RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 THRAP3Q9Y2W1 955 aaKnown RBP17.27■□□□□ 0.36
CSNK1E-211ENST00000451964 ANKRD36BQ8N2N9 1353 aa17.27■□□□□ 0.35
CSNK1E-211ENST00000451964 TOM1L2Q6ZVM7 507 aa17.26■□□□□ 0.35
CSNK1E-211ENST00000451964 DEFB132Q7Z7B7 95 aa17.26■□□□□ 0.35
CSNK1E-211ENST00000451964 CRB1P82279 1406 aa17.26■□□□□ 0.35
CSNK1E-211ENST00000451964 COL18A1P39060 1754 aa17.25■□□□□ 0.35
CSNK1E-211ENST00000451964 WDR17Q8IZU2 1322 aa17.25■□□□□ 0.35
CSNK1E-211ENST00000451964 OVOS2A0A0J9YW53 1432 aa17.25■□□□□ 0.35
CSNK1E-211ENST00000451964 OVOS2Q6IE36 1432 aa17.25■□□□□ 0.35
CSNK1E-211ENST00000451964 CDCA8Q53HL2 280 aa17.25■□□□□ 0.35
CSNK1E-211ENST00000451964 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
CSNK1E-211ENST00000451964 FBLN1P23142 703 aa17.23■□□□□ 0.35
CSNK1E-211ENST00000451964 CARD14Q9BXL6 1004 aa17.23■□□□□ 0.35
CSNK1E-211ENST00000451964 FYB1O15117 783 aa17.22■□□□□ 0.35
CSNK1E-211ENST00000451964 CSB-PGBD3P0DP91 1061 aa17.22■□□□□ 0.35
CSNK1E-211ENST00000451964 PDE3BQ13370 1112 aa17.22■□□□□ 0.35
CSNK1E-211ENST00000451964 CARD10Q9BWT7 1032 aa17.22■□□□□ 0.35
CSNK1E-211ENST00000451964 EIF4G2P78344 907 aaKnown RBP eCLIP17.21■□□□□ 0.35
CSNK1E-211ENST00000451964 SF3B2Q13435 895 aaKnown RBP17.21■□□□□ 0.35
CSNK1E-211ENST00000451964 COG3Q96JB2 828 aa17.21■□□□□ 0.35
CSNK1E-211ENST00000451964 FAM196AQ6ZSG2 479 aa17.2■□□□□ 0.34
CSNK1E-211ENST00000451964 GGNBP2Q9H3C7 697 aa17.2■□□□□ 0.34
CSNK1E-211ENST00000451964 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
CSNK1E-211ENST00000451964 ERBB3P21860 1342 aa17.19■□□□□ 0.34
CSNK1E-211ENST00000451964 TRIM37O94972 964 aa17.18■□□□□ 0.34
CSNK1E-211ENST00000451964 IP6K1Q92551 441 aa17.18■□□□□ 0.34
CSNK1E-211ENST00000451964 MAP3K19Q56UN5 1328 aa17.18■□□□□ 0.34
CSNK1E-211ENST00000451964 DDB1Q16531 1140 aa17.17■□□□□ 0.34
CSNK1E-211ENST00000451964 ANKRD24Q8TF21 1146 aa17.17■□□□□ 0.34
CSNK1E-211ENST00000451964 C11orf95C9JLR9 678 aaPredicted RBP17.16■□□□□ 0.34
CSNK1E-211ENST00000451964 EN1Q05925 392 aaPredicted RBP17.16■□□□□ 0.34
CSNK1E-211ENST00000451964 POLR3GLQ9BT43 218 aa17.16■□□□□ 0.34
CSNK1E-211ENST00000451964 NLRP2Q9NX02 1062 aa17.16■□□□□ 0.34
CSNK1E-211ENST00000451964 ABCC6O95255 1503 aa17.16■□□□□ 0.34
CSNK1E-211ENST00000451964 DISP2A7MBM2 1401 aa17.15■□□□□ 0.34
CSNK1E-211ENST00000451964 BAG6P46379 1132 aa17.15■□□□□ 0.34
CSNK1E-211ENST00000451964 CDCA7Q9BWT1 371 aaPredicted RBP17.15■□□□□ 0.34
CSNK1E-211ENST00000451964 RRS1Q15050 365 aaKnown RBP17.14■□□□□ 0.33
CSNK1E-211ENST00000451964 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
CSNK1E-211ENST00000451964 CCDC7Q96M83 1385 aa17.14■□□□□ 0.33
CSNK1E-211ENST00000451964 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
CSNK1E-211ENST00000451964 SRCAPQ6ZRS2 3230 aa17.13■□□□□ 0.33
CSNK1E-211ENST00000451964 HOXC9P31274 260 aa17.13■□□□□ 0.33
CSNK1E-211ENST00000451964 LTV1Q96GA3 475 aaPredicted RBP17.13■□□□□ 0.33
CSNK1E-211ENST00000451964 RGPD5Q99666 1765 aa17.12■□□□□ 0.33
CSNK1E-211ENST00000451964 AMPHP49418 695 aa17.12■□□□□ 0.33
CSNK1E-211ENST00000451964 CAMKK2Q96RR4 588 aa17.12■□□□□ 0.33
CSNK1E-211ENST00000451964 PARP4Q9UKK3 1724 aaKnown RBP17.11■□□□□ 0.33
CSNK1E-211ENST00000451964 EXOC5O00471 708 aa17.11■□□□□ 0.33
CSNK1E-211ENST00000451964 APBA3O96018 575 aa17.11■□□□□ 0.33
CSNK1E-211ENST00000451964 EZH2Q15910 746 aaKnown RBP17.11■□□□□ 0.33
CSNK1E-211ENST00000451964 MYOM1P52179 1685 aa17.1■□□□□ 0.33
CSNK1E-211ENST00000451964 PTF1AQ7RTS3 328 aa17.1■□□□□ 0.33
CSNK1E-211ENST00000451964 IL2RBP14784 551 aa17.09■□□□□ 0.33
CSNK1E-211ENST00000451964 PANK3Q9H999 370 aa17.09■□□□□ 0.33
CSNK1E-211ENST00000451964 OVOS2A0A0G2JMS6 1433 aa17.09■□□□□ 0.33
CSNK1E-211ENST00000451964 LTN1O94822 1766 aa17.08■□□□□ 0.33
CSNK1E-211ENST00000451964 LRRC37A3O60309 1634 aa17.08■□□□□ 0.32
CSNK1E-211ENST00000451964 HSP90AB2PQ58FF8 381 aa17.07■□□□□ 0.32
CSNK1E-211ENST00000451964 CGNL1Q0VF96 1302 aa17.06■□□□□ 0.32
CSNK1E-211ENST00000451964 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
CSNK1E-211ENST00000451964 PEAK1Q9H792 1746 aa17.06■□□□□ 0.32
CSNK1E-211ENST00000451964 BCL9O00512 1426 aa17.05■□□□□ 0.32
CSNK1E-211ENST00000451964 RTL1A6NKG5 1358 aa17.05■□□□□ 0.32
CSNK1E-211ENST00000451964 RGPD1P0DJD0 1748 aa17.05■□□□□ 0.32
CSNK1E-211ENST00000451964 TNS1Q9HBL0 1735 aaKnown RBP17.05■□□□□ 0.32
CSNK1E-211ENST00000451964 NBPF6Q5VWK0 638 aa17.05■□□□□ 0.32
CSNK1E-211ENST00000451964 NBPF4Q96M43 638 aa17.05■□□□□ 0.32
CSNK1E-211ENST00000451964 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
CSNK1E-211ENST00000451964 TNS2Q63HR2 1409 aa17.04■□□□□ 0.32
CSNK1E-211ENST00000451964 PSDA5PKW4 1024 aaPredicted RBP17.04■□□□□ 0.32
CSNK1E-211ENST00000451964 INSRP06213 1382 aa17.02■□□□□ 0.32
CSNK1E-211ENST00000451964 KIF7Q2M1P5 1343 aa17.02■□□□□ 0.32
CSNK1E-211ENST00000451964 KCNQ2O43526 872 aa17.02■□□□□ 0.32
CSNK1E-211ENST00000451964 USHBP1Q8N6Y0 703 aa17.02■□□□□ 0.32
CSNK1E-211ENST00000451964 FLT4P35916 1363 aa17.02■□□□□ 0.31
CSNK1E-211ENST00000451964 PARD3Q8TEW0 1356 aa17.02■□□□□ 0.31
CSNK1E-211ENST00000451964 WNK3Q9BYP7 1800 aa17.01■□□□□ 0.31
CSNK1E-211ENST00000451964 POLKQ9UBT6 870 aa17.01■□□□□ 0.31
CSNK1E-211ENST00000451964 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
CSNK1E-211ENST00000451964 PLSCR1O15162 318 aa17■□□□□ 0.31
CSNK1E-211ENST00000451964 PPM1GO15355 546 aaPredicted RBP17■□□□□ 0.31
CSNK1E-211ENST00000451964 TNNT2P45379 298 aaPredicted RBP17■□□□□ 0.31
CSNK1E-211ENST00000451964 R3HDM1Q15032 1099 aaKnown RBP17■□□□□ 0.31
CSNK1E-211ENST00000451964 PROM2Q8N271 834 aa17■□□□□ 0.31
CSNK1E-211ENST00000451964 DDX54Q8TDD1 881 aaKnown RBP17■□□□□ 0.31
CSNK1E-211ENST00000451964 ACSBG1Q96GR2 724 aa17■□□□□ 0.31
CSNK1E-211ENST00000451964 KIF20BQ96Q89 1820 aa16.99■□□□□ 0.31
CSNK1E-211ENST00000451964 WASHC2AQ641Q2 1341 aa16.98■□□□□ 0.31
CSNK1E-211ENST00000451964 MEGF6O75095 1541 aa16.97■□□□□ 0.31
CSNK1E-211ENST00000451964 ZCRB1Q8TBF4 217 aaKnown RBP16.97■□□□□ 0.31
CSNK1E-211ENST00000451964 SMG6Q86US8 1419 aaKnown RBP16.96■□□□□ 0.31
CSNK1E-211ENST00000451964 FAM208AQ9UK61 1670 aaKnown RBP16.96■□□□□ 0.31
CSNK1E-211ENST00000451964 KNSTRNQ9Y448 316 aa16.95■□□□□ 0.3
CSNK1E-211ENST00000451964 PER1O15534 1290 aaPredicted RBP16.94■□□□□ 0.3
CSNK1E-211ENST00000451964 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
CSNK1E-211ENST00000451964 RAPGEF4Q8WZA2 1011 aa16.94■□□□□ 0.3
CSNK1E-211ENST00000451964 SBF2Q86WG5 1849 aa16.93■□□□□ 0.3
CSNK1E-211ENST00000451964 NSD2O96028 1365 aa16.93■□□□□ 0.3
CSNK1E-211ENST00000451964 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms