RNA–Protein interactions for RNA: ENST00000455894.1

LINC00378-202, long intergenic non-protein coding RNA 378, humanhuman

TSL 5

Gene LINC00378, Length 324 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00378-202ENST00000455894 AXIN2Q9Y2T1 843 aa17.75■□□□□ 0.43
LINC00378-202ENST00000455894 CCDC9Q9Y3X0 531 aaKnown RBP17.75■□□□□ 0.43
LINC00378-202ENST00000455894 MAP3K19Q56UN5 1328 aa17.74■□□□□ 0.43
LINC00378-202ENST00000455894 LTN1O94822 1766 aa17.74■□□□□ 0.43
LINC00378-202ENST00000455894 ABCC6O95255 1503 aa17.74■□□□□ 0.43
LINC00378-202ENST00000455894 MORC1Q86VD1 984 aa17.74■□□□□ 0.43
LINC00378-202ENST00000455894 ANKRD26Q9UPS8 1709 aa17.74■□□□□ 0.43
LINC00378-202ENST00000455894 AMPHP49418 695 aa17.73■□□□□ 0.43
LINC00378-202ENST00000455894 RRS1Q15050 365 aaKnown RBP17.73■□□□□ 0.43
LINC00378-202ENST00000455894 ILDR2Q71H61 639 aa17.73■□□□□ 0.43
LINC00378-202ENST00000455894 IP6K1Q92551 441 aa17.73■□□□□ 0.43
LINC00378-202ENST00000455894 COL5A2P05997 1499 aaPredicted RBP17.73■□□□□ 0.43
LINC00378-202ENST00000455894 LARP1Q6PKG0 1096 aaKnown RBP17.72■□□□□ 0.43
LINC00378-202ENST00000455894 SPATA31A5Q5VU36 1347 aa17.72■□□□□ 0.43
LINC00378-202ENST00000455894 SPATA31A7Q8IWB4 1347 aa17.72■□□□□ 0.43
LINC00378-202ENST00000455894 NPC1L1Q9UHC9 1359 aa17.71■□□□□ 0.43
LINC00378-202ENST00000455894 TNNT2P45379 298 aaPredicted RBP17.71■□□□□ 0.43
LINC00378-202ENST00000455894 RGPD5Q99666 1765 aa17.71■□□□□ 0.43
LINC00378-202ENST00000455894 RTL1A6NKG5 1358 aa17.7■□□□□ 0.42
LINC00378-202ENST00000455894 HOXC9P31274 260 aa17.7■□□□□ 0.42
LINC00378-202ENST00000455894 CC2D1BQ5T0F9 858 aaKnown RBP17.7■□□□□ 0.42
LINC00378-202ENST00000455894 GLI3P10071 1580 aa17.7■□□□□ 0.42
LINC00378-202ENST00000455894 WDR17Q8IZU2 1322 aa17.7■□□□□ 0.42
LINC00378-202ENST00000455894 ZNF316A6NFI3 1004 aaPredicted RBP17.69■□□□□ 0.42
LINC00378-202ENST00000455894 CSB-PGBD3P0DP91 1061 aa17.69■□□□□ 0.42
LINC00378-202ENST00000455894 DDX10Q13206 875 aaKnown RBP17.69■□□□□ 0.42
LINC00378-202ENST00000455894 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
LINC00378-202ENST00000455894 BLMP54132 1417 aaPredicted RBP17.69■□□□□ 0.42
LINC00378-202ENST00000455894 SPATA31A1Q5TZJ5 1347 aa17.69■□□□□ 0.42
LINC00378-202ENST00000455894 CDK12Q9NYV4 1490 aaPredicted RBP17.69■□□□□ 0.42
LINC00378-202ENST00000455894 TOM1L2Q6ZVM7 507 aa17.68■□□□□ 0.42
LINC00378-202ENST00000455894 ANKRD24Q8TF21 1146 aa17.68■□□□□ 0.42
LINC00378-202ENST00000455894 MAP2P11137 1827 aaKnown RBP17.68■□□□□ 0.42
LINC00378-202ENST00000455894 KIF24Q5T7B8 1368 aa17.67■□□□□ 0.42
LINC00378-202ENST00000455894 CRB1P82279 1406 aa17.67■□□□□ 0.42
LINC00378-202ENST00000455894 CNGB1Q14028 1251 aaPredicted RBP17.67■□□□□ 0.42
LINC00378-202ENST00000455894 USP35Q9P2H5 1018 aa17.67■□□□□ 0.42
LINC00378-202ENST00000455894 POLKQ9UBT6 870 aa17.67■□□□□ 0.42
LINC00378-202ENST00000455894 ERBB3P21860 1342 aa17.67■□□□□ 0.42
LINC00378-202ENST00000455894 FLT4P35916 1363 aa17.66■□□□□ 0.42
LINC00378-202ENST00000455894 PPM1GO15355 546 aaPredicted RBP17.66■□□□□ 0.42
LINC00378-202ENST00000455894 LTV1Q96GA3 475 aaPredicted RBP17.66■□□□□ 0.42
LINC00378-202ENST00000455894 RGS12O14924 1447 aa17.65■□□□□ 0.42
LINC00378-202ENST00000455894 ONECUT3O60422 494 aaPredicted RBP17.65■□□□□ 0.42
LINC00378-202ENST00000455894 FAM98CQ17RN3 349 aaKnown RBP17.65■□□□□ 0.42
LINC00378-202ENST00000455894 HSP90AB2PQ58FF8 381 aa17.65■□□□□ 0.42
LINC00378-202ENST00000455894 TCP11L2Q8N4U5 519 aa17.65■□□□□ 0.42
LINC00378-202ENST00000455894 CARD10Q9BWT7 1032 aa17.65■□□□□ 0.42
LINC00378-202ENST00000455894 INSRP06213 1382 aa17.65■□□□□ 0.42
LINC00378-202ENST00000455894 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
LINC00378-202ENST00000455894 NLRP2Q9NX02 1062 aa17.64■□□□□ 0.41
LINC00378-202ENST00000455894 THRAP3Q9Y2W1 955 aaKnown RBP17.64■□□□□ 0.41
LINC00378-202ENST00000455894 BARGINQ6ZT62 677 aa17.63■□□□□ 0.41
LINC00378-202ENST00000455894 SEPT12Q8IYM1 358 aa17.63■□□□□ 0.41
LINC00378-202ENST00000455894 A0A0G2JS52 829 aa17.62■□□□□ 0.41
LINC00378-202ENST00000455894 MYT1Q01538 1121 aa17.62■□□□□ 0.41
LINC00378-202ENST00000455894 SMG6Q86US8 1419 aaKnown RBP17.61■□□□□ 0.41
LINC00378-202ENST00000455894 FAM208AQ9UK61 1670 aaKnown RBP17.58■□□□□ 0.41
LINC00378-202ENST00000455894 MTHFSP49914 203 aa17.58■□□□□ 0.4
LINC00378-202ENST00000455894 CDCA7Q9BWT1 371 aaPredicted RBP17.58■□□□□ 0.4
LINC00378-202ENST00000455894 THSD7AQ9UPZ6 1657 aa17.58■□□□□ 0.4
LINC00378-202ENST00000455894 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
LINC00378-202ENST00000455894 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
LINC00378-202ENST00000455894 EIF4A2Q14240 407 aaKnown RBP17.56■□□□□ 0.4
LINC00378-202ENST00000455894 KRT27Q7Z3Y8 459 aa17.55■□□□□ 0.4
LINC00378-202ENST00000455894 BRWD3Q6RI45 1802 aa17.55■□□□□ 0.4
LINC00378-202ENST00000455894 RGPD2P0DJD1 1756 aa17.55■□□□□ 0.4
LINC00378-202ENST00000455894 IL2RBP14784 551 aa17.54■□□□□ 0.4
LINC00378-202ENST00000455894 PPP2R1AP30153 589 aa17.54■□□□□ 0.4
LINC00378-202ENST00000455894 DISP2A7MBM2 1401 aa17.54■□□□□ 0.4
LINC00378-202ENST00000455894 PARD3Q8TEW0 1356 aa17.53■□□□□ 0.4
LINC00378-202ENST00000455894 DDB1Q16531 1140 aa17.53■□□□□ 0.4
LINC00378-202ENST00000455894 USHBP1Q8N6Y0 703 aa17.53■□□□□ 0.4
LINC00378-202ENST00000455894 WNK3Q9BYP7 1800 aa17.53■□□□□ 0.4
LINC00378-202ENST00000455894 PDE3BQ13370 1112 aa17.52■□□□□ 0.4
LINC00378-202ENST00000455894 RALBP1Q15311 655 aa17.52■□□□□ 0.4
LINC00378-202ENST00000455894 EYA1Q99502 592 aa17.52■□□□□ 0.4
LINC00378-202ENST00000455894 PARP4Q9UKK3 1724 aaKnown RBP17.52■□□□□ 0.39
LINC00378-202ENST00000455894 EXOC5O00471 708 aa17.51■□□□□ 0.39
LINC00378-202ENST00000455894 SOCS7O14512 581 aa17.5■□□□□ 0.39
LINC00378-202ENST00000455894 IL13P35225 146 aa17.5■□□□□ 0.39
LINC00378-202ENST00000455894 CFAP53Q96M91 514 aa17.5■□□□□ 0.39
LINC00378-202ENST00000455894 DIAPH1O60610 1272 aaKnown RBP17.49■□□□□ 0.39
LINC00378-202ENST00000455894 TATP17735 454 aaPredicted RBP17.49■□□□□ 0.39
LINC00378-202ENST00000455894 RAPGEF4Q8WZA2 1011 aa17.49■□□□□ 0.39
LINC00378-202ENST00000455894 IGSF1Q8N6C5 1336 aa17.48■□□□□ 0.39
LINC00378-202ENST00000455894 NCAPD2Q15021 1401 aa17.48■□□□□ 0.39
LINC00378-202ENST00000455894 LRRC37A3O60309 1634 aa17.47■□□□□ 0.39
LINC00378-202ENST00000455894 FAM182BQ5T319 152 aa17.47■□□□□ 0.39
LINC00378-202ENST00000455894 MEGF6O75095 1541 aa17.47■□□□□ 0.39
LINC00378-202ENST00000455894 TNS2Q63HR2 1409 aa17.47■□□□□ 0.39
LINC00378-202ENST00000455894 COL3A1P02461 1466 aaPredicted RBP17.46■□□□□ 0.39
LINC00378-202ENST00000455894 OVOS2A0A0G2JMS6 1433 aa17.46■□□□□ 0.39
LINC00378-202ENST00000455894 FAM196AQ6ZSG2 479 aa17.45■□□□□ 0.38
LINC00378-202ENST00000455894 MARCH10Q8NA82 808 aaPredicted RBP17.45■□□□□ 0.38
LINC00378-202ENST00000455894 ZCRB1Q8TBF4 217 aaKnown RBP17.45■□□□□ 0.38
LINC00378-202ENST00000455894 PRKRIP1Q9H875 184 aaPredicted RBP17.45■□□□□ 0.38
LINC00378-202ENST00000455894 UPF1Q92900 1129 aaKnown RBP eCLIP17.44■□□□□ 0.38
LINC00378-202ENST00000455894 MYBBP1AQ9BQG0 1328 aaKnown RBP17.44■□□□□ 0.38
LINC00378-202ENST00000455894 SULT6B1Q6IMI4 303 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms