RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 CPSF1Q10570 1443 aaKnown RBP13.32□□□□□ -0.28
CDC42EP3-203ENST00000453555 SSH2Q76I76 1423 aa13.32□□□□□ -0.28
CDC42EP3-203ENST00000453555 EVX2Q03828 476 aa13.32□□□□□ -0.28
CDC42EP3-203ENST00000453555 TESK2Q96S53 571 aa13.32□□□□□ -0.28
CDC42EP3-203ENST00000453555 TTC21BQ7Z4L5 1316 aa13.32□□□□□ -0.28
CDC42EP3-203ENST00000453555 USP47Q96K76 1375 aa13.32□□□□□ -0.28
CDC42EP3-203ENST00000453555 GCP02774 474 aa13.31□□□□□ -0.28
CDC42EP3-203ENST00000453555 SLC12A5Q9H2X9 1139 aa13.31□□□□□ -0.28
CDC42EP3-203ENST00000453555 STRN4Q9NRL3 753 aa13.31□□□□□ -0.28
CDC42EP3-203ENST00000453555 CD163L1Q9NR16 1453 aa13.3□□□□□ -0.28
CDC42EP3-203ENST00000453555 RGPD5Q99666 1765 aa13.3□□□□□ -0.28
CDC42EP3-203ENST00000453555 SLIT3O75094 1523 aa13.3□□□□□ -0.28
CDC42EP3-203ENST00000453555 A0A0G2JS52 829 aa13.3□□□□□ -0.28
CDC42EP3-203ENST00000453555 MYT1Q01538 1121 aa13.3□□□□□ -0.28
CDC42EP3-203ENST00000453555 SEPT12Q8IYM1 358 aa13.3□□□□□ -0.28
CDC42EP3-203ENST00000453555 LMO7Q8WWI1 1683 aa13.3□□□□□ -0.28
CDC42EP3-203ENST00000453555 CAMTA1Q9Y6Y1 1673 aa13.29□□□□□ -0.28
CDC42EP3-203ENST00000453555 FAM98CQ17RN3 349 aaKnown RBP13.29□□□□□ -0.28
CDC42EP3-203ENST00000453555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDC42EP3-203ENST00000453555 SOX12O15370 315 aa13.28□□□□□ -0.28
CDC42EP3-203ENST00000453555 EVA1CP58658 441 aa13.28□□□□□ -0.28
CDC42EP3-203ENST00000453555 HDGFL2Q7Z4V5 671 aaPredicted RBP13.28□□□□□ -0.28
CDC42EP3-203ENST00000453555 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
CDC42EP3-203ENST00000453555 SPATA31A5Q5VU36 1347 aa13.28□□□□□ -0.28
CDC42EP3-203ENST00000453555 SPATA31A7Q8IWB4 1347 aa13.28□□□□□ -0.28
CDC42EP3-203ENST00000453555 TTC21AQ8NDW8 1320 aa13.28□□□□□ -0.28
CDC42EP3-203ENST00000453555 CPDO75976 1380 aa13.28□□□□□ -0.28
CDC42EP3-203ENST00000453555 ONECUT3O60422 494 aaPredicted RBP13.27□□□□□ -0.29
CDC42EP3-203ENST00000453555 PUS7Q96PZ0 661 aaKnown RBP13.27□□□□□ -0.29
CDC42EP3-203ENST00000453555 COL18A1P39060 1754 aa13.27□□□□□ -0.29
CDC42EP3-203ENST00000453555 A0A1W2PP64 1363 aa13.26□□□□□ -0.29
CDC42EP3-203ENST00000453555 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
CDC42EP3-203ENST00000453555 TMF1P82094 1093 aa13.26□□□□□ -0.29
CDC42EP3-203ENST00000453555 NME9Q86XW9 330 aa13.26□□□□□ -0.29
CDC42EP3-203ENST00000453555 TERF2IPQ9NYB0 399 aa13.26□□□□□ -0.29
CDC42EP3-203ENST00000453555 USP35Q9P2H5 1018 aa13.26□□□□□ -0.29
CDC42EP3-203ENST00000453555 LTN1O94822 1766 aa13.25□□□□□ -0.29
CDC42EP3-203ENST00000453555 USP54Q70EL1 1684 aa13.25□□□□□ -0.29
CDC42EP3-203ENST00000453555 THSD7AQ9UPZ6 1657 aa13.25□□□□□ -0.29
CDC42EP3-203ENST00000453555 SPATA31A1Q5TZJ5 1347 aa13.25□□□□□ -0.29
CDC42EP3-203ENST00000453555 EDC4Q6P2E9 1401 aaKnown RBP13.24□□□□□ -0.29
CDC42EP3-203ENST00000453555 LARP1Q6PKG0 1096 aaKnown RBP13.24□□□□□ -0.29
CDC42EP3-203ENST00000453555 KRT27Q7Z3Y8 459 aa13.24□□□□□ -0.29
CDC42EP3-203ENST00000453555 KCNH5Q8NCM2 988 aa13.24□□□□□ -0.29
CDC42EP3-203ENST00000453555 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
CDC42EP3-203ENST00000453555 NFAT5O94916 1531 aa13.23□□□□□ -0.29
CDC42EP3-203ENST00000453555 AATKQ6ZMQ8 1374 aa13.22□□□□□ -0.29
CDC42EP3-203ENST00000453555 NINLQ9Y2I6 1382 aa13.22□□□□□ -0.29
CDC42EP3-203ENST00000453555 MYOM1P52179 1685 aa13.22□□□□□ -0.29
CDC42EP3-203ENST00000453555 C19orf67A6NJJ6 358 aa13.22□□□□□ -0.29
CDC42EP3-203ENST00000453555 AXIN2Q9Y2T1 843 aa13.22□□□□□ -0.29
CDC42EP3-203ENST00000453555 USP31Q70CQ4 1352 aa13.21□□□□□ -0.29
CDC42EP3-203ENST00000453555 FAM182BQ5T319 152 aa13.21□□□□□ -0.29
CDC42EP3-203ENST00000453555 ARHGEF25Q86VW2 580 aa13.21□□□□□ -0.29
CDC42EP3-203ENST00000453555 KIF20BQ96Q89 1820 aa13.2□□□□□ -0.3
CDC42EP3-203ENST00000453555 WNK3Q9BYP7 1800 aa13.2□□□□□ -0.3
CDC42EP3-203ENST00000453555 CRB1P82279 1406 aa13.2□□□□□ -0.3
CDC42EP3-203ENST00000453555 EP400Q96L91 3159 aa13.2□□□□□ -0.3
CDC42EP3-203ENST00000453555 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
CDC42EP3-203ENST00000453555 CDCA8Q53HL2 280 aa13.19□□□□□ -0.3
CDC42EP3-203ENST00000453555 CCDC125Q86Z20 511 aa13.19□□□□□ -0.3
CDC42EP3-203ENST00000453555 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
CDC42EP3-203ENST00000453555 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
CDC42EP3-203ENST00000453555 HSPA5P11021 654 aaKnown RBP13.18□□□□□ -0.3
CDC42EP3-203ENST00000453555 BARGINQ6ZT62 677 aa13.18□□□□□ -0.3
CDC42EP3-203ENST00000453555 TOM1L2Q6ZVM7 507 aa13.18□□□□□ -0.3
CDC42EP3-203ENST00000453555 OVOS2A0A0J9YW53 1432 aa13.18□□□□□ -0.3
CDC42EP3-203ENST00000453555 BLMP54132 1417 aaPredicted RBP13.18□□□□□ -0.3
CDC42EP3-203ENST00000453555 OVOS2Q6IE36 1432 aa13.18□□□□□ -0.3
CDC42EP3-203ENST00000453555 PARP4Q9UKK3 1724 aaKnown RBP13.18□□□□□ -0.3
CDC42EP3-203ENST00000453555 RGPD1P0DJD0 1748 aa13.17□□□□□ -0.3
CDC42EP3-203ENST00000453555 CSB-PGBD3P0DP91 1061 aa13.17□□□□□ -0.3
CDC42EP3-203ENST00000453555 EIF4G2P78344 907 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDC42EP3-203ENST00000453555 FARP1Q9Y4F1 1045 aaPredicted RBP13.17□□□□□ -0.3
CDC42EP3-203ENST00000453555 WDR17Q8IZU2 1322 aa13.16□□□□□ -0.3
CDC42EP3-203ENST00000453555 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
CDC42EP3-203ENST00000453555 COG3Q96JB2 828 aa13.16□□□□□ -0.3
CDC42EP3-203ENST00000453555 THRAP3Q9Y2W1 955 aaKnown RBP13.16□□□□□ -0.3
CDC42EP3-203ENST00000453555 ABCC6O95255 1503 aa13.15□□□□□ -0.3
CDC42EP3-203ENST00000453555 LRRC37A3O60309 1634 aa13.15□□□□□ -0.3
CDC42EP3-203ENST00000453555 PDE3BQ13370 1112 aa13.15□□□□□ -0.3
CDC42EP3-203ENST00000453555 DEFB132Q7Z7B7 95 aa13.15□□□□□ -0.3
CDC42EP3-203ENST00000453555 GGNBP2Q9H3C7 697 aa13.15□□□□□ -0.3
CDC42EP3-203ENST00000453555 TNS1Q9HBL0 1735 aaKnown RBP13.14□□□□□ -0.31
CDC42EP3-203ENST00000453555 FBLN1P23142 703 aa13.14□□□□□ -0.31
CDC42EP3-203ENST00000453555 CREBZFQ9NS37 354 aa13.14□□□□□ -0.31
CDC42EP3-203ENST00000453555 RGPD2P0DJD1 1756 aa13.14□□□□□ -0.31
CDC42EP3-203ENST00000453555 FYB1O15117 783 aa13.13□□□□□ -0.31
CDC42EP3-203ENST00000453555 SBF2Q86WG5 1849 aa13.12□□□□□ -0.31
CDC42EP3-203ENST00000453555 PROM2Q8N271 834 aa13.12□□□□□ -0.31
CDC42EP3-203ENST00000453555 CARD10Q9BWT7 1032 aa13.12□□□□□ -0.31
CDC42EP3-203ENST00000453555 CARD14Q9BXL6 1004 aa13.12□□□□□ -0.31
CDC42EP3-203ENST00000453555 NSD3Q9BZ95 1437 aa13.12□□□□□ -0.31
CDC42EP3-203ENST00000453555 TRIM37O94972 964 aa13.11□□□□□ -0.31
CDC42EP3-203ENST00000453555 DDB1Q16531 1140 aa13.11□□□□□ -0.31
CDC42EP3-203ENST00000453555 FAM196AQ6ZSG2 479 aa13.11□□□□□ -0.31
CDC42EP3-203ENST00000453555 ANKRD24Q8TF21 1146 aa13.11□□□□□ -0.31
CDC42EP3-203ENST00000453555 LTV1Q96GA3 475 aaPredicted RBP13.11□□□□□ -0.31
CDC42EP3-203ENST00000453555 NLRP2Q9NX02 1062 aa13.11□□□□□ -0.31
CDC42EP3-203ENST00000453555 ERBB3P21860 1342 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms