RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 BRD4O60885 1362 aaPredicted RBP31.69■■■□□ 2.66
TNFRSF25-208ENST00000453341 USP6P35125 1406 aa31.69■■■□□ 2.66
TNFRSF25-208ENST00000453341 MYOM1P52179 1685 aa31.69■■■□□ 2.66
TNFRSF25-208ENST00000453341 NLRP6P59044 892 aa31.68■■■□□ 2.66
TNFRSF25-208ENST00000453341 TOM1L2Q6ZVM7 507 aa31.68■■■□□ 2.66
TNFRSF25-208ENST00000453341 ZBTB7AO95365 584 aa31.67■■■□□ 2.66
TNFRSF25-208ENST00000453341 MARCH10Q8NA82 808 aaPredicted RBP31.67■■■□□ 2.66
TNFRSF25-208ENST00000453341 AXIN2Q9Y2T1 843 aa31.66■■■□□ 2.66
TNFRSF25-208ENST00000453341 PIK3C2AO00443 1686 aa31.65■■■□□ 2.66
TNFRSF25-208ENST00000453341 PTGER2P43116 358 aa31.65■■■□□ 2.66
TNFRSF25-208ENST00000453341 CENPJQ9HC77 1338 aaPredicted RBP31.65■■■□□ 2.66
TNFRSF25-208ENST00000453341 AKAP12Q02952 1782 aa31.65■■■□□ 2.66
TNFRSF25-208ENST00000453341 BCL9O00512 1426 aa31.65■■■□□ 2.66
TNFRSF25-208ENST00000453341 CABP1Q9NZU7 370 aa31.64■■■□□ 2.66
TNFRSF25-208ENST00000453341 WDR17Q8IZU2 1322 aa31.63■■■□□ 2.65
TNFRSF25-208ENST00000453341 QRICH2Q9H0J4 1663 aa31.62■■■□□ 2.65
TNFRSF25-208ENST00000453341 CPSF1Q10570 1443 aaKnown RBP31.6■■■□□ 2.65
TNFRSF25-208ENST00000453341 ATF5Q9Y2D1 282 aaPredicted RBP31.6■■■□□ 2.65
TNFRSF25-208ENST00000453341 RGPD5Q99666 1765 aa31.59■■■□□ 2.65
TNFRSF25-208ENST00000453341 ZNF784Q8NCA9 323 aaPredicted RBP31.58■■■□□ 2.65
TNFRSF25-208ENST00000453341 TXNRD1Q16881 649 aa31.57■■■□□ 2.64
TNFRSF25-208ENST00000453341 CDCA7Q9BWT1 371 aaPredicted RBP31.56■■■□□ 2.64
TNFRSF25-208ENST00000453341 ARHGEF25Q86VW2 580 aa31.55■■■□□ 2.64
TNFRSF25-208ENST00000453341 STK32BQ9NY57 414 aa31.55■■■□□ 2.64
TNFRSF25-208ENST00000453341 SLC15A2Q16348 729 aa31.53■■■□□ 2.64
TNFRSF25-208ENST00000453341 CARD10Q9BWT7 1032 aa31.53■■■□□ 2.64
TNFRSF25-208ENST00000453341 FHDC1Q9C0D6 1143 aaPredicted RBP31.53■■■□□ 2.64
TNFRSF25-208ENST00000453341 SYT17Q9BSW7 474 aa31.52■■■□□ 2.64
TNFRSF25-208ENST00000453341 SGIP1Q9BQI5 828 aa31.51■■■□□ 2.63
TNFRSF25-208ENST00000453341 SOX12O15370 315 aa31.48■■■□□ 2.63
TNFRSF25-208ENST00000453341 CSB-PGBD3P0DP91 1061 aa31.48■■■□□ 2.63
TNFRSF25-208ENST00000453341 CHD4Q14839 1912 aa31.47■■■□□ 2.63
TNFRSF25-208ENST00000453341 EXOC5O00471 708 aa31.47■■■□□ 2.63
TNFRSF25-208ENST00000453341 MTFR1LQ9H019 292 aa31.47■■■□□ 2.63
TNFRSF25-208ENST00000453341 TTC21BQ7Z4L5 1316 aa31.47■■■□□ 2.63
TNFRSF25-208ENST00000453341 TRPM1Q7Z4N2 1603 aa31.46■■■□□ 2.63
TNFRSF25-208ENST00000453341 NFAT5O94916 1531 aa31.46■■■□□ 2.63
TNFRSF25-208ENST00000453341 KCNH5Q8NCM2 988 aa31.46■■■□□ 2.63
TNFRSF25-208ENST00000453341 NHSQ6T4R5 1651 aa31.45■■■□□ 2.63
TNFRSF25-208ENST00000453341 TNS2Q63HR2 1409 aa31.45■■■□□ 2.63
TNFRSF25-208ENST00000453341 PAPPAQ13219 1627 aa31.42■■■□□ 2.62
TNFRSF25-208ENST00000453341 EVC2Q86UK5 1308 aa31.42■■■□□ 2.62
TNFRSF25-208ENST00000453341 CCDC7Q96M83 1385 aa31.42■■■□□ 2.62
TNFRSF25-208ENST00000453341 ACSBG1Q96GR2 724 aa31.39■■■□□ 2.62
TNFRSF25-208ENST00000453341 ZNF692Q9BU19 519 aaPredicted RBP31.39■■■□□ 2.62
TNFRSF25-208ENST00000453341 TTC21AQ8NDW8 1320 aa31.38■■■□□ 2.61
TNFRSF25-208ENST00000453341 ABCC6O95255 1503 aa31.38■■■□□ 2.61
TNFRSF25-208ENST00000453341 ARXQ96QS3 562 aa31.37■■■□□ 2.61
TNFRSF25-208ENST00000453341 GOLGB1Q14789 3259 aaKnown RBP31.35■■■□□ 2.61
TNFRSF25-208ENST00000453341 SENP3-EIF4A1A0A087X0R7 540 aa31.35■■■□□ 2.61
TNFRSF25-208ENST00000453341 BTAF1O14981 1849 aa31.35■■■□□ 2.61
TNFRSF25-208ENST00000453341 MAP3K5Q99683 1374 aa31.34■■■□□ 2.61
TNFRSF25-208ENST00000453341 C1QTNF8P60827 252 aa31.33■■■□□ 2.61
TNFRSF25-208ENST00000453341 ZNF827Q17R98 1081 aa31.33■■■□□ 2.61
TNFRSF25-208ENST00000453341 KAT6BQ8WYB5 2073 aa31.31■■■□□ 2.6
TNFRSF25-208ENST00000453341 KTN1Q86UP2 1357 aaKnown RBP31.3■■■□□ 2.6
TNFRSF25-208ENST00000453341 ERBB3P21860 1342 aa31.3■■■□□ 2.6
TNFRSF25-208ENST00000453341 MON2Q7Z3U7 1717 aa31.29■■■□□ 2.6
TNFRSF25-208ENST00000453341 LRRC4BQ9NT99 713 aa31.29■■■□□ 2.6
TNFRSF25-208ENST00000453341 L3MBTL2Q969R5 705 aa31.28■■■□□ 2.6
TNFRSF25-208ENST00000453341 NLRP2Q9NX02 1062 aa31.28■■■□□ 2.6
TNFRSF25-208ENST00000453341 USP54Q70EL1 1684 aa31.26■■■□□ 2.6
TNFRSF25-208ENST00000453341 IL2RBP14784 551 aa31.26■■■□□ 2.59
TNFRSF25-208ENST00000453341 USP31Q70CQ4 1352 aa31.25■■■□□ 2.59
TNFRSF25-208ENST00000453341 LTN1O94822 1766 aa31.25■■■□□ 2.59
TNFRSF25-208ENST00000453341 CEP350Q5VT06 3117 aa31.23■■■□□ 2.59
TNFRSF25-208ENST00000453341 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.23■■■□□ 2.59
TNFRSF25-208ENST00000453341 AKT1S1Q96B36 256 aa31.22■■■□□ 2.59
TNFRSF25-208ENST00000453341 GPR162Q16538 588 aa31.21■■■□□ 2.59
TNFRSF25-208ENST00000453341 COL24A1Q17RW2 1714 aa31.21■■■□□ 2.59
TNFRSF25-208ENST00000453341 QSER1Q2KHR3 1735 aa31.21■■■□□ 2.59
TNFRSF25-208ENST00000453341 ROCK2O75116 1388 aaKnown RBP31.2■■■□□ 2.59
TNFRSF25-208ENST00000453341 NME9Q86XW9 330 aa31.2■■■□□ 2.59
TNFRSF25-208ENST00000453341 ANKRD24Q8TF21 1146 aa31.19■■■□□ 2.58
TNFRSF25-208ENST00000453341 CD163L1Q9NR16 1453 aa31.19■■■□□ 2.58
TNFRSF25-208ENST00000453341 SBNO2Q9Y2G9 1366 aa31.17■■■□□ 2.58
TNFRSF25-208ENST00000453341 TUBGCP6Q96RT7 1819 aa31.17■■■□□ 2.58
TNFRSF25-208ENST00000453341 KLHL34Q8N239 644 aa31.16■■■□□ 2.58
TNFRSF25-208ENST00000453341 PNPLA7Q6ZV29 1317 aa31.16■■■□□ 2.58
TNFRSF25-208ENST00000453341 SLC16A10Q8TF71 515 aa31.15■■■□□ 2.58
TNFRSF25-208ENST00000453341 SLC27A3Q5K4L6 730 aa31.12■■■□□ 2.57
TNFRSF25-208ENST00000453341 GIGYF1O75420 1035 aaPredicted RBP31.11■■■□□ 2.57
TNFRSF25-208ENST00000453341 POLD1P28340 1107 aa31.11■■■□□ 2.57
TNFRSF25-208ENST00000453341 KCNQ4P56696 695 aa31.11■■■□□ 2.57
TNFRSF25-208ENST00000453341 PELP1Q8IZL8 1130 aaKnown RBP31.11■■■□□ 2.57
TNFRSF25-208ENST00000453341 NLGN2Q8NFZ4 835 aa31.11■■■□□ 2.57
TNFRSF25-208ENST00000453341 SHANK3Q9BYB0 1731 aa31.11■■■□□ 2.57
TNFRSF25-208ENST00000453341 SIN3AQ96ST3 1273 aa31.1■■■□□ 2.57
TNFRSF25-208ENST00000453341 DDX54Q8TDD1 881 aaKnown RBP31.09■■■□□ 2.57
TNFRSF25-208ENST00000453341 TFCP2L1Q9NZI6 479 aa31.06■■■□□ 2.56
TNFRSF25-208ENST00000453341 LY75O60449 1722 aa31.05■■■□□ 2.56
TNFRSF25-208ENST00000453341 DOT1LQ8TEK3 1739 aa31.05■■■□□ 2.56
TNFRSF25-208ENST00000453341 TMC1Q8TDI8 760 aa31.04■■■□□ 2.56
TNFRSF25-208ENST00000453341 SLC12A5Q9H2X9 1139 aa31.04■■■□□ 2.56
TNFRSF25-208ENST00000453341 EDC4Q6P2E9 1401 aaKnown RBP31.04■■■□□ 2.56
TNFRSF25-208ENST00000453341 NSD2O96028 1365 aa31.04■■■□□ 2.56
TNFRSF25-208ENST00000453341 FAM208AQ9UK61 1670 aaKnown RBP31.03■■■□□ 2.56
TNFRSF25-208ENST00000453341 PRIM1P49642 420 aaKnown RBP31.02■■■□□ 2.56
TNFRSF25-208ENST00000453341 IP6K1Q92551 441 aa31.02■■■□□ 2.56
TNFRSF25-208ENST00000453341 SYTL4Q96C24 671 aaPredicted RBP31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms