M0QZC1 329 aaPredicted RBP6.4□□□□□ -1.38
SYPL1-203ENST00000460770 LILRA1O75019 489 aa6.4□□□□□ -1.38
SYPL1-203ENST00000460770 FBXO45P0C2W1 286 aa6.4□□□□□ -1.38
SYPL1-203ENST00000460770 FOXR1Q6PIV2 292 aa6.4□□□□□ -1.38
SYPL1-203ENST00000460770 LORP23490 312 aaPredicted RBP6.39□□□□□ -1.39
SYPL1-203ENST00000460770 GPC1P35052 558 aa6.39□□□□□ -1.39
SYPL1-203ENST00000460770 BRPF1P55201 1214 aaPredicted RBP6.39□□□□□ -1.39
SYPL1-203ENST00000460770 CC2D2BQ6DHV5 1058 aa6.39□□□□□ -1.39
SYPL1-203ENST00000460770 CYP2U1Q7Z449 544 aa6.39□□□□□ -1.39
SYPL1-203ENST00000460770 GMCL1Q96IK5 515 aa6.39□□□□□ -1.39
SYPL1-203ENST00000460770 GJD4Q96KN9 370 aaPredicted RBP6.39□□□□□ -1.39
SYPL1-203ENST00000460770 CNTNAP3BQ96NU0 1288 aa6.39□□□□□ -1.39
SYPL1-203ENST00000460770 NLRP3Q96P20 1036 aa6.39□□□□□ -1.39
SYPL1-203ENST00000460770 CNTNAP3Q9BZ76 1288 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms