RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 MORC1Q86VD1 984 aa12.13□□□□□ -0.47
COL8A1-203ENST00000452013 COL14A1Q05707 1796 aaKnown RBP12.13□□□□□ -0.47
COL8A1-203ENST00000452013 MAP3K19Q56UN5 1328 aa12.12□□□□□ -0.47
COL8A1-203ENST00000452013 WDR17Q8IZU2 1322 aa12.12□□□□□ -0.47
COL8A1-203ENST00000452013 PER1O15534 1290 aaPredicted RBP12.12□□□□□ -0.47
COL8A1-203ENST00000452013 RRS1Q15050 365 aaKnown RBP12.12□□□□□ -0.47
COL8A1-203ENST00000452013 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
COL8A1-203ENST00000452013 CARD10Q9BWT7 1032 aa12.12□□□□□ -0.47
COL8A1-203ENST00000452013 NSD2O96028 1365 aa12.12□□□□□ -0.47
COL8A1-203ENST00000452013 NRKQ7Z2Y5 1582 aa12.12□□□□□ -0.47
COL8A1-203ENST00000452013 PIK3C2AO00443 1686 aa12.12□□□□□ -0.47
COL8A1-203ENST00000452013 MON2Q7Z3U7 1717 aa12.11□□□□□ -0.47
COL8A1-203ENST00000452013 CAMTA1Q9Y6Y1 1673 aa12.11□□□□□ -0.47
COL8A1-203ENST00000452013 HOXC9P31274 260 aa12.11□□□□□ -0.47
COL8A1-203ENST00000452013 CDCA7Q9BWT1 371 aaPredicted RBP12.11□□□□□ -0.47
COL8A1-203ENST00000452013 NLRP2Q9NX02 1062 aa12.11□□□□□ -0.47
COL8A1-203ENST00000452013 KRT27Q7Z3Y8 459 aa12.1□□□□□ -0.47
COL8A1-203ENST00000452013 LTV1Q96GA3 475 aaPredicted RBP12.1□□□□□ -0.47
COL8A1-203ENST00000452013 PHRF1Q9P1Y6 1649 aaKnown RBP12.1□□□□□ -0.47
COL8A1-203ENST00000452013 RGS12O14924 1447 aa12.1□□□□□ -0.47
COL8A1-203ENST00000452013 CRB1P82279 1406 aa12.1□□□□□ -0.47
COL8A1-203ENST00000452013 COL5A2P05997 1499 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-203ENST00000452013 KIF24Q5T7B8 1368 aa12.09□□□□□ -0.47
COL8A1-203ENST00000452013 PPM1GO15355 546 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-203ENST00000452013 TNNT2P45379 298 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-203ENST00000452013 PDE3BQ13370 1112 aa12.09□□□□□ -0.47
COL8A1-203ENST00000452013 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-203ENST00000452013 NFAT5O94916 1531 aa12.09□□□□□ -0.47
COL8A1-203ENST00000452013 BLMP54132 1417 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-203ENST00000452013 ERBB3P21860 1342 aa12.09□□□□□ -0.47
COL8A1-203ENST00000452013 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
COL8A1-203ENST00000452013 ABCA3Q99758 1704 aa12.08□□□□□ -0.48
COL8A1-203ENST00000452013 MARF1Q9Y4F3 1742 aaKnown RBP12.08□□□□□ -0.48
COL8A1-203ENST00000452013 CRYBG1Q9Y4K1 1723 aa12.08□□□□□ -0.48
COL8A1-203ENST00000452013 RTL1A6NKG5 1358 aa12.07□□□□□ -0.48
COL8A1-203ENST00000452013 EXOC5O00471 708 aa12.07□□□□□ -0.48
COL8A1-203ENST00000452013 HSP90AB2PQ58FF8 381 aa12.07□□□□□ -0.48
COL8A1-203ENST00000452013 CC2D1BQ5T0F9 858 aaKnown RBP12.07□□□□□ -0.48
COL8A1-203ENST00000452013 CCDC125Q86Z20 511 aa12.07□□□□□ -0.48
COL8A1-203ENST00000452013 NWD2Q9ULI1 1742 aa12.07□□□□□ -0.48
COL8A1-203ENST00000452013 EMILIN1Q9Y6C2 1016 aa12.07□□□□□ -0.48
COL8A1-203ENST00000452013 DDB1Q16531 1140 aa12.06□□□□□ -0.48
COL8A1-203ENST00000452013 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
COL8A1-203ENST00000452013 ABCC6O95255 1503 aa12.06□□□□□ -0.48
COL8A1-203ENST00000452013 INSRP06213 1382 aa12.05□□□□□ -0.48
COL8A1-203ENST00000452013 FLT4P35916 1363 aa12.05□□□□□ -0.48
COL8A1-203ENST00000452013 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.05□□□□□ -0.48
COL8A1-203ENST00000452013 GLI3P10071 1580 aa12.05□□□□□ -0.48
COL8A1-203ENST00000452013 NPC1L1Q9UHC9 1359 aa12.05□□□□□ -0.48
COL8A1-203ENST00000452013 SMG6Q86US8 1419 aaKnown RBP12.04□□□□□ -0.48
COL8A1-203ENST00000452013 PLCH1Q4KWH8 1693 aa12.04□□□□□ -0.48
COL8A1-203ENST00000452013 LMO7Q8WWI1 1683 aa12.04□□□□□ -0.48
COL8A1-203ENST00000452013 IL2RBP14784 551 aa12.04□□□□□ -0.48
COL8A1-203ENST00000452013 CNGB1Q14028 1251 aaPredicted RBP12.04□□□□□ -0.48
COL8A1-203ENST00000452013 FAM196AQ6ZSG2 479 aa12.04□□□□□ -0.48
COL8A1-203ENST00000452013 MYOM1P52179 1685 aa12.03□□□□□ -0.48
COL8A1-203ENST00000452013 SF3B2Q13435 895 aaKnown RBP12.03□□□□□ -0.48
COL8A1-203ENST00000452013 NBPF6Q5VWK0 638 aa12.03□□□□□ -0.48
COL8A1-203ENST00000452013 NBPF4Q96M43 638 aa12.03□□□□□ -0.48
COL8A1-203ENST00000452013 USP54Q70EL1 1684 aa12.03□□□□□ -0.48
COL8A1-203ENST00000452013 DDX10Q13206 875 aaKnown RBP12.02□□□□□ -0.49
COL8A1-203ENST00000452013 NRAPQ86VF7 1730 aa12.01□□□□□ -0.49
COL8A1-203ENST00000452013 MTHFSP49914 203 aa12.01□□□□□ -0.49
COL8A1-203ENST00000452013 RAPGEF4Q8WZA2 1011 aa12.01□□□□□ -0.49
COL8A1-203ENST00000452013 COL18A1P39060 1754 aa12□□□□□ -0.49
COL8A1-203ENST00000452013 TATP17735 454 aaPredicted RBP12□□□□□ -0.49
COL8A1-203ENST00000452013 FAM182BQ5T319 152 aa12□□□□□ -0.49
COL8A1-203ENST00000452013 ZNF316A6NFI3 1004 aaPredicted RBP11.99□□□□□ -0.49
COL8A1-203ENST00000452013 EIF4A2Q14240 407 aaKnown RBP11.99□□□□□ -0.49
COL8A1-203ENST00000452013 EYA1Q99502 592 aa11.99□□□□□ -0.49
COL8A1-203ENST00000452013 USHBP1Q8N6Y0 703 aa11.98□□□□□ -0.49
COL8A1-203ENST00000452013 MARCH10Q8NA82 808 aaPredicted RBP11.98□□□□□ -0.49
COL8A1-203ENST00000452013 ZCRB1Q8TBF4 217 aaKnown RBP11.98□□□□□ -0.49
COL8A1-203ENST00000452013 CFAP53Q96M91 514 aa11.98□□□□□ -0.49
COL8A1-203ENST00000452013 DISP2A7MBM2 1401 aa11.97□□□□□ -0.49
COL8A1-203ENST00000452013 DIAPH1O60610 1272 aaKnown RBP11.97□□□□□ -0.49
COL8A1-203ENST00000452013 DDX54Q8TDD1 881 aaKnown RBP11.97□□□□□ -0.49
COL8A1-203ENST00000452013 TRIM37O94972 964 aa11.96□□□□□ -0.49
COL8A1-203ENST00000452013 IL13P35225 146 aa11.96□□□□□ -0.49
COL8A1-203ENST00000452013 BAG6P46379 1132 aa11.96□□□□□ -0.49
COL8A1-203ENST00000452013 SPG7Q9UQ90 795 aa11.96□□□□□ -0.49
COL8A1-203ENST00000452013 PPP2R1AP30153 589 aa11.95□□□□□ -0.5
COL8A1-203ENST00000452013 RALBP1Q15311 655 aa11.95□□□□□ -0.5
COL8A1-203ENST00000452013 APBA3O96018 575 aa11.94□□□□□ -0.5
COL8A1-203ENST00000452013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL8A1-203ENST00000452013 NUDCQ9Y266 331 aa11.94□□□□□ -0.5
COL8A1-203ENST00000452013 KIF20BQ96Q89 1820 aa11.94□□□□□ -0.5
COL8A1-203ENST00000452013 OVOS2A0A0G2JMS6 1433 aa11.94□□□□□ -0.5
COL8A1-203ENST00000452013 IGSF1Q8N6C5 1336 aa11.93□□□□□ -0.5
COL8A1-203ENST00000452013 PLEKHO1Q53GL0 409 aaPredicted RBP11.93□□□□□ -0.5
COL8A1-203ENST00000452013 SULT6B1Q6IMI4 303 aa11.93□□□□□ -0.5
COL8A1-203ENST00000452013 BCL11BQ9C0K0 894 aaPredicted RBP11.93□□□□□ -0.5
COL8A1-203ENST00000452013 THSD7AQ9UPZ6 1657 aa11.93□□□□□ -0.5
COL8A1-203ENST00000452013 AMOTQ4VCS5 1084 aa11.92□□□□□ -0.5
COL8A1-203ENST00000452013 BCL9O00512 1426 aa11.92□□□□□ -0.5
COL8A1-203ENST00000452013 TNS2Q63HR2 1409 aa11.92□□□□□ -0.5
COL8A1-203ENST00000452013 U2SURPO15042 1029 aaKnown RBP11.91□□□□□ -0.5
COL8A1-203ENST00000452013 DEFB132Q7Z7B7 95 aa11.91□□□□□ -0.5
COL8A1-203ENST00000452013 PCDH11XQ9BZA7 1347 aa11.9□□□□□ -0.5
COL8A1-203ENST00000452013 PCDH11YQ9BZA8 1340 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms