RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 C1orf115Q9H7X2 142 aa10.72□□□□□ -0.69
SCN3A-205ENST00000453007 MAP4K5Q9Y4K4 846 aa10.72□□□□□ -0.69
SCN3A-205ENST00000453007 ZIC2O95409 532 aaPredicted RBP10.71□□□□□ -0.69
SCN3A-205ENST00000453007 SNRPBP14678 240 aaKnown RBP10.71□□□□□ -0.69
SCN3A-205ENST00000453007 FLIIQ13045 1269 aa10.71□□□□□ -0.69
SCN3A-205ENST00000453007 TRIM46Q7Z4K8 759 aa10.71□□□□□ -0.69
SCN3A-205ENST00000453007 ARID3AQ99856 593 aa10.71□□□□□ -0.69
SCN3A-205ENST00000453007 ITPKCQ96DU7 683 aa10.69□□□□□ -0.7
SCN3A-205ENST00000453007 ZFAND3Q9H8U3 227 aa10.69□□□□□ -0.7
SCN3A-205ENST00000453007 GPSM3Q9Y4H4 160 aa10.69□□□□□ -0.7
SCN3A-205ENST00000453007 SCARF1Q14162 830 aa10.68□□□□□ -0.7
SCN3A-205ENST00000453007 CCDC116Q8IYX3 515 aa10.68□□□□□ -0.7
SCN3A-205ENST00000453007 ADAM32Q8TC27 787 aa10.68□□□□□ -0.7
SCN3A-205ENST00000453007 KLF16Q9BXK1 252 aaPredicted RBP10.68□□□□□ -0.7
SCN3A-205ENST00000453007 ARID3CA6NKF2 412 aa10.67□□□□□ -0.7
SCN3A-205ENST00000453007 MRPL14Q6P1L8 145 aaKnown RBP10.67□□□□□ -0.7
SCN3A-205ENST00000453007 TRIM34Q9BYJ4 488 aa10.67□□□□□ -0.7
SCN3A-205ENST00000453007 CDV3Q9UKY7 258 aaKnown RBP10.67□□□□□ -0.7
SCN3A-205ENST00000453007 ZFP42Q96MM3 310 aa10.66□□□□□ -0.7
SCN3A-205ENST00000453007 PURBQ96QR8 312 aaKnown RBP10.66□□□□□ -0.7
SCN3A-205ENST00000453007 KCTD15Q96SI1 283 aaPredicted RBP10.66□□□□□ -0.7
SCN3A-205ENST00000453007 OCSTAMPQ9BR26 566 aa10.65□□□□□ -0.7
SCN3A-205ENST00000453007 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
SCN3A-205ENST00000453007 ZCCHC6Q5VYS8 1495 aaKnown RBP10.65□□□□□ -0.7
SCN3A-205ENST00000453007 DZIP3Q86Y13 1208 aaKnown RBP10.64□□□□□ -0.71
SCN3A-205ENST00000453007 RB1CC1Q8TDY2 1594 aa10.64□□□□□ -0.71
SCN3A-205ENST00000453007 APBB1O00213 710 aa10.63□□□□□ -0.71
SCN3A-205ENST00000453007 UPP2O95045 317 aa10.63□□□□□ -0.71
SCN3A-205ENST00000453007 BANK1Q8NDB2 785 aa10.63□□□□□ -0.71
SCN3A-205ENST00000453007 PGPEP1Q9NXJ5 209 aa10.63□□□□□ -0.71
SCN3A-205ENST00000453007 NACADO15069 1562 aa10.63□□□□□ -0.71
SCN3A-205ENST00000453007 NBPF20Q3BBV1 942 aa10.62□□□□□ -0.71
SCN3A-205ENST00000453007 C6orf118Q5T5N4 469 aa10.62□□□□□ -0.71
SCN3A-205ENST00000453007 GJD4Q96KN9 370 aaPredicted RBP10.62□□□□□ -0.71
SCN3A-205ENST00000453007 PODXL2Q9NZ53 605 aa10.62□□□□□ -0.71
SCN3A-205ENST00000453007 RAB15P59190 212 aa10.61□□□□□ -0.71
SCN3A-205ENST00000453007 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
SCN3A-205ENST00000453007 PPP1R26Q5T8A7 1209 aaPredicted RBP10.61□□□□□ -0.71
SCN3A-205ENST00000453007 CLUAP1Q96AJ1 413 aa10.6□□□□□ -0.71
SCN3A-205ENST00000453007 ZBBXA8MT70 800 aa10.59□□□□□ -0.71
SCN3A-205ENST00000453007 BMP2P12643 396 aa10.59□□□□□ -0.71
SCN3A-205ENST00000453007 INTS6LQ5JSJ4 861 aaKnown RBP10.59□□□□□ -0.71
SCN3A-205ENST00000453007 TREML4Q6UXN2 200 aa10.59□□□□□ -0.71
SCN3A-205ENST00000453007 LINC00528Q8N1L1 170 aa10.59□□□□□ -0.71
SCN3A-205ENST00000453007 MEIOBQ8N635 442 aa10.59□□□□□ -0.71
SCN3A-205ENST00000453007 SNRKQ9NRH2 765 aa10.59□□□□□ -0.71
SCN3A-205ENST00000453007 MTMR14Q8NCE2 650 aa10.58□□□□□ -0.72
SCN3A-205ENST00000453007 NDUFB9Q9Y6M9 179 aa10.58□□□□□ -0.72
SCN3A-205ENST00000453007 A6NJR5 290 aa10.57□□□□□ -0.72
SCN3A-205ENST00000453007 WFS1O76024 890 aa10.57□□□□□ -0.72
SCN3A-205ENST00000453007 PCDHB9Q9Y5E1 797 aa10.57□□□□□ -0.72
SCN3A-205ENST00000453007 CBLBQ13191 982 aa10.56□□□□□ -0.72
SCN3A-205ENST00000453007 MCM6Q14566 821 aa10.56□□□□□ -0.72
SCN3A-205ENST00000453007 TSEN34Q9BSV6 310 aaKnown RBP10.56□□□□□ -0.72
SCN3A-205ENST00000453007 TERTO14746 1132 aaKnown RBP10.55□□□□□ -0.72
SCN3A-205ENST00000453007 TRAK2O60296 914 aa10.55□□□□□ -0.72
SCN3A-205ENST00000453007 FBXO45P0C2W1 286 aa10.55□□□□□ -0.72
SCN3A-205ENST00000453007 TRIM26Q12899 539 aaPredicted RBP10.55□□□□□ -0.72
SCN3A-205ENST00000453007 SOBPA7XYQ1 873 aa10.54□□□□□ -0.72
SCN3A-205ENST00000453007 MAN1A2O60476 641 aa10.54□□□□□ -0.72
SCN3A-205ENST00000453007 SOCS7O14512 581 aa10.53□□□□□ -0.72
SCN3A-205ENST00000453007 NFX1Q12986 1120 aaKnown RBP10.53□□□□□ -0.72
SCN3A-205ENST00000453007 TMPRSS4Q9NRS4 437 aa10.53□□□□□ -0.72
SCN3A-205ENST00000453007 NXF1Q9UBU9 619 aaKnown RBP10.53□□□□□ -0.72
SCN3A-205ENST00000453007 NR1H3Q13133 447 aa10.52□□□□□ -0.73
SCN3A-205ENST00000453007 SLC16A10Q8TF71 515 aa10.52□□□□□ -0.73
SCN3A-205ENST00000453007 PRM3Q9NNZ6 103 aa10.52□□□□□ -0.73
SCN3A-205ENST00000453007 ZNF330Q9Y3S2 320 aaPredicted RBP10.52□□□□□ -0.73
SCN3A-205ENST00000453007 MYO15BQ96JP2 1530 aa10.52□□□□□ -0.73
SCN3A-205ENST00000453007 Q6ZVU0 165 aa10.51□□□□□ -0.73
SCN3A-205ENST00000453007 ERVH48-1M5A8F1 160 aa10.5□□□□□ -0.73
SCN3A-205ENST00000453007 CCDC82Q8N4S0 544 aa10.5□□□□□ -0.73
SCN3A-205ENST00000453007 ZNF784Q8NCA9 323 aaPredicted RBP10.5□□□□□ -0.73
SCN3A-205ENST00000453007 BICRAQ9NZM4 1560 aa10.49□□□□□ -0.73
SCN3A-205ENST00000453007 ESPNB1AK53 854 aa10.49□□□□□ -0.73
SCN3A-205ENST00000453007 VEGFBP49765 207 aa10.49□□□□□ -0.73
SCN3A-205ENST00000453007 SEPT12Q8IYM1 358 aa10.49□□□□□ -0.73
SCN3A-205ENST00000453007 AGBL1Q96MI9 1066 aa10.49□□□□□ -0.73
SCN3A-205ENST00000453007 RAD21O60216 631 aa10.48□□□□□ -0.73
SCN3A-205ENST00000453007 GIGYF1O75420 1035 aaPredicted RBP10.48□□□□□ -0.73
SCN3A-205ENST00000453007 RELBQ01201 579 aa10.48□□□□□ -0.73
SCN3A-205ENST00000453007 LCE2AQ5TA79 106 aaPredicted RBP10.48□□□□□ -0.73
SCN3A-205ENST00000453007 ZNF592Q92610 1267 aa10.48□□□□□ -0.73
SCN3A-205ENST00000453007 TBC1D2BQ9UPU7 963 aa10.48□□□□□ -0.73
SCN3A-205ENST00000453007 TTLL8A6PVC2 850 aa10.47□□□□□ -0.73
SCN3A-205ENST00000453007 TRIM52Q96A61 297 aa10.47□□□□□ -0.73
SCN3A-205ENST00000453007 SOS2Q07890 1332 aaPredicted RBP10.47□□□□□ -0.73
SCN3A-205ENST00000453007 DCAF1Q9Y4B6 1507 aa10.47□□□□□ -0.73
SCN3A-205ENST00000453007 FIGNL2A6NMB9 653 aa10.46□□□□□ -0.73
SCN3A-205ENST00000453007 GPR37L1O60883 481 aa10.46□□□□□ -0.73
SCN3A-205ENST00000453007 MCCD1P59942 119 aaPredicted RBP10.46□□□□□ -0.73
SCN3A-205ENST00000453007 POM121Q96HA1 1249 aa10.46□□□□□ -0.73
SCN3A-205ENST00000453007 CYLDQ9NQC7 956 aa10.46□□□□□ -0.73
SCN3A-205ENST00000453007 DNMT3LQ9UJW3 386 aa10.46□□□□□ -0.73
SCN3A-205ENST00000453007 SPINT1O43278 529 aa10.45□□□□□ -0.74
SCN3A-205ENST00000453007 RNF20Q5VTR2 975 aa10.45□□□□□ -0.74
SCN3A-205ENST00000453007 PROSER2Q86WR7 435 aaPredicted RBP10.45□□□□□ -0.74
SCN3A-205ENST00000453007 NPAS3Q8IXF0 933 aa10.45□□□□□ -0.74
SCN3A-205ENST00000453007 ZNF395Q9H8N7 513 aaPredicted RBP10.45□□□□□ -0.74
SCN3A-205ENST00000453007 ADH1AP07327 375 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms