RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 THRAP3Q9Y2W1 955 aaKnown RBP18.54■□□□□ 0.56
COMMD1-206ENST00000458337 ZBTB7CA1YPR0 619 aa18.53■□□□□ 0.56
COMMD1-206ENST00000458337 SOX12O15370 315 aa18.53■□□□□ 0.56
COMMD1-206ENST00000458337 CCDC125Q86Z20 511 aa18.53■□□□□ 0.56
COMMD1-206ENST00000458337 TCP11L2Q8N4U5 519 aa18.53■□□□□ 0.56
COMMD1-206ENST00000458337 COG3Q96JB2 828 aa18.52■□□□□ 0.56
COMMD1-206ENST00000458337 CRB1P82279 1406 aa18.51■□□□□ 0.55
COMMD1-206ENST00000458337 ABCC6O95255 1503 aa18.51■□□□□ 0.55
COMMD1-206ENST00000458337 C11orf95C9JLR9 678 aaPredicted RBP18.51■□□□□ 0.55
COMMD1-206ENST00000458337 MYOM1P52179 1685 aa18.5■□□□□ 0.55
COMMD1-206ENST00000458337 THSD7AQ9UPZ6 1657 aa18.5■□□□□ 0.55
COMMD1-206ENST00000458337 WDR17Q8IZU2 1322 aa18.5■□□□□ 0.55
COMMD1-206ENST00000458337 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
COMMD1-206ENST00000458337 RGPD5Q99666 1765 aa18.49■□□□□ 0.55
COMMD1-206ENST00000458337 A0A0G2JS52 829 aa18.48■□□□□ 0.55
COMMD1-206ENST00000458337 MYT1Q01538 1121 aa18.48■□□□□ 0.55
COMMD1-206ENST00000458337 CARD10Q9BWT7 1032 aa18.48■□□□□ 0.55
COMMD1-206ENST00000458337 TOM1L2Q6ZVM7 507 aa18.47■□□□□ 0.55
COMMD1-206ENST00000458337 IP6K1Q92551 441 aa18.47■□□□□ 0.55
COMMD1-206ENST00000458337 GGNBP2Q9H3C7 697 aa18.47■□□□□ 0.55
COMMD1-206ENST00000458337 FBLN1P23142 703 aa18.45■□□□□ 0.54
COMMD1-206ENST00000458337 LTN1O94822 1766 aa18.45■□□□□ 0.54
COMMD1-206ENST00000458337 NSD3Q9BZ95 1437 aa18.44■□□□□ 0.54
COMMD1-206ENST00000458337 ERBB3P21860 1342 aa18.44■□□□□ 0.54
COMMD1-206ENST00000458337 MAP3K19Q56UN5 1328 aa18.44■□□□□ 0.54
COMMD1-206ENST00000458337 BLMP54132 1417 aaPredicted RBP18.43■□□□□ 0.54
COMMD1-206ENST00000458337 POLR3GLQ9BT43 218 aa18.43■□□□□ 0.54
COMMD1-206ENST00000458337 CDCA7Q9BWT1 371 aaPredicted RBP18.43■□□□□ 0.54
COMMD1-206ENST00000458337 CSB-PGBD3P0DP91 1061 aa18.42■□□□□ 0.54
COMMD1-206ENST00000458337 ANKRD24Q8TF21 1146 aa18.42■□□□□ 0.54
COMMD1-206ENST00000458337 PANK3Q9H999 370 aa18.42■□□□□ 0.54
COMMD1-206ENST00000458337 PDE3BQ13370 1112 aa18.41■□□□□ 0.54
COMMD1-206ENST00000458337 FAM182BQ5T319 152 aa18.41■□□□□ 0.54
COMMD1-206ENST00000458337 FAM196AQ6ZSG2 479 aa18.41■□□□□ 0.54
COMMD1-206ENST00000458337 CGNL1Q0VF96 1302 aa18.41■□□□□ 0.54
COMMD1-206ENST00000458337 CCDC7Q96M83 1385 aa18.41■□□□□ 0.54
COMMD1-206ENST00000458337 HOXC9P31274 260 aa18.4■□□□□ 0.54
COMMD1-206ENST00000458337 PARP4Q9UKK3 1724 aaKnown RBP18.4■□□□□ 0.54
COMMD1-206ENST00000458337 KIF20BQ96Q89 1820 aa18.39■□□□□ 0.54
COMMD1-206ENST00000458337 AMPHP49418 695 aa18.39■□□□□ 0.53
COMMD1-206ENST00000458337 KIF7Q2M1P5 1343 aa18.39■□□□□ 0.53
COMMD1-206ENST00000458337 RRS1Q15050 365 aaKnown RBP18.38■□□□□ 0.53
COMMD1-206ENST00000458337 NLRP2Q9NX02 1062 aa18.38■□□□□ 0.53
COMMD1-206ENST00000458337 DISP2A7MBM2 1401 aa18.38■□□□□ 0.53
COMMD1-206ENST00000458337 DDB1Q16531 1140 aa18.37■□□□□ 0.53
COMMD1-206ENST00000458337 RTL1A6NKG5 1358 aa18.37■□□□□ 0.53
COMMD1-206ENST00000458337 KIF24Q5T7B8 1368 aa18.37■□□□□ 0.53
COMMD1-206ENST00000458337 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
COMMD1-206ENST00000458337 EXOC5O00471 708 aa18.35■□□□□ 0.53
COMMD1-206ENST00000458337 DEFB132Q7Z7B7 95 aa18.34■□□□□ 0.53
COMMD1-206ENST00000458337 MARCH10Q8NA82 808 aaPredicted RBP18.34■□□□□ 0.53
COMMD1-206ENST00000458337 INSRP06213 1382 aa18.33■□□□□ 0.53
COMMD1-206ENST00000458337 WNK3Q9BYP7 1800 aa18.33■□□□□ 0.53
COMMD1-206ENST00000458337 IL2RBP14784 551 aa18.33■□□□□ 0.52
COMMD1-206ENST00000458337 HSP90AB2PQ58FF8 381 aa18.33■□□□□ 0.52
COMMD1-206ENST00000458337 LTV1Q96GA3 475 aaPredicted RBP18.33■□□□□ 0.52
COMMD1-206ENST00000458337 PER1O15534 1290 aaPredicted RBP18.32■□□□□ 0.52
COMMD1-206ENST00000458337 BCL9O00512 1426 aa18.32■□□□□ 0.52
COMMD1-206ENST00000458337 NSD2O96028 1365 aa18.31■□□□□ 0.52
COMMD1-206ENST00000458337 FLT4P35916 1363 aa18.31■□□□□ 0.52
COMMD1-206ENST00000458337 LRRC37A3O60309 1634 aa18.31■□□□□ 0.52
COMMD1-206ENST00000458337 TRIM37O94972 964 aa18.31■□□□□ 0.52
COMMD1-206ENST00000458337 POLKQ9UBT6 870 aa18.31■□□□□ 0.52
COMMD1-206ENST00000458337 KNSTRNQ9Y448 316 aa18.31■□□□□ 0.52
COMMD1-206ENST00000458337 EMILIN1Q9Y6C2 1016 aa18.31■□□□□ 0.52
COMMD1-206ENST00000458337 PEAK1Q9H792 1746 aa18.31■□□□□ 0.52
COMMD1-206ENST00000458337 MAP2P11137 1827 aaKnown RBP18.3■□□□□ 0.52
COMMD1-206ENST00000458337 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
COMMD1-206ENST00000458337 RGPD1P0DJD0 1748 aa18.3■□□□□ 0.52
COMMD1-206ENST00000458337 BAG6P46379 1132 aa18.3■□□□□ 0.52
COMMD1-206ENST00000458337 NBPF6Q5VWK0 638 aa18.3■□□□□ 0.52
COMMD1-206ENST00000458337 NBPF4Q96M43 638 aa18.3■□□□□ 0.52
COMMD1-206ENST00000458337 FAM208AQ9UK61 1670 aaKnown RBP18.3■□□□□ 0.52
COMMD1-206ENST00000458337 OVOS2A0A0G2JMS6 1433 aa18.3■□□□□ 0.52
COMMD1-206ENST00000458337 AMER1Q5JTC6 1135 aaPredicted RBP18.29■□□□□ 0.52
COMMD1-206ENST00000458337 ANKRD26Q9UPS8 1709 aa18.29■□□□□ 0.52
COMMD1-206ENST00000458337 CAMKK2Q96RR4 588 aa18.27■□□□□ 0.52
COMMD1-206ENST00000458337 TNS1Q9HBL0 1735 aaKnown RBP18.26■□□□□ 0.51
COMMD1-206ENST00000458337 TNS2Q63HR2 1409 aa18.26■□□□□ 0.51
COMMD1-206ENST00000458337 APBA3O96018 575 aa18.26■□□□□ 0.51
COMMD1-206ENST00000458337 EN1Q05925 392 aaPredicted RBP18.26■□□□□ 0.51
COMMD1-206ENST00000458337 RGPD2P0DJD1 1756 aa18.26■□□□□ 0.51
COMMD1-206ENST00000458337 SBF2Q86WG5 1849 aa18.26■□□□□ 0.51
COMMD1-206ENST00000458337 MORC1Q86VD1 984 aa18.25■□□□□ 0.51
COMMD1-206ENST00000458337 BCL11BQ9C0K0 894 aaPredicted RBP18.25■□□□□ 0.51
COMMD1-206ENST00000458337 SMG6Q86US8 1419 aaKnown RBP18.24■□□□□ 0.51
COMMD1-206ENST00000458337 PPM1GO15355 546 aaPredicted RBP18.24■□□□□ 0.51
COMMD1-206ENST00000458337 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
COMMD1-206ENST00000458337 PARD3Q8TEW0 1356 aa18.22■□□□□ 0.51
COMMD1-206ENST00000458337 PLSCR1O15162 318 aa18.22■□□□□ 0.51
COMMD1-206ENST00000458337 EZH2Q15910 746 aaKnown RBP18.22■□□□□ 0.51
COMMD1-206ENST00000458337 PTF1AQ7RTS3 328 aa18.22■□□□□ 0.51
COMMD1-206ENST00000458337 USHBP1Q8N6Y0 703 aa18.21■□□□□ 0.51
COMMD1-206ENST00000458337 ZCRB1Q8TBF4 217 aaKnown RBP18.21■□□□□ 0.51
COMMD1-206ENST00000458337 NCAPD2Q15021 1401 aa18.21■□□□□ 0.51
COMMD1-206ENST00000458337 NPC1L1Q9UHC9 1359 aa18.2■□□□□ 0.5
COMMD1-206ENST00000458337 EYA1Q99502 592 aa18.2■□□□□ 0.5
COMMD1-206ENST00000458337 MEGF6O75095 1541 aa18.19■□□□□ 0.5
COMMD1-206ENST00000458337 EIF4A2Q14240 407 aaKnown RBP18.19■□□□□ 0.5
COMMD1-206ENST00000458337 DDX54Q8TDD1 881 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms