RNA–Protein interactions for RNA: ENST00000453863.5

RNF220-206, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-206ENST00000453863 NSD3Q9BZ95 1437 aa12.55□□□□□ -0.4
RNF220-206ENST00000453863 FAM98CQ17RN3 349 aaKnown RBP12.55□□□□□ -0.4
RNF220-206ENST00000453863 ARHGEF25Q86VW2 580 aa12.55□□□□□ -0.4
RNF220-206ENST00000453863 SEPT12Q8IYM1 358 aa12.55□□□□□ -0.4
RNF220-206ENST00000453863 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
RNF220-206ENST00000453863 WNK3Q9BYP7 1800 aa12.54□□□□□ -0.4
RNF220-206ENST00000453863 CSB-PGBD3P0DP91 1061 aa12.54□□□□□ -0.4
RNF220-206ENST00000453863 THRAP3Q9Y2W1 955 aaKnown RBP12.54□□□□□ -0.4
RNF220-206ENST00000453863 CGNL1Q0VF96 1302 aa12.54□□□□□ -0.4
RNF220-206ENST00000453863 WDR17Q8IZU2 1322 aa12.54□□□□□ -0.4
RNF220-206ENST00000453863 RTL1A6NKG5 1358 aa12.54□□□□□ -0.4
RNF220-206ENST00000453863 ONECUT3O60422 494 aaPredicted RBP12.53□□□□□ -0.4
RNF220-206ENST00000453863 TOM1L2Q6ZVM7 507 aa12.53□□□□□ -0.4
RNF220-206ENST00000453863 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
RNF220-206ENST00000453863 TCP11L2Q8N4U5 519 aa12.53□□□□□ -0.4
RNF220-206ENST00000453863 PARP4Q9UKK3 1724 aaKnown RBP12.53□□□□□ -0.4
RNF220-206ENST00000453863 ANKRD26Q9UPS8 1709 aa12.53□□□□□ -0.4
RNF220-206ENST00000453863 RGPD5Q99666 1765 aa12.52□□□□□ -0.41
RNF220-206ENST00000453863 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.41
RNF220-206ENST00000453863 BARGINQ6ZT62 677 aa12.52□□□□□ -0.41
RNF220-206ENST00000453863 UPF1Q92900 1129 aaKnown RBP eCLIP12.52□□□□□ -0.41
RNF220-206ENST00000453863 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
RNF220-206ENST00000453863 CCDC7Q96M83 1385 aa12.52□□□□□ -0.41
RNF220-206ENST00000453863 SMG6Q86US8 1419 aaKnown RBP12.52□□□□□ -0.41
RNF220-206ENST00000453863 CCDC125Q86Z20 511 aa12.51□□□□□ -0.41
RNF220-206ENST00000453863 CDCA7Q9BWT1 371 aaPredicted RBP12.51□□□□□ -0.41
RNF220-206ENST00000453863 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
RNF220-206ENST00000453863 SF3B2Q13435 895 aaKnown RBP12.5□□□□□ -0.41
RNF220-206ENST00000453863 NSD2O96028 1365 aa12.5□□□□□ -0.41
RNF220-206ENST00000453863 RGPD1P0DJD0 1748 aa12.5□□□□□ -0.41
RNF220-206ENST00000453863 LRRC37A3O60309 1634 aa12.49□□□□□ -0.41
RNF220-206ENST00000453863 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
RNF220-206ENST00000453863 ERBB3P21860 1342 aa12.49□□□□□ -0.41
RNF220-206ENST00000453863 C11orf95C9JLR9 678 aaPredicted RBP12.49□□□□□ -0.41
RNF220-206ENST00000453863 AMPHP49418 695 aa12.49□□□□□ -0.41
RNF220-206ENST00000453863 GGNBP2Q9H3C7 697 aa12.49□□□□□ -0.41
RNF220-206ENST00000453863 EP400Q96L91 3159 aa12.49□□□□□ -0.41
RNF220-206ENST00000453863 FYB1O15117 783 aa12.48□□□□□ -0.41
RNF220-206ENST00000453863 PDE3BQ13370 1112 aa12.48□□□□□ -0.41
RNF220-206ENST00000453863 FLT4P35916 1363 aa12.47□□□□□ -0.41
RNF220-206ENST00000453863 MAP3K19Q56UN5 1328 aa12.47□□□□□ -0.41
RNF220-206ENST00000453863 CARD10Q9BWT7 1032 aa12.47□□□□□ -0.41
RNF220-206ENST00000453863 KIF7Q2M1P5 1343 aa12.46□□□□□ -0.41
RNF220-206ENST00000453863 ANKRD24Q8TF21 1146 aa12.46□□□□□ -0.41
RNF220-206ENST00000453863 IP6K1Q92551 441 aa12.46□□□□□ -0.41
RNF220-206ENST00000453863 NLRP2Q9NX02 1062 aa12.46□□□□□ -0.41
RNF220-206ENST00000453863 AXIN2Q9Y2T1 843 aa12.46□□□□□ -0.41
RNF220-206ENST00000453863 OVOS2A0A0G2JMS6 1433 aa12.45□□□□□ -0.42
RNF220-206ENST00000453863 DDB1Q16531 1140 aa12.45□□□□□ -0.42
RNF220-206ENST00000453863 FAM196AQ6ZSG2 479 aa12.45□□□□□ -0.42
RNF220-206ENST00000453863 CARD14Q9BXL6 1004 aa12.45□□□□□ -0.42
RNF220-206ENST00000453863 KNSTRNQ9Y448 316 aa12.45□□□□□ -0.42
RNF220-206ENST00000453863 TNS2Q63HR2 1409 aa12.45□□□□□ -0.42
RNF220-206ENST00000453863 HOXC9P31274 260 aa12.44□□□□□ -0.42
RNF220-206ENST00000453863 PANK3Q9H999 370 aa12.44□□□□□ -0.42
RNF220-206ENST00000453863 BAG6P46379 1132 aa12.43□□□□□ -0.42
RNF220-206ENST00000453863 DISP2A7MBM2 1401 aa12.43□□□□□ -0.42
RNF220-206ENST00000453863 INSRP06213 1382 aa12.43□□□□□ -0.42
RNF220-206ENST00000453863 TNS1Q9HBL0 1735 aaKnown RBP12.42□□□□□ -0.42
RNF220-206ENST00000453863 RRS1Q15050 365 aaKnown RBP12.42□□□□□ -0.42
RNF220-206ENST00000453863 PEAK1Q9H792 1746 aa12.42□□□□□ -0.42
RNF220-206ENST00000453863 IL2RBP14784 551 aa12.41□□□□□ -0.42
RNF220-206ENST00000453863 LTV1Q96GA3 475 aaPredicted RBP12.41□□□□□ -0.42
RNF220-206ENST00000453863 MAP2P11137 1827 aaKnown RBP12.41□□□□□ -0.42
RNF220-206ENST00000453863 EXOC5O00471 708 aa12.39□□□□□ -0.43
RNF220-206ENST00000453863 PPM1GO15355 546 aaPredicted RBP12.39□□□□□ -0.43
RNF220-206ENST00000453863 MORC1Q86VD1 984 aa12.39□□□□□ -0.43
RNF220-206ENST00000453863 PARD3Q8TEW0 1356 aa12.39□□□□□ -0.43
RNF220-206ENST00000453863 EMILIN1Q9Y6C2 1016 aa12.38□□□□□ -0.43
RNF220-206ENST00000453863 RGPD3A6NKT7 1758 aaPredicted RBP12.38□□□□□ -0.43
RNF220-206ENST00000453863 RGPD2P0DJD1 1756 aa12.38□□□□□ -0.43
RNF220-206ENST00000453863 RGPD4Q7Z3J3 1758 aa12.38□□□□□ -0.43
RNF220-206ENST00000453863 BCL9O00512 1426 aa12.37□□□□□ -0.43
RNF220-206ENST00000453863 TNNT2P45379 298 aaPredicted RBP12.37□□□□□ -0.43
RNF220-206ENST00000453863 FAM182BQ5T319 152 aa12.37□□□□□ -0.43
RNF220-206ENST00000453863 RAPGEF4Q8WZA2 1011 aa12.37□□□□□ -0.43
RNF220-206ENST00000453863 WASHC2AQ641Q2 1341 aa12.37□□□□□ -0.43
RNF220-206ENST00000453863 NPC1L1Q9UHC9 1359 aa12.36□□□□□ -0.43
RNF220-206ENST00000453863 TRIM37O94972 964 aa12.36□□□□□ -0.43
RNF220-206ENST00000453863 ZEB1P37275 1124 aaPredicted RBP12.36□□□□□ -0.43
RNF220-206ENST00000453863 SBF2Q86WG5 1849 aa12.36□□□□□ -0.43
RNF220-206ENST00000453863 NHSQ6T4R5 1651 aa12.35□□□□□ -0.43
RNF220-206ENST00000453863 FBLN1P23142 703 aa12.35□□□□□ -0.43
RNF220-206ENST00000453863 HSP90AB2PQ58FF8 381 aa12.35□□□□□ -0.43
RNF220-206ENST00000453863 PLEKHG2Q9H7P9 1386 aa12.34□□□□□ -0.43
RNF220-206ENST00000453863 MEGF6O75095 1541 aa12.34□□□□□ -0.43
RNF220-206ENST00000453863 TATP17735 454 aaPredicted RBP12.34□□□□□ -0.43
RNF220-206ENST00000453863 POLKQ9UBT6 870 aa12.34□□□□□ -0.43
RNF220-206ENST00000453863 RREB1Q92766 1687 aa12.33□□□□□ -0.44
RNF220-206ENST00000453863 APBA3O96018 575 aa12.33□□□□□ -0.44
RNF220-206ENST00000453863 AMER1Q5JTC6 1135 aaPredicted RBP12.33□□□□□ -0.44
RNF220-206ENST00000453863 DEFB132Q7Z7B7 95 aa12.33□□□□□ -0.44
RNF220-206ENST00000453863 MARCH10Q8NA82 808 aaPredicted RBP12.33□□□□□ -0.44
RNF220-206ENST00000453863 PKD1L3Q7Z443 1732 aa12.33□□□□□ -0.44
RNF220-206ENST00000453863 PCDH11XQ9BZA7 1347 aa12.33□□□□□ -0.44
RNF220-206ENST00000453863 PCDH11YQ9BZA8 1340 aa12.33□□□□□ -0.44
RNF220-206ENST00000453863 NCAPD2Q15021 1401 aa12.32□□□□□ -0.44
RNF220-206ENST00000453863 NBPF6Q5VWK0 638 aa12.32□□□□□ -0.44
RNF220-206ENST00000453863 NBPF4Q96M43 638 aa12.32□□□□□ -0.44
RNF220-206ENST00000453863 DOT1LQ8TEK3 1739 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms