RNA–Protein interactions for RNA: ENST00000459688.1

EGFR-208, Transcript of epidermal growth factor receptor, humanhuman

TSL 3

Gene EGFR, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-208ENST00000459688 AXIN2Q9Y2T1 843 aa22.36■■□□□ 1.17
EGFR-208ENST00000459688 COL18A1P39060 1754 aa22.35■■□□□ 1.17
EGFR-208ENST00000459688 FBLN1P23142 703 aa22.35■■□□□ 1.17
EGFR-208ENST00000459688 LTN1O94822 1766 aa22.35■■□□□ 1.17
EGFR-208ENST00000459688 LARP1Q6PKG0 1096 aaKnown RBP22.34■■□□□ 1.17
EGFR-208ENST00000459688 SPATA31A5Q5VU36 1347 aa22.33■■□□□ 1.17
EGFR-208ENST00000459688 SPATA31A7Q8IWB4 1347 aa22.33■■□□□ 1.17
EGFR-208ENST00000459688 USP35Q9P2H5 1018 aa22.33■■□□□ 1.17
EGFR-208ENST00000459688 A0A0G2JS52 829 aa22.32■■□□□ 1.16
EGFR-208ENST00000459688 MYT1Q01538 1121 aa22.32■■□□□ 1.16
EGFR-208ENST00000459688 FAM98CQ17RN3 349 aaKnown RBP22.31■■□□□ 1.16
EGFR-208ENST00000459688 SPATA31A1Q5TZJ5 1347 aa22.31■■□□□ 1.16
EGFR-208ENST00000459688 RRS1Q15050 365 aaKnown RBP22.3■■□□□ 1.16
EGFR-208ENST00000459688 KNSTRNQ9Y448 316 aa22.3■■□□□ 1.16
EGFR-208ENST00000459688 ABCC6O95255 1503 aa22.3■■□□□ 1.16
EGFR-208ENST00000459688 RGPD5Q99666 1765 aa22.3■■□□□ 1.16
EGFR-208ENST00000459688 MAP3K19Q56UN5 1328 aa22.3■■□□□ 1.16
EGFR-208ENST00000459688 SOCS7O14512 581 aa22.29■■□□□ 1.16
EGFR-208ENST00000459688 CSB-PGBD3P0DP91 1061 aa22.29■■□□□ 1.16
EGFR-208ENST00000459688 TOM1L2Q6ZVM7 507 aa22.28■■□□□ 1.16
EGFR-208ENST00000459688 AMPHP49418 695 aa22.27■■□□□ 1.16
EGFR-208ENST00000459688 CRB1P82279 1406 aa22.27■■□□□ 1.16
EGFR-208ENST00000459688 SEPT12Q8IYM1 358 aa22.27■■□□□ 1.16
EGFR-208ENST00000459688 WDR17Q8IZU2 1322 aa22.27■■□□□ 1.16
EGFR-208ENST00000459688 TNNT2P45379 298 aaPredicted RBP22.26■■□□□ 1.15
EGFR-208ENST00000459688 ANKRD26Q9UPS8 1709 aa22.26■■□□□ 1.15
EGFR-208ENST00000459688 IP6K1Q92551 441 aa22.25■■□□□ 1.15
EGFR-208ENST00000459688 NSD2O96028 1365 aa22.25■■□□□ 1.15
EGFR-208ENST00000459688 HOXC9P31274 260 aa22.24■■□□□ 1.15
EGFR-208ENST00000459688 TCP11L2Q8N4U5 519 aa22.24■■□□□ 1.15
EGFR-208ENST00000459688 ANKRD24Q8TF21 1146 aa22.24■■□□□ 1.15
EGFR-208ENST00000459688 LTV1Q96GA3 475 aaPredicted RBP22.24■■□□□ 1.15
EGFR-208ENST00000459688 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
EGFR-208ENST00000459688 ONECUT3O60422 494 aaPredicted RBP22.23■■□□□ 1.15
EGFR-208ENST00000459688 ERBB3P21860 1342 aa22.23■■□□□ 1.15
EGFR-208ENST00000459688 CNGB1Q14028 1251 aaPredicted RBP22.22■■□□□ 1.15
EGFR-208ENST00000459688 EMILIN1Q9Y6C2 1016 aa22.22■■□□□ 1.15
EGFR-208ENST00000459688 RTL1A6NKG5 1358 aa22.22■■□□□ 1.15
EGFR-208ENST00000459688 THSD7AQ9UPZ6 1657 aa22.21■■□□□ 1.15
EGFR-208ENST00000459688 PEAK1Q9H792 1746 aa22.21■■□□□ 1.15
EGFR-208ENST00000459688 PPM1GO15355 546 aaPredicted RBP22.21■■□□□ 1.15
EGFR-208ENST00000459688 AMER1Q5JTC6 1135 aaPredicted RBP22.21■■□□□ 1.15
EGFR-208ENST00000459688 MORC1Q86VD1 984 aa22.21■■□□□ 1.15
EGFR-208ENST00000459688 PER1O15534 1290 aaPredicted RBP22.2■■□□□ 1.14
EGFR-208ENST00000459688 BARGINQ6ZT62 677 aa22.2■■□□□ 1.14
EGFR-208ENST00000459688 NLRP2Q9NX02 1062 aa22.2■■□□□ 1.14
EGFR-208ENST00000459688 BRWD3Q6RI45 1802 aa22.2■■□□□ 1.14
EGFR-208ENST00000459688 CC2D1BQ5T0F9 858 aaKnown RBP22.19■■□□□ 1.14
EGFR-208ENST00000459688 THRAP3Q9Y2W1 955 aaKnown RBP22.19■■□□□ 1.14
EGFR-208ENST00000459688 FLT4P35916 1363 aa22.18■■□□□ 1.14
EGFR-208ENST00000459688 CARD10Q9BWT7 1032 aa22.18■■□□□ 1.14
EGFR-208ENST00000459688 HSP90AB2PQ58FF8 381 aa22.17■■□□□ 1.14
EGFR-208ENST00000459688 KRT27Q7Z3Y8 459 aa22.17■■□□□ 1.14
EGFR-208ENST00000459688 POLKQ9UBT6 870 aa22.15■■□□□ 1.14
EGFR-208ENST00000459688 SMG6Q86US8 1419 aaKnown RBP22.14■■□□□ 1.14
EGFR-208ENST00000459688 INSRP06213 1382 aa22.14■■□□□ 1.14
EGFR-208ENST00000459688 KIF24Q5T7B8 1368 aa22.14■■□□□ 1.14
EGFR-208ENST00000459688 EP400Q96L91 3159 aa22.14■■□□□ 1.14
EGFR-208ENST00000459688 WNK3Q9BYP7 1800 aa22.13■■□□□ 1.13
EGFR-208ENST00000459688 FAM182BQ5T319 152 aa22.13■■□□□ 1.13
EGFR-208ENST00000459688 FAM208AQ9UK61 1670 aaKnown RBP22.13■■□□□ 1.13
EGFR-208ENST00000459688 MAP2P11137 1827 aaKnown RBP22.13■■□□□ 1.13
EGFR-208ENST00000459688 UPF1Q92900 1129 aaKnown RBP eCLIP22.11■■□□□ 1.13
EGFR-208ENST00000459688 PARP4Q9UKK3 1724 aaKnown RBP22.11■■□□□ 1.13
EGFR-208ENST00000459688 LRRC37A3O60309 1634 aa22.1■■□□□ 1.13
EGFR-208ENST00000459688 DISP2A7MBM2 1401 aa22.1■■□□□ 1.13
EGFR-208ENST00000459688 PDE3BQ13370 1112 aa22.1■■□□□ 1.13
EGFR-208ENST00000459688 RGPD2P0DJD1 1756 aa22.1■■□□□ 1.13
EGFR-208ENST00000459688 USHBP1Q8N6Y0 703 aa22.09■■□□□ 1.13
EGFR-208ENST00000459688 NPC1L1Q9UHC9 1359 aa22.09■■□□□ 1.13
EGFR-208ENST00000459688 DDB1Q16531 1140 aa22.08■■□□□ 1.13
EGFR-208ENST00000459688 NBPF6Q5VWK0 638 aa22.08■■□□□ 1.13
EGFR-208ENST00000459688 NBPF4Q96M43 638 aa22.08■■□□□ 1.13
EGFR-208ENST00000459688 CDCA7Q9BWT1 371 aaPredicted RBP22.08■■□□□ 1.13
EGFR-208ENST00000459688 IL2RBP14784 551 aa22.07■■□□□ 1.12
EGFR-208ENST00000459688 DDX10Q13206 875 aaKnown RBP22.07■■□□□ 1.12
EGFR-208ENST00000459688 EXOC5O00471 708 aa22.03■■□□□ 1.12
EGFR-208ENST00000459688 EIF4A2Q14240 407 aaKnown RBP22.03■■□□□ 1.12
EGFR-208ENST00000459688 TNS2Q63HR2 1409 aa22.03■■□□□ 1.12
EGFR-208ENST00000459688 MTHFSP49914 203 aa22.02■■□□□ 1.12
EGFR-208ENST00000459688 MEGF6O75095 1541 aa22.01■■□□□ 1.11
EGFR-208ENST00000459688 FAM196AQ6ZSG2 479 aa22■■□□□ 1.11
EGFR-208ENST00000459688 MARCH10Q8NA82 808 aaPredicted RBP22■■□□□ 1.11
EGFR-208ENST00000459688 EYA1Q99502 592 aa22■■□□□ 1.11
EGFR-208ENST00000459688 RAPGEF4Q8WZA2 1011 aa21.99■■□□□ 1.11
EGFR-208ENST00000459688 OVOS2A0A0G2JMS6 1433 aa21.98■■□□□ 1.11
EGFR-208ENST00000459688 TRIM37O94972 964 aa21.96■■□□□ 1.11
EGFR-208ENST00000459688 TATP17735 454 aaPredicted RBP21.96■■□□□ 1.11
EGFR-208ENST00000459688 SF3B2Q13435 895 aaKnown RBP21.96■■□□□ 1.11
EGFR-208ENST00000459688 ZNF316A6NFI3 1004 aaPredicted RBP21.95■■□□□ 1.1
EGFR-208ENST00000459688 CCDC125Q86Z20 511 aa21.95■■□□□ 1.1
EGFR-208ENST00000459688 DDX54Q8TDD1 881 aaKnown RBP21.95■■□□□ 1.1
EGFR-208ENST00000459688 NCAPD2Q15021 1401 aa21.95■■□□□ 1.1
EGFR-208ENST00000459688 PPP2R1AP30153 589 aa21.93■■□□□ 1.1
EGFR-208ENST00000459688 IL13P35225 146 aa21.93■■□□□ 1.1
EGFR-208ENST00000459688 IGSF1Q8N6C5 1336 aa21.93■■□□□ 1.1
EGFR-208ENST00000459688 ZCRB1Q8TBF4 217 aaKnown RBP21.93■■□□□ 1.1
EGFR-208ENST00000459688 RGPD1P0DJD0 1748 aa21.92■■□□□ 1.1
EGFR-208ENST00000459688 DEFB132Q7Z7B7 95 aa21.91■■□□□ 1.1
EGFR-208ENST00000459688 PARD3Q8TEW0 1356 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms