RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 CASZ1Q86V15 1759 aa37.04■■■■□ 3.52
NEK6-211ENST00000454453 DDB1Q16531 1140 aa37.03■■■■□ 3.52
NEK6-211ENST00000454453 NINLQ9Y2I6 1382 aa37.02■■■■□ 3.52
NEK6-211ENST00000454453 TOM1L2Q6ZVM7 507 aa37■■■■□ 3.51
NEK6-211ENST00000454453 PDGFDQ9GZP0 370 aaPredicted RBP37■■■■□ 3.51
NEK6-211ENST00000454453 PROM2Q8N271 834 aa36.99■■■■□ 3.51
NEK6-211ENST00000454453 MARCH10Q8NA82 808 aaPredicted RBP36.99■■■■□ 3.51
NEK6-211ENST00000454453 BCL11BQ9C0K0 894 aaPredicted RBP36.98■■■■□ 3.51
NEK6-211ENST00000454453 WDR17Q8IZU2 1322 aa36.97■■■■□ 3.51
NEK6-211ENST00000454453 CPSF1Q10570 1443 aaKnown RBP36.95■■■■□ 3.51
NEK6-211ENST00000454453 BCL9O00512 1426 aa36.94■■■■□ 3.5
NEK6-211ENST00000454453 RGPD5Q99666 1765 aa36.93■■■■□ 3.5
NEK6-211ENST00000454453 ARHGEF25Q86VW2 580 aa36.92■■■■□ 3.5
NEK6-211ENST00000454453 AKAP12Q02952 1782 aa36.91■■■■□ 3.5
NEK6-211ENST00000454453 TTC21BQ7Z4L5 1316 aa36.87■■■■□ 3.49
NEK6-211ENST00000454453 MYOM1P52179 1685 aa36.86■■■■□ 3.49
NEK6-211ENST00000454453 CDCA7Q9BWT1 371 aaPredicted RBP36.86■■■■□ 3.49
NEK6-211ENST00000454453 TRPM1Q7Z4N2 1603 aa36.85■■■■□ 3.49
NEK6-211ENST00000454453 ZBTB7AO95365 584 aa36.85■■■■□ 3.49
NEK6-211ENST00000454453 PTGER2P43116 358 aa36.85■■■■□ 3.49
NEK6-211ENST00000454453 CARD10Q9BWT7 1032 aa36.85■■■■□ 3.49
NEK6-211ENST00000454453 NFAT5O94916 1531 aa36.84■■■■□ 3.49
NEK6-211ENST00000454453 EVC2Q86UK5 1308 aa36.84■■■■□ 3.49
NEK6-211ENST00000454453 UTRNP46939 3433 aa36.83■■■■□ 3.49
NEK6-211ENST00000454453 SOX12O15370 315 aa36.82■■■■□ 3.48
NEK6-211ENST00000454453 DCAF8L1A6NGE4 600 aa36.81■■■■□ 3.48
NEK6-211ENST00000454453 TXNRD1Q16881 649 aa36.81■■■■□ 3.48
NEK6-211ENST00000454453 L3MBTL2Q969R5 705 aa36.81■■■■□ 3.48
NEK6-211ENST00000454453 KCNH5Q8NCM2 988 aa36.8■■■■□ 3.48
NEK6-211ENST00000454453 ZNF692Q9BU19 519 aaPredicted RBP36.78■■■■□ 3.48
NEK6-211ENST00000454453 ATF5Q9Y2D1 282 aaPredicted RBP36.78■■■■□ 3.48
NEK6-211ENST00000454453 CSB-PGBD3P0DP91 1061 aa36.77■■■■□ 3.48
NEK6-211ENST00000454453 SLC15A2Q16348 729 aa36.76■■■■□ 3.48
NEK6-211ENST00000454453 TTC21AQ8NDW8 1320 aa36.76■■■■□ 3.47
NEK6-211ENST00000454453 EXOC5O00471 708 aa36.75■■■■□ 3.47
NEK6-211ENST00000454453 STK32BQ9NY57 414 aa36.74■■■■□ 3.47
NEK6-211ENST00000454453 TNS2Q63HR2 1409 aa36.74■■■■□ 3.47
NEK6-211ENST00000454453 CCDC7Q96M83 1385 aa36.72■■■■□ 3.47
NEK6-211ENST00000454453 NHSQ6T4R5 1651 aa36.71■■■■□ 3.47
NEK6-211ENST00000454453 ABCC6O95255 1503 aa36.71■■■■□ 3.47
NEK6-211ENST00000454453 SGIP1Q9BQI5 828 aa36.7■■■■□ 3.47
NEK6-211ENST00000454453 KTN1Q86UP2 1357 aaKnown RBP36.68■■■■□ 3.46
NEK6-211ENST00000454453 FHDC1Q9C0D6 1143 aaPredicted RBP36.68■■■■□ 3.46
NEK6-211ENST00000454453 MON2Q7Z3U7 1717 aa36.68■■■■□ 3.46
NEK6-211ENST00000454453 SYT17Q9BSW7 474 aa36.67■■■■□ 3.46
NEK6-211ENST00000454453 PAPPAQ13219 1627 aa36.67■■■■□ 3.46
NEK6-211ENST00000454453 ACSBG1Q96GR2 724 aa36.65■■■■□ 3.46
NEK6-211ENST00000454453 ROCK2O75116 1388 aaKnown RBP36.65■■■■□ 3.46
NEK6-211ENST00000454453 SIN3AQ96ST3 1273 aa36.64■■■■□ 3.46
NEK6-211ENST00000454453 MTFR1LQ9H019 292 aa36.64■■■■□ 3.46
NEK6-211ENST00000454453 ZNF784Q8NCA9 323 aaPredicted RBP36.63■■■■□ 3.45
NEK6-211ENST00000454453 USP54Q70EL1 1684 aa36.63■■■■□ 3.45
NEK6-211ENST00000454453 USP31Q70CQ4 1352 aa36.62■■■■□ 3.45
NEK6-211ENST00000454453 ERBB3P21860 1342 aa36.61■■■■□ 3.45
NEK6-211ENST00000454453 CD163L1Q9NR16 1453 aa36.6■■■■□ 3.45
NEK6-211ENST00000454453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.58■■■■□ 3.45
NEK6-211ENST00000454453 LTN1O94822 1766 aa36.57■■■■□ 3.44
NEK6-211ENST00000454453 BTAF1O14981 1849 aa36.57■■■■□ 3.44
NEK6-211ENST00000454453 NME9Q86XW9 330 aa36.56■■■■□ 3.44
NEK6-211ENST00000454453 NLRP2Q9NX02 1062 aa36.56■■■■□ 3.44
NEK6-211ENST00000454453 SBNO2Q9Y2G9 1366 aa36.55■■■■□ 3.44
NEK6-211ENST00000454453 ZNF827Q17R98 1081 aa36.54■■■■□ 3.44
NEK6-211ENST00000454453 IL2RBP14784 551 aa36.53■■■■□ 3.44
NEK6-211ENST00000454453 LRRC4BQ9NT99 713 aa36.52■■■■□ 3.44
NEK6-211ENST00000454453 ARXQ96QS3 562 aa36.5■■■■□ 3.43
NEK6-211ENST00000454453 ANKRD24Q8TF21 1146 aa36.49■■■■□ 3.43
NEK6-211ENST00000454453 NEUROD1Q13562 356 aa36.48■■■■□ 3.43
NEK6-211ENST00000454453 MAP3K5Q99683 1374 aa36.47■■■■□ 3.43
NEK6-211ENST00000454453 CHD4Q14839 1912 aa36.46■■■■□ 3.43
NEK6-211ENST00000454453 AKT1S1Q96B36 256 aa36.42■■■■□ 3.42
NEK6-211ENST00000454453 SLC12A5Q9H2X9 1139 aa36.42■■■■□ 3.42
NEK6-211ENST00000454453 TMC1Q8TDI8 760 aa36.39■■■■□ 3.42
NEK6-211ENST00000454453 EDC4Q6P2E9 1401 aaKnown RBP36.39■■■■□ 3.42
NEK6-211ENST00000454453 COL24A1Q17RW2 1714 aa36.38■■■■□ 3.41
NEK6-211ENST00000454453 QSER1Q2KHR3 1735 aa36.38■■■■□ 3.41
NEK6-211ENST00000454453 A0A1W2PP64 1363 aa36.36■■■■□ 3.41
NEK6-211ENST00000454453 GOLGB1Q14789 3259 aaKnown RBP36.35■■■■□ 3.41
NEK6-211ENST00000454453 HDGFL2Q7Z4V5 671 aaPredicted RBP36.35■■■■□ 3.41
NEK6-211ENST00000454453 TUBGCP6Q96RT7 1819 aa36.34■■■■□ 3.41
NEK6-211ENST00000454453 KAT6BQ8WYB5 2073 aa36.34■■■■□ 3.41
NEK6-211ENST00000454453 PNPLA7Q6ZV29 1317 aa36.34■■■■□ 3.41
NEK6-211ENST00000454453 DDX54Q8TDD1 881 aaKnown RBP36.33■■■■□ 3.41
NEK6-211ENST00000454453 IP6K1Q92551 441 aa36.33■■■■□ 3.41
NEK6-211ENST00000454453 KCNQ4P56696 695 aa36.32■■■■□ 3.4
NEK6-211ENST00000454453 CARD11Q9BXL7 1154 aa36.32■■■■□ 3.4
NEK6-211ENST00000454453 SLC27A3Q5K4L6 730 aa36.31■■■■□ 3.4
NEK6-211ENST00000454453 FAM208AQ9UK61 1670 aaKnown RBP36.3■■■■□ 3.4
NEK6-211ENST00000454453 C1QTNF8P60827 252 aa36.3■■■■□ 3.4
NEK6-211ENST00000454453 SLC16A10Q8TF71 515 aa36.29■■■■□ 3.4
NEK6-211ENST00000454453 LTV1Q96GA3 475 aaPredicted RBP36.29■■■■□ 3.4
NEK6-211ENST00000454453 NSD2O96028 1365 aa36.28■■■■□ 3.4
NEK6-211ENST00000454453 GPR162Q16538 588 aa36.28■■■■□ 3.4
NEK6-211ENST00000454453 DOT1LQ8TEK3 1739 aa36.28■■■■□ 3.4
NEK6-211ENST00000454453 SHANK3Q9BYB0 1731 aa36.28■■■■□ 3.4
NEK6-211ENST00000454453 SENP3-EIF4A1A0A087X0R7 540 aa36.26■■■■□ 3.4
NEK6-211ENST00000454453 LY75O60449 1722 aa36.25■■■■□ 3.39
NEK6-211ENST00000454453 PRIM1P49642 420 aaKnown RBP36.25■■■■□ 3.39
NEK6-211ENST00000454453 TERF2IPQ9NYB0 399 aa36.25■■■■□ 3.39
NEK6-211ENST00000454453 ANKRD36BQ8N2N9 1353 aa36.25■■■■□ 3.39
NEK6-211ENST00000454453 KLHL34Q8N239 644 aa36.24■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms