RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 STRN4Q9NRL3 753 aa11.74□□□□□ -0.53
CLTCL1-204ENST00000458188 BTG4Q9NY30 223 aa11.74□□□□□ -0.53
CLTCL1-204ENST00000458188 HOXC9P31274 260 aa11.73□□□□□ -0.53
CLTCL1-204ENST00000458188 CCDC184Q52MB2 194 aa11.73□□□□□ -0.53
CLTCL1-204ENST00000458188 MIER1Q8N108 512 aa11.73□□□□□ -0.53
CLTCL1-204ENST00000458188 PARD3Q8TEW0 1356 aa11.73□□□□□ -0.53
CLTCL1-204ENST00000458188 SLIT3O75094 1523 aa11.72□□□□□ -0.53
CLTCL1-204ENST00000458188 EVA1CP58658 441 aa11.72□□□□□ -0.53
CLTCL1-204ENST00000458188 SF3B2Q13435 895 aaKnown RBP11.72□□□□□ -0.53
CLTCL1-204ENST00000458188 IP6K1Q92551 441 aa11.72□□□□□ -0.53
CLTCL1-204ENST00000458188 AATKQ6ZMQ8 1374 aa11.71□□□□□ -0.53
CLTCL1-204ENST00000458188 CSB-PGBD3P0DP91 1061 aa11.71□□□□□ -0.53
CLTCL1-204ENST00000458188 NFAT5O94916 1531 aa11.7□□□□□ -0.54
CLTCL1-204ENST00000458188 CPDO75976 1380 aa11.7□□□□□ -0.54
CLTCL1-204ENST00000458188 MYBBP1AQ9BQG0 1328 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-204ENST00000458188 LARP1Q6PKG0 1096 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-204ENST00000458188 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
CLTCL1-204ENST00000458188 ANKRD24Q8TF21 1146 aa11.7□□□□□ -0.54
CLTCL1-204ENST00000458188 USP35Q9P2H5 1018 aa11.7□□□□□ -0.54
CLTCL1-204ENST00000458188 MARF1Q9Y4F3 1742 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-204ENST00000458188 COL22A1Q8NFW1 1626 aaPredicted RBP11.69□□□□□ -0.54
CLTCL1-204ENST00000458188 EIF4A2Q14240 407 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-204ENST00000458188 USHBP1Q8N6Y0 703 aa11.69□□□□□ -0.54
CLTCL1-204ENST00000458188 CCDC9Q9Y3X0 531 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-204ENST00000458188 KIF20BQ96Q89 1820 aa11.69□□□□□ -0.54
CLTCL1-204ENST00000458188 NLRP2Q9NX02 1062 aa11.68□□□□□ -0.54
CLTCL1-204ENST00000458188 PHRF1Q9P1Y6 1649 aaKnown RBP11.68□□□□□ -0.54
CLTCL1-204ENST00000458188 FLT4P35916 1363 aa11.67□□□□□ -0.54
CLTCL1-204ENST00000458188 U2SURPO15042 1029 aaKnown RBP11.67□□□□□ -0.54
CLTCL1-204ENST00000458188 DIAPH1O60610 1272 aaKnown RBP11.67□□□□□ -0.54
CLTCL1-204ENST00000458188 TOM1L2Q6ZVM7 507 aa11.67□□□□□ -0.54
CLTCL1-204ENST00000458188 UNC5CLQ8IV45 518 aa11.67□□□□□ -0.54
CLTCL1-204ENST00000458188 CFAP53Q96M91 514 aa11.67□□□□□ -0.54
CLTCL1-204ENST00000458188 BLMP54132 1417 aaPredicted RBP11.67□□□□□ -0.54
CLTCL1-204ENST00000458188 CAMTA1Q9Y6Y1 1673 aa11.66□□□□□ -0.54
CLTCL1-204ENST00000458188 IL13P35225 146 aa11.66□□□□□ -0.54
CLTCL1-204ENST00000458188 NBPF6Q5VWK0 638 aa11.66□□□□□ -0.54
CLTCL1-204ENST00000458188 GJD4Q96KN9 370 aaPredicted RBP11.66□□□□□ -0.54
CLTCL1-204ENST00000458188 NBPF4Q96M43 638 aa11.66□□□□□ -0.54
CLTCL1-204ENST00000458188 MRS2Q9HD23 443 aa11.66□□□□□ -0.54
CLTCL1-204ENST00000458188 LRP5O75197 1615 aa11.66□□□□□ -0.54
CLTCL1-204ENST00000458188 ATRNO75882 1429 aa11.66□□□□□ -0.54
CLTCL1-204ENST00000458188 CRYBG1Q9Y4K1 1723 aa11.66□□□□□ -0.54
CLTCL1-204ENST00000458188 DEFB132Q7Z7B7 95 aa11.65□□□□□ -0.54
CLTCL1-204ENST00000458188 EYA1Q99502 592 aa11.65□□□□□ -0.54
CLTCL1-204ENST00000458188 EP400Q96L91 3159 aa11.65□□□□□ -0.54
CLTCL1-204ENST00000458188 INSRP06213 1382 aa11.65□□□□□ -0.55
CLTCL1-204ENST00000458188 BCL9LQ86UU0 1499 aa11.64□□□□□ -0.55
CLTCL1-204ENST00000458188 ERBB3P21860 1342 aa11.64□□□□□ -0.55
CLTCL1-204ENST00000458188 ABCA3Q99758 1704 aa11.64□□□□□ -0.55
CLTCL1-204ENST00000458188 PEAK1Q9H792 1746 aa11.64□□□□□ -0.55
CLTCL1-204ENST00000458188 SENP3-EIF4A1A0A087X0R7 540 aa11.64□□□□□ -0.55
CLTCL1-204ENST00000458188 HMOX1P09601 288 aa11.64□□□□□ -0.55
CLTCL1-204ENST00000458188 AEBP1Q8IUX7 1158 aa11.64□□□□□ -0.55
CLTCL1-204ENST00000458188 SLIT2O94813 1529 aa11.64□□□□□ -0.55
CLTCL1-204ENST00000458188 RTL1A6NKG5 1358 aa11.64□□□□□ -0.55
CLTCL1-204ENST00000458188 USP54Q70EL1 1684 aa11.63□□□□□ -0.55
CLTCL1-204ENST00000458188 U2AF1L5P0DN76 240 aaPredicted RBP11.63□□□□□ -0.55
CLTCL1-204ENST00000458188 U2AF1Q01081 240 aaKnown RBP eCLIP11.63□□□□□ -0.55
CLTCL1-204ENST00000458188 COL5A2P05997 1499 aaPredicted RBP11.63□□□□□ -0.55
CLTCL1-204ENST00000458188 WDR17Q8IZU2 1322 aa11.62□□□□□ -0.55
CLTCL1-204ENST00000458188 SMG6Q86US8 1419 aaKnown RBP11.62□□□□□ -0.55
CLTCL1-204ENST00000458188 VPS72Q15906 364 aa11.62□□□□□ -0.55
CLTCL1-204ENST00000458188 SULT6B1Q6IMI4 303 aa11.62□□□□□ -0.55
CLTCL1-204ENST00000458188 ANKRD26Q9UPS8 1709 aa11.62□□□□□ -0.55
CLTCL1-204ENST00000458188 PSDA5PKW4 1024 aaPredicted RBP11.61□□□□□ -0.55
CLTCL1-204ENST00000458188 YY1P25490 414 aa11.61□□□□□ -0.55
CLTCL1-204ENST00000458188 FAM98CQ17RN3 349 aaKnown RBP11.61□□□□□ -0.55
CLTCL1-204ENST00000458188 FAM9BQ8IZU0 186 aa11.61□□□□□ -0.55
CLTCL1-204ENST00000458188 NUDCQ9Y266 331 aa11.61□□□□□ -0.55
CLTCL1-204ENST00000458188 KIF24Q5T7B8 1368 aa11.61□□□□□ -0.55
CLTCL1-204ENST00000458188 SPATA31A1Q5TZJ5 1347 aa11.6□□□□□ -0.55
CLTCL1-204ENST00000458188 SPATA31A5Q5VU36 1347 aa11.6□□□□□ -0.55
CLTCL1-204ENST00000458188 SPATA31A7Q8IWB4 1347 aa11.6□□□□□ -0.55
CLTCL1-204ENST00000458188 COL18A1P39060 1754 aa11.6□□□□□ -0.55
CLTCL1-204ENST00000458188 COL14A1Q05707 1796 aaKnown RBP11.6□□□□□ -0.55
CLTCL1-204ENST00000458188 A0A0G2JS52 829 aa11.6□□□□□ -0.55
CLTCL1-204ENST00000458188 MYT1Q01538 1121 aa11.6□□□□□ -0.55
CLTCL1-204ENST00000458188 CARD10Q9BWT7 1032 aa11.6□□□□□ -0.55
CLTCL1-204ENST00000458188 ADAMTS8Q9UP79 889 aa11.6□□□□□ -0.55
CLTCL1-204ENST00000458188 COL3A1P02461 1466 aaPredicted RBP11.59□□□□□ -0.55
CLTCL1-204ENST00000458188 WDR43Q15061 677 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLTCL1-204ENST00000458188 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
CLTCL1-204ENST00000458188 TCP11L2Q8N4U5 519 aa11.59□□□□□ -0.55
CLTCL1-204ENST00000458188 PNISRQ8TF01 805 aaKnown RBP11.59□□□□□ -0.55
CLTCL1-204ENST00000458188 CRB1P82279 1406 aa11.59□□□□□ -0.55
CLTCL1-204ENST00000458188 LTN1O94822 1766 aa11.59□□□□□ -0.55
CLTCL1-204ENST00000458188 LMO7Q8WWI1 1683 aa11.59□□□□□ -0.55
CLTCL1-204ENST00000458188 MAP2P11137 1827 aaKnown RBP11.58□□□□□ -0.56
CLTCL1-204ENST00000458188 CCER2I3L3R5 266 aa11.58□□□□□ -0.56
CLTCL1-204ENST00000458188 BAG6P46379 1132 aa11.58□□□□□ -0.56
CLTCL1-204ENST00000458188 IGSF1Q8N6C5 1336 aa11.58□□□□□ -0.56
CLTCL1-204ENST00000458188 DCAF8L1A6NGE4 600 aa11.57□□□□□ -0.56
CLTCL1-204ENST00000458188 PRKAR2BP31323 418 aa11.57□□□□□ -0.56
CLTCL1-204ENST00000458188 IL2RBP14784 551 aa11.56□□□□□ -0.56
CLTCL1-204ENST00000458188 SEPT12Q8IYM1 358 aa11.56□□□□□ -0.56
CLTCL1-204ENST00000458188 RAPGEF4Q8WZA2 1011 aa11.56□□□□□ -0.56
CLTCL1-204ENST00000458188 PHACTR3Q96KR7 559 aa11.56□□□□□ -0.56
CLTCL1-204ENST00000458188 RSPH6AQ9H0K4 717 aa11.56□□□□□ -0.56
CLTCL1-204ENST00000458188 PLCH1Q4KWH8 1693 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms