RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 SPATA31A1Q5TZJ5 1347 aa21.4■■□□□ 1.02
VPS8-213ENST00000453056 FAM98CQ17RN3 349 aaKnown RBP21.4■■□□□ 1.02
VPS8-213ENST00000453056 CGNL1Q0VF96 1302 aa21.39■■□□□ 1.01
VPS8-213ENST00000453056 LARP1Q6PKG0 1096 aaKnown RBP21.39■■□□□ 1.01
VPS8-213ENST00000453056 SEPT12Q8IYM1 358 aa21.39■■□□□ 1.01
VPS8-213ENST00000453056 CRB1P82279 1406 aa21.38■■□□□ 1.01
VPS8-213ENST00000453056 THSD7AQ9UPZ6 1657 aa21.38■■□□□ 1.01
VPS8-213ENST00000453056 FYB1O15117 783 aa21.38■■□□□ 1.01
VPS8-213ENST00000453056 ONECUT3O60422 494 aaPredicted RBP21.37■■□□□ 1.01
VPS8-213ENST00000453056 CARD14Q9BXL6 1004 aa21.37■■□□□ 1.01
VPS8-213ENST00000453056 GGNBP2Q9H3C7 697 aa21.37■■□□□ 1.01
VPS8-213ENST00000453056 KIF7Q2M1P5 1343 aa21.36■■□□□ 1.01
VPS8-213ENST00000453056 WDR17Q8IZU2 1322 aa21.36■■□□□ 1.01
VPS8-213ENST00000453056 CSB-PGBD3P0DP91 1061 aa21.36■■□□□ 1.01
VPS8-213ENST00000453056 TCP11L2Q8N4U5 519 aa21.36■■□□□ 1.01
VPS8-213ENST00000453056 USP35Q9P2H5 1018 aa21.36■■□□□ 1.01
VPS8-213ENST00000453056 THRAP3Q9Y2W1 955 aaKnown RBP21.35■■□□□ 1.01
VPS8-213ENST00000453056 ANKRD26Q9UPS8 1709 aa21.35■■□□□ 1.01
VPS8-213ENST00000453056 C11orf95C9JLR9 678 aaPredicted RBP21.34■■□□□ 1.01
VPS8-213ENST00000453056 TOM1L2Q6ZVM7 507 aa21.34■■□□□ 1.01
VPS8-213ENST00000453056 PANK3Q9H999 370 aa21.34■■□□□ 1.01
VPS8-213ENST00000453056 AXIN2Q9Y2T1 843 aa21.34■■□□□ 1.01
VPS8-213ENST00000453056 BLMP54132 1417 aaPredicted RBP21.34■■□□□ 1.01
VPS8-213ENST00000453056 EP400Q96L91 3159 aa21.33■■□□□ 1.01
VPS8-213ENST00000453056 BARGINQ6ZT62 677 aa21.33■■□□□ 1.01
VPS8-213ENST00000453056 RTL1A6NKG5 1358 aa21.33■■□□□ 1
VPS8-213ENST00000453056 WNK3Q9BYP7 1800 aa21.32■■□□□ 1
VPS8-213ENST00000453056 FAM208AQ9UK61 1670 aaKnown RBP21.32■■□□□ 1
VPS8-213ENST00000453056 KRT27Q7Z3Y8 459 aa21.32■■□□□ 1
VPS8-213ENST00000453056 AMPHP49418 695 aa21.31■■□□□ 1
VPS8-213ENST00000453056 UPF1Q92900 1129 aaKnown RBP eCLIP21.31■■□□□ 1
VPS8-213ENST00000453056 NSD2O96028 1365 aa21.31■■□□□ 1
VPS8-213ENST00000453056 ERBB3P21860 1342 aa21.3■■□□□ 1
VPS8-213ENST00000453056 MAP3K19Q56UN5 1328 aa21.3■■□□□ 1
VPS8-213ENST00000453056 PARP4Q9UKK3 1724 aaKnown RBP21.29■■□□□ 1
VPS8-213ENST00000453056 CCDC7Q96M83 1385 aa21.29■■□□□ 1
VPS8-213ENST00000453056 IP6K1Q92551 441 aa21.29■■□□□ 1
VPS8-213ENST00000453056 CARD10Q9BWT7 1032 aa21.28■■□□□ 1
VPS8-213ENST00000453056 ANKRD24Q8TF21 1146 aa21.27■■□□□ 1
VPS8-213ENST00000453056 KNSTRNQ9Y448 316 aa21.27■■□□□ 1
VPS8-213ENST00000453056 KIF24Q5T7B8 1368 aa21.26■□□□□ 0.99
VPS8-213ENST00000453056 HOXC9P31274 260 aa21.26■□□□□ 0.99
VPS8-213ENST00000453056 RRS1Q15050 365 aaKnown RBP21.26■□□□□ 0.99
VPS8-213ENST00000453056 CDCA7Q9BWT1 371 aaPredicted RBP21.26■□□□□ 0.99
VPS8-213ENST00000453056 SMG6Q86US8 1419 aaKnown RBP21.26■□□□□ 0.99
VPS8-213ENST00000453056 MAP2P11137 1827 aaKnown RBP21.25■□□□□ 0.99
VPS8-213ENST00000453056 NLRP2Q9NX02 1062 aa21.25■□□□□ 0.99
VPS8-213ENST00000453056 FLT4P35916 1363 aa21.24■□□□□ 0.99
VPS8-213ENST00000453056 PDE3BQ13370 1112 aa21.24■□□□□ 0.99
VPS8-213ENST00000453056 LRRC37A3O60309 1634 aa21.24■□□□□ 0.99
VPS8-213ENST00000453056 WASHC2AQ641Q2 1341 aa21.24■□□□□ 0.99
VPS8-213ENST00000453056 FBLN1P23142 703 aa21.23■□□□□ 0.99
VPS8-213ENST00000453056 PEAK1Q9H792 1746 aa21.22■□□□□ 0.99
VPS8-213ENST00000453056 CCDC125Q86Z20 511 aa21.22■□□□□ 0.99
VPS8-213ENST00000453056 LTV1Q96GA3 475 aaPredicted RBP21.22■□□□□ 0.99
VPS8-213ENST00000453056 DISP2A7MBM2 1401 aa21.21■□□□□ 0.99
VPS8-213ENST00000453056 INSRP06213 1382 aa21.2■□□□□ 0.98
VPS8-213ENST00000453056 RGPD1P0DJD0 1748 aa21.19■□□□□ 0.98
VPS8-213ENST00000453056 ZEB1P37275 1124 aaPredicted RBP21.19■□□□□ 0.98
VPS8-213ENST00000453056 SF3B2Q13435 895 aaKnown RBP21.19■□□□□ 0.98
VPS8-213ENST00000453056 DDB1Q16531 1140 aa21.19■□□□□ 0.98
VPS8-213ENST00000453056 MORC1Q86VD1 984 aa21.18■□□□□ 0.98
VPS8-213ENST00000453056 RGPD2P0DJD1 1756 aa21.18■□□□□ 0.98
VPS8-213ENST00000453056 PPM1GO15355 546 aaPredicted RBP21.17■□□□□ 0.98
VPS8-213ENST00000453056 TNNT2P45379 298 aaPredicted RBP21.17■□□□□ 0.98
VPS8-213ENST00000453056 FAM196AQ6ZSG2 479 aa21.17■□□□□ 0.98
VPS8-213ENST00000453056 EMILIN1Q9Y6C2 1016 aa21.17■□□□□ 0.98
VPS8-213ENST00000453056 TNS2Q63HR2 1409 aa21.17■□□□□ 0.98
VPS8-213ENST00000453056 OVOS2A0A0G2JMS6 1433 aa21.16■□□□□ 0.98
VPS8-213ENST00000453056 IL2RBP14784 551 aa21.15■□□□□ 0.98
VPS8-213ENST00000453056 AMER1Q5JTC6 1135 aaPredicted RBP21.15■□□□□ 0.98
VPS8-213ENST00000453056 HSP90AB2PQ58FF8 381 aa21.14■□□□□ 0.97
VPS8-213ENST00000453056 FAM182BQ5T319 152 aa21.14■□□□□ 0.97
VPS8-213ENST00000453056 POLKQ9UBT6 870 aa21.13■□□□□ 0.97
VPS8-213ENST00000453056 NPC1L1Q9UHC9 1359 aa21.12■□□□□ 0.97
VPS8-213ENST00000453056 EXOC5O00471 708 aa21.12■□□□□ 0.97
VPS8-213ENST00000453056 KAT6BQ8WYB5 2073 aa21.12■□□□□ 0.97
VPS8-213ENST00000453056 TNS1Q9HBL0 1735 aaKnown RBP21.12■□□□□ 0.97
VPS8-213ENST00000453056 PER1O15534 1290 aaPredicted RBP21.1■□□□□ 0.97
VPS8-213ENST00000453056 SBF2Q86WG5 1849 aa21.09■□□□□ 0.97
VPS8-213ENST00000453056 BAG6P46379 1132 aa21.09■□□□□ 0.97
VPS8-213ENST00000453056 CC2D1BQ5T0F9 858 aaKnown RBP21.08■□□□□ 0.97
VPS8-213ENST00000453056 NBPF6Q5VWK0 638 aa21.08■□□□□ 0.97
VPS8-213ENST00000453056 NBPF4Q96M43 638 aa21.08■□□□□ 0.97
VPS8-213ENST00000453056 BCL9O00512 1426 aa21.07■□□□□ 0.96
VPS8-213ENST00000453056 TRIM37O94972 964 aa21.07■□□□□ 0.96
VPS8-213ENST00000453056 RAPGEF4Q8WZA2 1011 aa21.07■□□□□ 0.96
VPS8-213ENST00000453056 MEGF6O75095 1541 aa21.06■□□□□ 0.96
VPS8-213ENST00000453056 USHBP1Q8N6Y0 703 aa21.06■□□□□ 0.96
VPS8-213ENST00000453056 MARCH10Q8NA82 808 aaPredicted RBP21.06■□□□□ 0.96
VPS8-213ENST00000453056 NCAPD2Q15021 1401 aa21.04■□□□□ 0.96
VPS8-213ENST00000453056 TATP17735 454 aaPredicted RBP21.03■□□□□ 0.96
VPS8-213ENST00000453056 DEFB132Q7Z7B7 95 aa21.03■□□□□ 0.96
VPS8-213ENST00000453056 EIF4A2Q14240 407 aaKnown RBP21.02■□□□□ 0.96
VPS8-213ENST00000453056 SHANK3Q9BYB0 1731 aa21.01■□□□□ 0.95
VPS8-213ENST00000453056 CNGB1Q14028 1251 aaPredicted RBP21.01■□□□□ 0.95
VPS8-213ENST00000453056 ZCRB1Q8TBF4 217 aaKnown RBP21.01■□□□□ 0.95
VPS8-213ENST00000453056 PARD3Q8TEW0 1356 aa21■□□□□ 0.95
VPS8-213ENST00000453056 NHSQ6T4R5 1651 aa21■□□□□ 0.95
VPS8-213ENST00000453056 EYA1Q99502 592 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms