RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 CDR1P51861 262 aa11.94□□□□□ -0.5
UFD1-205ENST00000459854 DHX8Q14562 1220 aaKnown RBP11.94□□□□□ -0.5
UFD1-205ENST00000459854 SLAIN2Q9P270 581 aa11.93□□□□□ -0.5
UFD1-205ENST00000459854 NAP1L2Q9ULW6 460 aaPredicted RBP11.93□□□□□ -0.5
UFD1-205ENST00000459854 TPM1P09493 284 aa11.93□□□□□ -0.5
UFD1-205ENST00000459854 GPATCH3Q96I76 525 aa11.93□□□□□ -0.5
UFD1-205ENST00000459854 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
UFD1-205ENST00000459854 ADAMTS13Q76LX8 1427 aa11.92□□□□□ -0.5
UFD1-205ENST00000459854 KRT28Q7Z3Y7 464 aa11.92□□□□□ -0.5
UFD1-205ENST00000459854 RRP1P56182 461 aaKnown RBP11.92□□□□□ -0.5
UFD1-205ENST00000459854 CCDC173Q0VFZ6 552 aa11.92□□□□□ -0.5
UFD1-205ENST00000459854 NFKBIBQ15653 356 aa11.91□□□□□ -0.5
UFD1-205ENST00000459854 ITPRIPQ8IWB1 547 aa11.91□□□□□ -0.5
UFD1-205ENST00000459854 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
UFD1-205ENST00000459854 WASHC2AQ641Q2 1341 aa11.91□□□□□ -0.5
UFD1-205ENST00000459854 SBNO2Q9Y2G9 1366 aa11.91□□□□□ -0.5
UFD1-205ENST00000459854 A0A0G2JS52 829 aa11.91□□□□□ -0.5
UFD1-205ENST00000459854 ERCC4Q92889 916 aaPredicted RBP11.91□□□□□ -0.5
UFD1-205ENST00000459854 CCDC9Q9Y3X0 531 aaKnown RBP11.91□□□□□ -0.5
UFD1-205ENST00000459854 SIGLEC1Q9BZZ2 1709 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 PTCH1Q13635 1447 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 ACEP12821 1306 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 AK7Q96M32 723 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 PPIP5K1Q6PFW1 1433 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 LETM1O95202 739 aaPredicted RBP11.9□□□□□ -0.5
UFD1-205ENST00000459854 EVA1CP58658 441 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 XPCQ01831 940 aaPredicted RBP11.9□□□□□ -0.5
UFD1-205ENST00000459854 TSR1Q2NL82 804 aaKnown RBP11.9□□□□□ -0.5
UFD1-205ENST00000459854 CERKQ8TCT0 537 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 CAVIN1Q6NZI2 390 aaKnown RBP11.89□□□□□ -0.51
UFD1-205ENST00000459854 PLEKHH1Q9ULM0 1364 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 BECN2A8MW95 431 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 SETBP1Q9Y6X0 1596 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 KCNH5Q8NCM2 988 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 UBE2Q2Q8WVN8 375 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 NKTRP30414 1462 aaKnown RBP11.89□□□□□ -0.51
UFD1-205ENST00000459854 U2SURPO15042 1029 aaKnown RBP11.89□□□□□ -0.51
UFD1-205ENST00000459854 HSP90B2PQ58FF3 399 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 TESK2Q96S53 571 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 NUTM2GQ5VZR2 741 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 LRRC59Q96AG4 307 aaKnown RBP11.88□□□□□ -0.51
UFD1-205ENST00000459854 KDM5AP29375 1690 aaKnown RBP11.88□□□□□ -0.51
UFD1-205ENST00000459854 MED14O60244 1454 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 NRXN1Q9ULB1 1477 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 MYBBP1AQ9BQG0 1328 aaKnown RBP11.88□□□□□ -0.51
UFD1-205ENST00000459854 ADGRL3Q9HAR2 1447 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 GGNBP2Q9H3C7 697 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 TTC21AQ8NDW8 1320 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 NCOA3Q9Y6Q9 1424 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 RDXP35241 583 aaKnown RBP11.88□□□□□ -0.51
UFD1-205ENST00000459854 USP8P40818 1118 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 DISP3Q9P2K9 1392 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 PDCL2Q8N4E4 241 aa11.87□□□□□ -0.51
UFD1-205ENST00000459854 CCP110O43303 1012 aa11.87□□□□□ -0.51
UFD1-205ENST00000459854 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
UFD1-205ENST00000459854 NUTM2BA6NNL0 878 aaPredicted RBP11.86□□□□□ -0.51
UFD1-205ENST00000459854 NUTM2EB1AL46 878 aaPredicted RBP11.86□□□□□ -0.51
UFD1-205ENST00000459854 NUTM2AQ8IVF1 878 aaPredicted RBP11.86□□□□□ -0.51
UFD1-205ENST00000459854 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
UFD1-205ENST00000459854 PPLO60437 1756 aa11.86□□□□□ -0.51
UFD1-205ENST00000459854 DCTN1Q14203 1278 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 CPS1P31327 1500 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 DLC1Q96QB1 1528 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 IQGAP1P46940 1657 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 REC8O95072 547 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 R3HCC1Q9Y3T6 440 aaKnown RBP11.85□□□□□ -0.51
UFD1-205ENST00000459854 ANKRD36BQ8N2N9 1353 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 NSD3Q9BZ95 1437 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 ORAI2Q96SN7 254 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 MNS1Q8NEH6 495 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 ZNF142P52746 1687 aaPredicted RBP11.85□□□□□ -0.51
UFD1-205ENST00000459854 PLEKHG3A1L390 1219 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 MBD3O95983 291 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 PRDM11Q9NQV5 511 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 ANKARQ7Z5J8 1434 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 LMOD3Q0VAK6 560 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 CCDC191Q8NCU4 936 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 E9PSI1 815 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 PHF23Q9BUL5 403 aaPredicted RBP11.84□□□□□ -0.51
UFD1-205ENST00000459854 TRPM1Q7Z4N2 1603 aa11.83□□□□□ -0.52
UFD1-205ENST00000459854 TECPR2O15040 1411 aa11.83□□□□□ -0.52
UFD1-205ENST00000459854 LTV1Q96GA3 475 aaPredicted RBP11.83□□□□□ -0.52
UFD1-205ENST00000459854 SMC4Q9NTJ3 1288 aa11.83□□□□□ -0.52
UFD1-205ENST00000459854 NSD2O96028 1365 aa11.83□□□□□ -0.52
UFD1-205ENST00000459854 RRP12Q5JTH9 1297 aaKnown RBP11.83□□□□□ -0.52
UFD1-205ENST00000459854 KIAA1210Q9ULL0 1709 aa11.83□□□□□ -0.52
UFD1-205ENST00000459854 IPO7O95373 1038 aaKnown RBP11.83□□□□□ -0.52
UFD1-205ENST00000459854 TTC21BQ7Z4L5 1316 aa11.82□□□□□ -0.52
UFD1-205ENST00000459854 LEKR1Q6ZMV7 388 aa11.82□□□□□ -0.52
UFD1-205ENST00000459854 SF3A1Q15459 793 aaKnown RBP11.82□□□□□ -0.52
UFD1-205ENST00000459854 BRD4O60885 1362 aaPredicted RBP11.82□□□□□ -0.52
UFD1-205ENST00000459854 CEP89Q96ST8 783 aa11.82□□□□□ -0.52
UFD1-205ENST00000459854 RUFY1Q96T51 708 aa11.82□□□□□ -0.52
UFD1-205ENST00000459854 HOOK1Q9UJC3 728 aaKnown RBP11.81□□□□□ -0.52
UFD1-205ENST00000459854 ARHGEF10O15013 1369 aa11.81□□□□□ -0.52
UFD1-205ENST00000459854 SENP3-EIF4A1A0A087X0R7 540 aa11.81□□□□□ -0.52
UFD1-205ENST00000459854 U2AF1L5P0DN76 240 aaPredicted RBP11.81□□□□□ -0.52
UFD1-205ENST00000459854 U2AF1Q01081 240 aaKnown RBP eCLIP11.81□□□□□ -0.527e-9■■■□□ 15.8
UFD1-205ENST00000459854 PTPRUQ92729 1446 aa11.81□□□□□ -0.52
UFD1-205ENST00000459854 ANKRD20A12PQ8NF67 263 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms