RNA–Protein interactions for RNA: ENST00000457647.2

RGPD4-AS1-202, Transcript of RGPD4 antisense RNA 1 (head to head), humanhuman

TSL 1 (best) BASIC

Gene RGPD4-AS1, Length 1,792 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-AS1-202ENST00000457647 PLCH1Q4KWH8 1693 aa17.06■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 HOXC9P31274 260 aa17.06■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 AMPHP49418 695 aa17.06■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 HSP90AB2PQ58FF8 381 aa17.06■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 COL14A1Q05707 1796 aaKnown RBP17.06■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 CDK12Q9NYV4 1490 aaPredicted RBP17.06■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 CAMTA1Q9Y6Y1 1673 aa17.05■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 FLT4P35916 1363 aa17.05■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 RGPD2P0DJD1 1756 aa17.05■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 IP6K1Q92551 441 aa17.05■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 COL3A1P02461 1466 aaPredicted RBP17.04■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 RTL1A6NKG5 1358 aa17.03■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 C8orf37Q96NL8 207 aa17.03■□□□□ 0.32
RGPD4-AS1-202ENST00000457647 LTV1Q96GA3 475 aaPredicted RBP17.02■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 NRAPQ86VF7 1730 aa17.02■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 ABCC6O95255 1503 aa17.01■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 INSRP06213 1382 aa17.01■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 BTG4Q9NY30 223 aa17.01■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 MEX3CQ5U5Q3 659 aaKnown RBP17■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 COL5A2P05997 1499 aaPredicted RBP17■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 NWD2Q9ULI1 1742 aa17■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 SLIT2O94813 1529 aa17■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 EIF4A2Q14240 407 aaKnown RBP17■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 BLMP54132 1417 aaPredicted RBP16.99■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 ANKRD24Q8TF21 1146 aa16.99■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 NGLY1Q96IV0 654 aa16.99■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 ERBB3P21860 1342 aa16.98■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 IL13P35225 146 aa16.97■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 STRN4Q9NRL3 753 aa16.97■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 BCL9LQ86UU0 1499 aa16.97■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 RGPD1P0DJD0 1748 aa16.97■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 DIAPH1O60610 1272 aaKnown RBP16.96■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 FNBP4Q8N3X1 1017 aaPredicted RBP16.96■□□□□ 0.31
RGPD4-AS1-202ENST00000457647 AFF2P51816 1311 aa16.96■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 LARP1Q6PKG0 1096 aaKnown RBP16.95■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 CCER2I3L3R5 266 aa16.94■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 FAM208AQ9UK61 1670 aaKnown RBP16.94■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 USHBP1Q8N6Y0 703 aa16.94■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 EYA1Q99502 592 aa16.94■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.94■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 WDR17Q8IZU2 1322 aa16.93■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 CSB-PGBD3P0DP91 1061 aa16.93■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 EVA1CP58658 441 aa16.93■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 U2SURPO15042 1029 aaKnown RBP16.92■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 UNC5CLQ8IV45 518 aa16.92■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 USP21Q9UK80 565 aa16.92■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 AEBP1Q8IUX7 1158 aa16.92■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 NLRP2Q9NX02 1062 aa16.92■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 PNISRQ8TF01 805 aaKnown RBP16.91■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 TOM1L2Q6ZVM7 507 aa16.9■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 IGSF1Q8N6C5 1336 aa16.9■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 HMOX1P09601 288 aa16.89■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 USP35Q9P2H5 1018 aa16.89■□□□□ 0.3
RGPD4-AS1-202ENST00000457647 CRB1P82279 1406 aa16.89■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 NCAPD2Q15021 1401 aa16.88■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 SULT6B1Q6IMI4 303 aa16.88■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 ADAMTS8Q9UP79 889 aa16.88■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 NUDCQ9Y266 331 aa16.88■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 FAM9BQ8IZU0 186 aa16.87■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 CARD10Q9BWT7 1032 aa16.87■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 ATRNO75882 1429 aa16.87■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 WDR43Q15061 677 aaKnown RBP eCLIP16.87■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 VPS72Q15906 364 aa16.87■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 RGS17Q9UGC6 210 aaPredicted RBP16.87■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 CCDC9Q9Y3X0 531 aaKnown RBP16.87■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 SPATA31A5Q5VU36 1347 aa16.87■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 SPATA31A7Q8IWB4 1347 aa16.87■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 SPATA31A1Q5TZJ5 1347 aa16.86■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 KDRP35968 1356 aa16.86■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 GLI3P10071 1580 aa16.86■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 RSPH6AQ9H0K4 717 aa16.85■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 MEGF6O75095 1541 aa16.85■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 CCDC146Q8IYE0 955 aa16.84■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 QTRT2Q9H974 415 aaKnown RBP16.84■□□□□ 0.29
RGPD4-AS1-202ENST00000457647 TRPC5Q9UL62 973 aaPredicted RBP16.83■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 SENP3-EIF4A1A0A087X0R7 540 aa16.82■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 PRKAR2BP31323 418 aa16.82■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 TCP11L2Q8N4U5 519 aa16.82■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 DISP2A7MBM2 1401 aa16.81■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 FCHSD2O94868 740 aa16.81■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 ZNF772Q68DY9 489 aaPredicted RBP16.81■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 GJD4Q96KN9 370 aaPredicted RBP16.81■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 PHACTR3Q96KR7 559 aa16.81■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 PLEKHF1Q96S99 279 aa16.81■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 PARP4Q9UKK3 1724 aaKnown RBP16.8■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 FAM98CQ17RN3 349 aaKnown RBP16.8■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 POTEAQ6S8J7 498 aa16.8■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 SHANK3Q9BYB0 1731 aa16.8■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 DLG5Q8TDM6 1919 aa16.78■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 PKD1L3Q7Z443 1732 aa16.78■□□□□ 0.28
RGPD4-AS1-202ENST00000457647 OVOS2A0A0G2JMS6 1433 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms