RNA–Protein interactions for RNA: ENST00000450882.1

MRPL28-206, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-206ENST00000450882 FBLN1P23142 703 aa22.26■■□□□ 1.15
MRPL28-206ENST00000450882 AMPHP49418 695 aa22.26■■□□□ 1.15
MRPL28-206ENST00000450882 AXIN2Q9Y2T1 843 aa22.26■■□□□ 1.15
MRPL28-206ENST00000450882 COL5A2P05997 1499 aaPredicted RBP22.26■■□□□ 1.15
MRPL28-206ENST00000450882 MAP3K19Q56UN5 1328 aa22.26■■□□□ 1.15
MRPL28-206ENST00000450882 ABCC6O95255 1503 aa22.26■■□□□ 1.15
MRPL28-206ENST00000450882 COL18A1P39060 1754 aa22.25■■□□□ 1.15
MRPL28-206ENST00000450882 SPATA31A5Q5VU36 1347 aa22.25■■□□□ 1.15
MRPL28-206ENST00000450882 SPATA31A7Q8IWB4 1347 aa22.25■■□□□ 1.15
MRPL28-206ENST00000450882 CDK12Q9NYV4 1490 aaPredicted RBP22.24■■□□□ 1.15
MRPL28-206ENST00000450882 ANKRD26Q9UPS8 1709 aa22.24■■□□□ 1.15
MRPL28-206ENST00000450882 A0A0G2JS52 829 aa22.24■■□□□ 1.15
MRPL28-206ENST00000450882 TNNT2P45379 298 aaPredicted RBP22.24■■□□□ 1.15
MRPL28-206ENST00000450882 MYT1Q01538 1121 aa22.24■■□□□ 1.15
MRPL28-206ENST00000450882 RRS1Q15050 365 aaKnown RBP22.24■■□□□ 1.15
MRPL28-206ENST00000450882 LARP1Q6PKG0 1096 aaKnown RBP22.24■■□□□ 1.15
MRPL28-206ENST00000450882 MORC1Q86VD1 984 aa22.24■■□□□ 1.15
MRPL28-206ENST00000450882 GLI3P10071 1580 aa22.24■■□□□ 1.15
MRPL28-206ENST00000450882 USP35Q9P2H5 1018 aa22.23■■□□□ 1.15
MRPL28-206ENST00000450882 TOM1L2Q6ZVM7 507 aa22.22■■□□□ 1.15
MRPL28-206ENST00000450882 IP6K1Q92551 441 aa22.22■■□□□ 1.15
MRPL28-206ENST00000450882 RGS12O14924 1447 aa22.22■■□□□ 1.15
MRPL28-206ENST00000450882 RGPD5Q99666 1765 aa22.21■■□□□ 1.15
MRPL28-206ENST00000450882 CNGB1Q14028 1251 aaPredicted RBP22.21■■□□□ 1.15
MRPL28-206ENST00000450882 AMER1Q5JTC6 1135 aaPredicted RBP22.21■■□□□ 1.15
MRPL28-206ENST00000450882 SPATA31A1Q5TZJ5 1347 aa22.21■■□□□ 1.15
MRPL28-206ENST00000450882 WDR17Q8IZU2 1322 aa22.21■■□□□ 1.15
MRPL28-206ENST00000450882 BLMP54132 1417 aaPredicted RBP22.21■■□□□ 1.15
MRPL28-206ENST00000450882 PPM1GO15355 546 aaPredicted RBP22.2■■□□□ 1.14
MRPL28-206ENST00000450882 PER1O15534 1290 aaPredicted RBP22.2■■□□□ 1.14
MRPL28-206ENST00000450882 FAM98CQ17RN3 349 aaKnown RBP22.2■■□□□ 1.14
MRPL28-206ENST00000450882 RTL1A6NKG5 1358 aa22.2■■□□□ 1.14
MRPL28-206ENST00000450882 CRB1P82279 1406 aa22.2■■□□□ 1.14
MRPL28-206ENST00000450882 HOXC9P31274 260 aa22.19■■□□□ 1.14
MRPL28-206ENST00000450882 CC2D1BQ5T0F9 858 aaKnown RBP22.19■■□□□ 1.14
MRPL28-206ENST00000450882 ANKRD24Q8TF21 1146 aa22.19■■□□□ 1.14
MRPL28-206ENST00000450882 LTV1Q96GA3 475 aaPredicted RBP22.19■■□□□ 1.14
MRPL28-206ENST00000450882 TCP11L2Q8N4U5 519 aa22.18■■□□□ 1.14
MRPL28-206ENST00000450882 ERBB3P21860 1342 aa22.17■■□□□ 1.14
MRPL28-206ENST00000450882 SEPT12Q8IYM1 358 aa22.17■■□□□ 1.14
MRPL28-206ENST00000450882 NLRP2Q9NX02 1062 aa22.17■■□□□ 1.14
MRPL28-206ENST00000450882 EMILIN1Q9Y6C2 1016 aa22.17■■□□□ 1.14
MRPL28-206ENST00000450882 FLT4P35916 1363 aa22.16■■□□□ 1.14
MRPL28-206ENST00000450882 KIF24Q5T7B8 1368 aa22.15■■□□□ 1.14
MRPL28-206ENST00000450882 THRAP3Q9Y2W1 955 aaKnown RBP22.15■■□□□ 1.14
MRPL28-206ENST00000450882 SMG6Q86US8 1419 aaKnown RBP22.14■■□□□ 1.14
MRPL28-206ENST00000450882 CARD10Q9BWT7 1032 aa22.14■■□□□ 1.13
MRPL28-206ENST00000450882 NPC1L1Q9UHC9 1359 aa22.13■■□□□ 1.13
MRPL28-206ENST00000450882 MAP2P11137 1827 aaKnown RBP22.13■■□□□ 1.13
MRPL28-206ENST00000450882 ONECUT3O60422 494 aaPredicted RBP22.13■■□□□ 1.13
MRPL28-206ENST00000450882 DDX10Q13206 875 aaKnown RBP22.13■■□□□ 1.13
MRPL28-206ENST00000450882 BARGINQ6ZT62 677 aa22.13■■□□□ 1.13
MRPL28-206ENST00000450882 POLKQ9UBT6 870 aa22.13■■□□□ 1.13
MRPL28-206ENST00000450882 PEAK1Q9H792 1746 aa22.12■■□□□ 1.13
MRPL28-206ENST00000450882 HSP90AB2PQ58FF8 381 aa22.12■■□□□ 1.13
MRPL28-206ENST00000450882 INSRP06213 1382 aa22.12■■□□□ 1.13
MRPL28-206ENST00000450882 FAM208AQ9UK61 1670 aaKnown RBP22.09■■□□□ 1.13
MRPL28-206ENST00000450882 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.13
MRPL28-206ENST00000450882 SOCS7O14512 581 aa22.08■■□□□ 1.13
MRPL28-206ENST00000450882 THSD7AQ9UPZ6 1657 aa22.07■■□□□ 1.12
MRPL28-206ENST00000450882 KRT27Q7Z3Y8 459 aa22.07■■□□□ 1.12
MRPL28-206ENST00000450882 CDCA7Q9BWT1 371 aaPredicted RBP22.07■■□□□ 1.12
MRPL28-206ENST00000450882 BRWD3Q6RI45 1802 aa22.06■■□□□ 1.12
MRPL28-206ENST00000450882 PDE3BQ13370 1112 aa22.05■■□□□ 1.12
MRPL28-206ENST00000450882 DDB1Q16531 1140 aa22.03■■□□□ 1.12
MRPL28-206ENST00000450882 WNK3Q9BYP7 1800 aa22.02■■□□□ 1.12
MRPL28-206ENST00000450882 IL2RBP14784 551 aa22.02■■□□□ 1.12
MRPL28-206ENST00000450882 MTHFSP49914 203 aa22.02■■□□□ 1.12
MRPL28-206ENST00000450882 NBPF6Q5VWK0 638 aa22.02■■□□□ 1.12
MRPL28-206ENST00000450882 USHBP1Q8N6Y0 703 aa22.02■■□□□ 1.12
MRPL28-206ENST00000450882 NBPF4Q96M43 638 aa22.02■■□□□ 1.12
MRPL28-206ENST00000450882 PARP4Q9UKK3 1724 aaKnown RBP22.01■■□□□ 1.11
MRPL28-206ENST00000450882 RGPD2P0DJD1 1756 aa22.01■■□□□ 1.11
MRPL28-206ENST00000450882 DISP2A7MBM2 1401 aa22■■□□□ 1.11
MRPL28-206ENST00000450882 EIF4A2Q14240 407 aaKnown RBP22■■□□□ 1.11
MRPL28-206ENST00000450882 EXOC5O00471 708 aa21.99■■□□□ 1.11
MRPL28-206ENST00000450882 RAPGEF4Q8WZA2 1011 aa21.98■■□□□ 1.11
MRPL28-206ENST00000450882 LRRC37A3O60309 1634 aa21.98■■□□□ 1.11
MRPL28-206ENST00000450882 FAM182BQ5T319 152 aa21.97■■□□□ 1.11
MRPL28-206ENST00000450882 EYA1Q99502 592 aa21.96■■□□□ 1.11
MRPL28-206ENST00000450882 TATP17735 454 aaPredicted RBP21.95■■□□□ 1.1
MRPL28-206ENST00000450882 CFAP53Q96M91 514 aa21.95■■□□□ 1.1
MRPL28-206ENST00000450882 TNS2Q63HR2 1409 aa21.95■■□□□ 1.1
MRPL28-206ENST00000450882 PPP2R1AP30153 589 aa21.94■■□□□ 1.1
MRPL28-206ENST00000450882 UPF1Q92900 1129 aaKnown RBP eCLIP21.94■■□□□ 1.1
MRPL28-206ENST00000450882 EP400Q96L91 3159 aa21.94■■□□□ 1.1
MRPL28-206ENST00000450882 FAM196AQ6ZSG2 479 aa21.93■■□□□ 1.1
MRPL28-206ENST00000450882 PARD3Q8TEW0 1356 aa21.93■■□□□ 1.1
MRPL28-206ENST00000450882 MEGF6O75095 1541 aa21.92■■□□□ 1.1
MRPL28-206ENST00000450882 DIAPH1O60610 1272 aaKnown RBP21.92■■□□□ 1.1
MRPL28-206ENST00000450882 OVOS2A0A0G2JMS6 1433 aa21.91■■□□□ 1.1
MRPL28-206ENST00000450882 RALBP1Q15311 655 aa21.91■■□□□ 1.1
MRPL28-206ENST00000450882 IGSF1Q8N6C5 1336 aa21.9■■□□□ 1.1
MRPL28-206ENST00000450882 IL13P35225 146 aa21.9■■□□□ 1.1
MRPL28-206ENST00000450882 SF3B2Q13435 895 aaKnown RBP21.9■■□□□ 1.1
MRPL28-206ENST00000450882 MARCH10Q8NA82 808 aaPredicted RBP21.9■■□□□ 1.1
MRPL28-206ENST00000450882 ZCRB1Q8TBF4 217 aaKnown RBP21.9■■□□□ 1.1
MRPL28-206ENST00000450882 DDX54Q8TDD1 881 aaKnown RBP21.89■■□□□ 1.09
MRPL28-206ENST00000450882 NCAPD2Q15021 1401 aa21.89■■□□□ 1.09
MRPL28-206ENST00000450882 CCDC125Q86Z20 511 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms