RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 VPS72Q15906 364 aa9.76□□□□□ -0.85
COMMD1-205ENST00000455659 COG3Q96JB2 828 aa9.76□□□□□ -0.85
COMMD1-205ENST00000455659 STRN4Q9NRL3 753 aa9.76□□□□□ -0.85
COMMD1-205ENST00000455659 MAP2P11137 1827 aaKnown RBP9.76□□□□□ -0.85
COMMD1-205ENST00000455659 CGNL1Q0VF96 1302 aa9.76□□□□□ -0.85
COMMD1-205ENST00000455659 RGPD2P0DJD1 1756 aa9.75□□□□□ -0.85
COMMD1-205ENST00000455659 BLMP54132 1417 aaPredicted RBP9.75□□□□□ -0.85
COMMD1-205ENST00000455659 CRB1P82279 1406 aa9.75□□□□□ -0.85
COMMD1-205ENST00000455659 C11orf95C9JLR9 678 aaPredicted RBP9.75□□□□□ -0.85
COMMD1-205ENST00000455659 GJD4Q96KN9 370 aaPredicted RBP9.75□□□□□ -0.85
COMMD1-205ENST00000455659 NSD2O96028 1365 aa9.75□□□□□ -0.85
COMMD1-205ENST00000455659 A0A0G2JS52 829 aa9.74□□□□□ -0.85
COMMD1-205ENST00000455659 MYT1Q01538 1121 aa9.74□□□□□ -0.85
COMMD1-205ENST00000455659 ARHGEF25Q86VW2 580 aa9.74□□□□□ -0.85
COMMD1-205ENST00000455659 CARD14Q9BXL6 1004 aa9.74□□□□□ -0.85
COMMD1-205ENST00000455659 GGNBP2Q9H3C7 697 aa9.74□□□□□ -0.85
COMMD1-205ENST00000455659 SPATA31A5Q5VU36 1347 aa9.74□□□□□ -0.85
COMMD1-205ENST00000455659 SPATA31A7Q8IWB4 1347 aa9.74□□□□□ -0.85
COMMD1-205ENST00000455659 PANK3Q9H999 370 aa9.73□□□□□ -0.85
COMMD1-205ENST00000455659 SPATA31A1Q5TZJ5 1347 aa9.73□□□□□ -0.85
COMMD1-205ENST00000455659 WASHC2AQ641Q2 1341 aa9.73□□□□□ -0.85
COMMD1-205ENST00000455659 SMG6Q86US8 1419 aaKnown RBP9.73□□□□□ -0.85
COMMD1-205ENST00000455659 SOCS7O14512 581 aa9.72□□□□□ -0.85
COMMD1-205ENST00000455659 FYB1O15117 783 aa9.72□□□□□ -0.85
COMMD1-205ENST00000455659 EVA1CP58658 441 aa9.72□□□□□ -0.85
COMMD1-205ENST00000455659 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
COMMD1-205ENST00000455659 ERBB3P21860 1342 aa9.72□□□□□ -0.85
COMMD1-205ENST00000455659 WDR17Q8IZU2 1322 aa9.72□□□□□ -0.85
COMMD1-205ENST00000455659 RGPD1P0DJD0 1748 aa9.71□□□□□ -0.85
COMMD1-205ENST00000455659 CSB-PGBD3P0DP91 1061 aa9.71□□□□□ -0.86
COMMD1-205ENST00000455659 FAM98CQ17RN3 349 aaKnown RBP9.71□□□□□ -0.86
COMMD1-205ENST00000455659 USP35Q9P2H5 1018 aa9.71□□□□□ -0.86
COMMD1-205ENST00000455659 MAP3K19Q56UN5 1328 aa9.71□□□□□ -0.86
COMMD1-205ENST00000455659 FLT4P35916 1363 aa9.71□□□□□ -0.86
COMMD1-205ENST00000455659 TNS1Q9HBL0 1735 aaKnown RBP9.7□□□□□ -0.86
COMMD1-205ENST00000455659 ZEB1P37275 1124 aaPredicted RBP9.7□□□□□ -0.86
COMMD1-205ENST00000455659 RRS1Q15050 365 aaKnown RBP9.7□□□□□ -0.86
COMMD1-205ENST00000455659 TOM1L2Q6ZVM7 507 aa9.7□□□□□ -0.86
COMMD1-205ENST00000455659 KIF24Q5T7B8 1368 aa9.7□□□□□ -0.86
COMMD1-205ENST00000455659 TNS2Q63HR2 1409 aa9.7□□□□□ -0.86
COMMD1-205ENST00000455659 SHANK3Q9BYB0 1731 aa9.7□□□□□ -0.86
COMMD1-205ENST00000455659 DISP2A7MBM2 1401 aa9.69□□□□□ -0.86
COMMD1-205ENST00000455659 AMPHP49418 695 aa9.69□□□□□ -0.86
COMMD1-205ENST00000455659 SEPT12Q8IYM1 358 aa9.69□□□□□ -0.86
COMMD1-205ENST00000455659 TCP11L2Q8N4U5 519 aa9.69□□□□□ -0.86
COMMD1-205ENST00000455659 AXIN2Q9Y2T1 843 aa9.69□□□□□ -0.86
COMMD1-205ENST00000455659 KNSTRNQ9Y448 316 aa9.69□□□□□ -0.86
COMMD1-205ENST00000455659 HOXC9P31274 260 aa9.68□□□□□ -0.86
COMMD1-205ENST00000455659 FBLN1P23142 703 aa9.67□□□□□ -0.86
COMMD1-205ENST00000455659 BARGINQ6ZT62 677 aa9.67□□□□□ -0.86
COMMD1-205ENST00000455659 ANKRD24Q8TF21 1146 aa9.67□□□□□ -0.86
COMMD1-205ENST00000455659 IP6K1Q92551 441 aa9.67□□□□□ -0.86
COMMD1-205ENST00000455659 THRAP3Q9Y2W1 955 aaKnown RBP9.67□□□□□ -0.86
COMMD1-205ENST00000455659 SBF2Q86WG5 1849 aa9.67□□□□□ -0.86
COMMD1-205ENST00000455659 PKD1L3Q7Z443 1732 aa9.67□□□□□ -0.86
COMMD1-205ENST00000455659 INSRP06213 1382 aa9.66□□□□□ -0.86
COMMD1-205ENST00000455659 DOT1LQ8TEK3 1739 aa9.66□□□□□ -0.86
COMMD1-205ENST00000455659 TNNT2P45379 298 aaPredicted RBP9.66□□□□□ -0.86
COMMD1-205ENST00000455659 AMER1Q5JTC6 1135 aaPredicted RBP9.66□□□□□ -0.86
COMMD1-205ENST00000455659 LTV1Q96GA3 475 aaPredicted RBP9.66□□□□□ -0.86
COMMD1-205ENST00000455659 NLRP2Q9NX02 1062 aa9.66□□□□□ -0.86
COMMD1-205ENST00000455659 EMILIN1Q9Y6C2 1016 aa9.66□□□□□ -0.86
COMMD1-205ENST00000455659 MEGF6O75095 1541 aa9.66□□□□□ -0.86
COMMD1-205ENST00000455659 OVOS2A0A0G2JMS6 1433 aa9.65□□□□□ -0.86
COMMD1-205ENST00000455659 NPC1L1Q9UHC9 1359 aa9.65□□□□□ -0.86
COMMD1-205ENST00000455659 NHSQ6T4R5 1651 aa9.65□□□□□ -0.86
COMMD1-205ENST00000455659 PPM1GO15355 546 aaPredicted RBP9.65□□□□□ -0.86
COMMD1-205ENST00000455659 ONECUT3O60422 494 aaPredicted RBP9.65□□□□□ -0.86
COMMD1-205ENST00000455659 KRT27Q7Z3Y8 459 aa9.65□□□□□ -0.86
COMMD1-205ENST00000455659 CARD10Q9BWT7 1032 aa9.65□□□□□ -0.86
COMMD1-205ENST00000455659 MORC1Q86VD1 984 aa9.64□□□□□ -0.87
COMMD1-205ENST00000455659 RGPD3A6NKT7 1758 aaPredicted RBP9.64□□□□□ -0.87
COMMD1-205ENST00000455659 RGPD4Q7Z3J3 1758 aa9.64□□□□□ -0.87
COMMD1-205ENST00000455659 NCAPD2Q15021 1401 aa9.64□□□□□ -0.87
COMMD1-205ENST00000455659 KAT6BQ8WYB5 2073 aa9.63□□□□□ -0.87
COMMD1-205ENST00000455659 HSP90AB2PQ58FF8 381 aa9.63□□□□□ -0.87
COMMD1-205ENST00000455659 CC2D1BQ5T0F9 858 aaKnown RBP9.63□□□□□ -0.87
COMMD1-205ENST00000455659 CDCA7Q9BWT1 371 aaPredicted RBP9.63□□□□□ -0.87
COMMD1-205ENST00000455659 COL3A1P02461 1466 aaPredicted RBP9.62□□□□□ -0.87
COMMD1-205ENST00000455659 CNGB1Q14028 1251 aaPredicted RBP9.62□□□□□ -0.87
COMMD1-205ENST00000455659 DDB1Q16531 1140 aa9.62□□□□□ -0.87
COMMD1-205ENST00000455659 UPF1Q92900 1129 aaKnown RBP eCLIP9.62□□□□□ -0.87
COMMD1-205ENST00000455659 POLKQ9UBT6 870 aa9.62□□□□□ -0.87
COMMD1-205ENST00000455659 RREB1Q92766 1687 aa9.61□□□□□ -0.87
COMMD1-205ENST00000455659 PER1O15534 1290 aaPredicted RBP9.61□□□□□ -0.87
COMMD1-205ENST00000455659 IL2RBP14784 551 aa9.61□□□□□ -0.87
COMMD1-205ENST00000455659 PDE3BQ13370 1112 aa9.61□□□□□ -0.87
COMMD1-205ENST00000455659 FAM182BQ5T319 152 aa9.61□□□□□ -0.87
COMMD1-205ENST00000455659 USHBP1Q8N6Y0 703 aa9.61□□□□□ -0.87
COMMD1-205ENST00000455659 TOGARAM1Q9Y4F4 1720 aa9.61□□□□□ -0.87
COMMD1-205ENST00000455659 BTAF1O14981 1849 aa9.61□□□□□ -0.87
COMMD1-205ENST00000455659 NUP188Q5SRE5 1749 aa9.59□□□□□ -0.87
COMMD1-205ENST00000455659 VIRMAQ69YN4 1812 aaKnown RBP9.59□□□□□ -0.87
COMMD1-205ENST00000455659 NBPF6Q5VWK0 638 aa9.59□□□□□ -0.87
COMMD1-205ENST00000455659 NBPF4Q96M43 638 aa9.59□□□□□ -0.87
COMMD1-205ENST00000455659 BCL9O00512 1426 aa9.58□□□□□ -0.88
COMMD1-205ENST00000455659 SF3B2Q13435 895 aaKnown RBP9.58□□□□□ -0.88
COMMD1-205ENST00000455659 EIF4A2Q14240 407 aaKnown RBP9.58□□□□□ -0.88
COMMD1-205ENST00000455659 RAPGEF4Q8WZA2 1011 aa9.58□□□□□ -0.88
COMMD1-205ENST00000455659 PARD3Q8TEW0 1356 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms