RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
HLA-DPA1-244ENST00000453337 PEAK1Q9H792 1746 aa16.65■□□□□ 0.26
HLA-DPA1-244ENST00000453337 PHRF1Q9P1Y6 1649 aaKnown RBP16.64■□□□□ 0.25
HLA-DPA1-244ENST00000453337 CRYBG1Q9Y4K1 1723 aa16.63■□□□□ 0.25
HLA-DPA1-244ENST00000453337 ZBTB7CA1YPR0 619 aa16.63■□□□□ 0.25
HLA-DPA1-244ENST00000453337 FCHSD2O94868 740 aa16.63■□□□□ 0.25
HLA-DPA1-244ENST00000453337 EIF4A2Q14240 407 aaKnown RBP16.63■□□□□ 0.25
HLA-DPA1-244ENST00000453337 CPDO75976 1380 aa16.62■□□□□ 0.25
HLA-DPA1-244ENST00000453337 COL16A1Q07092 1604 aaPredicted RBP16.61■□□□□ 0.25
HLA-DPA1-244ENST00000453337 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
HLA-DPA1-244ENST00000453337 RUNDC1Q96C34 613 aa16.61■□□□□ 0.25
HLA-DPA1-244ENST00000453337 BLMP54132 1417 aaPredicted RBP16.61■□□□□ 0.25
HLA-DPA1-244ENST00000453337 NEFMP07197 916 aa16.6■□□□□ 0.25
HLA-DPA1-244ENST00000453337 COL22A1Q8NFW1 1626 aaPredicted RBP16.59■□□□□ 0.25
HLA-DPA1-244ENST00000453337 RGPD5Q99666 1765 aa16.59■□□□□ 0.25
HLA-DPA1-244ENST00000453337 LTV1Q96GA3 475 aaPredicted RBP16.58■□□□□ 0.24
HLA-DPA1-244ENST00000453337 PRDM11Q9NQV5 511 aa16.58■□□□□ 0.24
HLA-DPA1-244ENST00000453337 KIAA0232Q92628 1395 aa16.58■□□□□ 0.24
HLA-DPA1-244ENST00000453337 COL18A1P39060 1754 aa16.57■□□□□ 0.24
HLA-DPA1-244ENST00000453337 ABCA3Q99758 1704 aa16.57■□□□□ 0.24
HLA-DPA1-244ENST00000453337 ABCC6O95255 1503 aa16.57■□□□□ 0.24
HLA-DPA1-244ENST00000453337 CENPBP07199 599 aaPredicted RBP16.57■□□□□ 0.24
HLA-DPA1-244ENST00000453337 CCDC146Q8IYE0 955 aa16.57■□□□□ 0.24
HLA-DPA1-244ENST00000453337 HMOX1P09601 288 aa16.56■□□□□ 0.24
HLA-DPA1-244ENST00000453337 CHRNA2Q15822 529 aa16.56■□□□□ 0.24
HLA-DPA1-244ENST00000453337 SULT6B1Q6IMI4 303 aa16.56■□□□□ 0.24
HLA-DPA1-244ENST00000453337 EYA1Q99502 592 aa16.56■□□□□ 0.24
HLA-DPA1-244ENST00000453337 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
HLA-DPA1-244ENST00000453337 ZBED9Q6R2W3 1325 aa16.55■□□□□ 0.24
HLA-DPA1-244ENST00000453337 MAPK8IP3Q9UPT6 1336 aa16.55■□□□□ 0.24
HLA-DPA1-244ENST00000453337 APAF1O14727 1248 aa16.55■□□□□ 0.24
HLA-DPA1-244ENST00000453337 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
HLA-DPA1-244ENST00000453337 ANKRD24Q8TF21 1146 aa16.55■□□□□ 0.24
HLA-DPA1-244ENST00000453337 PLEKHF1Q96S99 279 aa16.55■□□□□ 0.24
HLA-DPA1-244ENST00000453337 RSPH6AQ9H0K4 717 aa16.55■□□□□ 0.24
HLA-DPA1-244ENST00000453337 JCADQ9P266 1359 aa16.54■□□□□ 0.24
HLA-DPA1-244ENST00000453337 RGPD1P0DJD0 1748 aa16.54■□□□□ 0.24
HLA-DPA1-244ENST00000453337 IGSF1Q8N6C5 1336 aa16.54■□□□□ 0.24
HLA-DPA1-244ENST00000453337 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
HLA-DPA1-244ENST00000453337 TCP11L2Q8N4U5 519 aa16.54■□□□□ 0.24
HLA-DPA1-244ENST00000453337 FAM83GA6ND36 823 aa16.53■□□□□ 0.24
HLA-DPA1-244ENST00000453337 ERBB3P21860 1342 aa16.51■□□□□ 0.23
HLA-DPA1-244ENST00000453337 CSB-PGBD3P0DP91 1061 aa16.51■□□□□ 0.23
HLA-DPA1-244ENST00000453337 EVA1CP58658 441 aa16.51■□□□□ 0.23
HLA-DPA1-244ENST00000453337 NBPF6Q5VWK0 638 aa16.51■□□□□ 0.23
HLA-DPA1-244ENST00000453337 NBPF4Q96M43 638 aa16.51■□□□□ 0.23
HLA-DPA1-244ENST00000453337 SALL2Q9Y467 1007 aaPredicted RBP16.51■□□□□ 0.23
HLA-DPA1-244ENST00000453337 RGPD2P0DJD1 1756 aa16.51■□□□□ 0.23
HLA-DPA1-244ENST00000453337 KDRP35968 1356 aa16.51■□□□□ 0.23
HLA-DPA1-244ENST00000453337 NUTM2BA6NNL0 878 aaPredicted RBP16.5■□□□□ 0.23
HLA-DPA1-244ENST00000453337 NUTM2EB1AL46 878 aaPredicted RBP16.5■□□□□ 0.23
HLA-DPA1-244ENST00000453337 HSPA1LP34931 641 aa16.5■□□□□ 0.23
HLA-DPA1-244ENST00000453337 TMPOP42166 694 aaKnown RBP16.5■□□□□ 0.23
HLA-DPA1-244ENST00000453337 NUTM2AQ8IVF1 878 aaPredicted RBP16.5■□□□□ 0.23
HLA-DPA1-244ENST00000453337 FAM208AQ9UK61 1670 aaKnown RBP16.5■□□□□ 0.23
HLA-DPA1-244ENST00000453337 SPATA31A6Q5VVP1 1343 aa16.49■□□□□ 0.23
HLA-DPA1-244ENST00000453337 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
HLA-DPA1-244ENST00000453337 PDE3BQ13370 1112 aa16.49■□□□□ 0.23
HLA-DPA1-244ENST00000453337 AEBP1Q8IUX7 1158 aa16.49■□□□□ 0.23
HLA-DPA1-244ENST00000453337 NLRP2Q9NX02 1062 aa16.49■□□□□ 0.23
HLA-DPA1-244ENST00000453337 CCDC27Q2M243 656 aa16.48■□□□□ 0.23
HLA-DPA1-244ENST00000453337 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
HLA-DPA1-244ENST00000453337 LMO7Q8WWI1 1683 aa16.48■□□□□ 0.23
HLA-DPA1-244ENST00000453337 CAMTA1Q9Y6Y1 1673 aa16.48■□□□□ 0.23
HLA-DPA1-244ENST00000453337 SENP3-EIF4A1A0A087X0R7 540 aa16.47■□□□□ 0.23
HLA-DPA1-244ENST00000453337 ADAMTS2O95450 1211 aa16.47■□□□□ 0.23
HLA-DPA1-244ENST00000453337 RIPK4P57078 832 aa16.47■□□□□ 0.23
HLA-DPA1-244ENST00000453337 NEUROD2Q15784 382 aa16.47■□□□□ 0.23
HLA-DPA1-244ENST00000453337 NFE2L2Q16236 605 aa16.47■□□□□ 0.23
HLA-DPA1-244ENST00000453337 WDR17Q8IZU2 1322 aa16.46■□□□□ 0.23
HLA-DPA1-244ENST00000453337 BTG4Q9NY30 223 aa16.46■□□□□ 0.23
HLA-DPA1-244ENST00000453337 TOM1L2Q6ZVM7 507 aa16.45■□□□□ 0.22
HLA-DPA1-244ENST00000453337 USHBP1Q8N6Y0 703 aa16.45■□□□□ 0.22
HLA-DPA1-244ENST00000453337 RRP7AQ9Y3A4 280 aaKnown RBP16.45■□□□□ 0.22
HLA-DPA1-244ENST00000453337 NCAPD2Q15021 1401 aa16.45■□□□□ 0.22
HLA-DPA1-244ENST00000453337 COL5A2P05997 1499 aaPredicted RBP16.44■□□□□ 0.22
HLA-DPA1-244ENST00000453337 LMOD3Q0VAK6 560 aa16.44■□□□□ 0.22
HLA-DPA1-244ENST00000453337 PLEKHO1Q53GL0 409 aaPredicted RBP16.44■□□□□ 0.22
HLA-DPA1-244ENST00000453337 WDR63Q8IWG1 891 aa16.44■□□□□ 0.22
HLA-DPA1-244ENST00000453337 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
HLA-DPA1-244ENST00000453337 GAS2L2Q8NHY3 880 aa16.44■□□□□ 0.22
HLA-DPA1-244ENST00000453337 CARD10Q9BWT7 1032 aa16.44■□□□□ 0.22
HLA-DPA1-244ENST00000453337 STRN4Q9NRL3 753 aa16.44■□□□□ 0.22
HLA-DPA1-244ENST00000453337 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
HLA-DPA1-244ENST00000453337 GOLGA2Q08379 1002 aa16.43■□□□□ 0.22
HLA-DPA1-244ENST00000453337 AMOTQ4VCS5 1084 aa16.43■□□□□ 0.22
HLA-DPA1-244ENST00000453337 RAPGEF4Q8WZA2 1011 aa16.43■□□□□ 0.22
HLA-DPA1-244ENST00000453337 ZNF521Q96K83 1311 aa16.43■□□□□ 0.22
HLA-DPA1-244ENST00000453337 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
HLA-DPA1-244ENST00000453337 MTHFSDQ2M296 383 aaKnown RBP16.41■□□□□ 0.22
HLA-DPA1-244ENST00000453337 LARP1Q6PKG0 1096 aaKnown RBP16.41■□□□□ 0.22
HLA-DPA1-244ENST00000453337 NGLY1Q96IV0 654 aa16.41■□□□□ 0.22
HLA-DPA1-244ENST00000453337 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
HLA-DPA1-244ENST00000453337 NWD2Q9ULI1 1742 aa16.4■□□□□ 0.22
HLA-DPA1-244ENST00000453337 HTATSF1O43719 755 aaKnown RBP16.4■□□□□ 0.22
HLA-DPA1-244ENST00000453337 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
HLA-DPA1-244ENST00000453337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.4■□□□□ 0.22
HLA-DPA1-244ENST00000453337 PLEKHG2Q9H7P9 1386 aa16.39■□□□□ 0.21
HLA-DPA1-244ENST00000453337 CRB1P82279 1406 aa16.39■□□□□ 0.21
HLA-DPA1-244ENST00000453337 PLCH1Q4KWH8 1693 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms