RNA–Protein interactions for RNA: ENST00000448879.5

SEMA3A-205, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-205ENST00000448879 IRF7Q92985 503 aa10.48□□□□□ -0.73
SEMA3A-205ENST00000448879 EMILIN1Q9Y6C2 1016 aa10.48□□□□□ -0.73
SEMA3A-205ENST00000448879 NPAS3Q8IXF0 933 aa10.47□□□□□ -0.73
SEMA3A-205ENST00000448879 LINC00528Q8N1L1 170 aa10.47□□□□□ -0.73
SEMA3A-205ENST00000448879 PTK2Q05397 1052 aa10.46□□□□□ -0.73
SEMA3A-205ENST00000448879 LCE2CQ5TA81 110 aa10.46□□□□□ -0.73
SEMA3A-205ENST00000448879 MEIOBQ8N635 442 aa10.46□□□□□ -0.73
SEMA3A-205ENST00000448879 PGPEP1Q9NXJ5 209 aa10.46□□□□□ -0.73
SEMA3A-205ENST00000448879 ZC3H4Q9UPT8 1303 aaKnown RBP10.46□□□□□ -0.73
SEMA3A-205ENST00000448879 USP17L8P0C7I0 530 aa10.45□□□□□ -0.74
SEMA3A-205ENST00000448879 NEUROD2Q15784 382 aa10.45□□□□□ -0.74
SEMA3A-205ENST00000448879 PCMTD1Q96MG8 357 aaPredicted RBP10.45□□□□□ -0.74
SEMA3A-205ENST00000448879 CDV3Q9UKY7 258 aaKnown RBP10.45□□□□□ -0.74
SEMA3A-205ENST00000448879 H3BM21 787 aa10.44□□□□□ -0.74
SEMA3A-205ENST00000448879 PPP1R26Q5T8A7 1209 aaPredicted RBP10.43□□□□□ -0.74
SEMA3A-205ENST00000448879 KCTD15Q96SI1 283 aaPredicted RBP10.43□□□□□ -0.74
SEMA3A-205ENST00000448879 TSEN34Q9BSV6 310 aaKnown RBP10.43□□□□□ -0.74
SEMA3A-205ENST00000448879 STK17AQ9UEE5 414 aa10.43□□□□□ -0.74
SEMA3A-205ENST00000448879 GMPRP36959 345 aa10.42□□□□□ -0.74
SEMA3A-205ENST00000448879 RFC5P40937 340 aa10.42□□□□□ -0.74
SEMA3A-205ENST00000448879 DHX9Q08211 1270 aaKnown RBP10.41□□□□□ -0.74
SEMA3A-205ENST00000448879 HMX1Q9NP08 348 aaPredicted RBP10.41□□□□□ -0.74
SEMA3A-205ENST00000448879 ADAM32Q8TC27 787 aa10.4□□□□□ -0.74
SEMA3A-205ENST00000448879 EPS8L1Q8TE68 723 aa10.4□□□□□ -0.74
SEMA3A-205ENST00000448879 GPSM3Q9Y4H4 160 aa10.4□□□□□ -0.74
SEMA3A-205ENST00000448879 RAB15P59190 212 aa10.39□□□□□ -0.75
SEMA3A-205ENST00000448879 CBLBQ13191 982 aa10.38□□□□□ -0.75
SEMA3A-205ENST00000448879 NBPF20Q3BBV1 942 aa10.38□□□□□ -0.75
SEMA3A-205ENST00000448879 IL27Q8NEV9 243 aa10.38□□□□□ -0.75
SEMA3A-205ENST00000448879 SOS2Q07890 1332 aaPredicted RBP10.37□□□□□ -0.75
SEMA3A-205ENST00000448879 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
SEMA3A-205ENST00000448879 DZIP3Q86Y13 1208 aaKnown RBP10.37□□□□□ -0.75
SEMA3A-205ENST00000448879 TTLL8A6PVC2 850 aa10.36□□□□□ -0.75
SEMA3A-205ENST00000448879 INTS6LQ5JSJ4 861 aaKnown RBP10.36□□□□□ -0.75
SEMA3A-205ENST00000448879 GOPCQ9HD26 462 aa10.36□□□□□ -0.75
SEMA3A-205ENST00000448879 DNMT3LQ9UJW3 386 aa10.36□□□□□ -0.75
SEMA3A-205ENST00000448879 FAM181BA6NEQ2 426 aa10.35□□□□□ -0.75
SEMA3A-205ENST00000448879 TMEM259Q4ZIN3 620 aa10.35□□□□□ -0.75
SEMA3A-205ENST00000448879 OCSTAMPQ9BR26 566 aa10.35□□□□□ -0.75
SEMA3A-205ENST00000448879 FIGNL2A6NMB9 653 aa10.34□□□□□ -0.75
SEMA3A-205ENST00000448879 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.34□□□□□ -0.75
SEMA3A-205ENST00000448879 Q6ZVU0 165 aa10.33□□□□□ -0.76
SEMA3A-205ENST00000448879 ZSCAN1Q8NBB4 408 aa10.33□□□□□ -0.76
SEMA3A-205ENST00000448879 PPFIA3O75145 1194 aa10.32□□□□□ -0.76
SEMA3A-205ENST00000448879 RELBQ01201 579 aa10.32□□□□□ -0.76
SEMA3A-205ENST00000448879 AGBL1Q96MI9 1066 aa10.32□□□□□ -0.76
SEMA3A-205ENST00000448879 TMPRSS4Q9NRS4 437 aa10.31□□□□□ -0.76
SEMA3A-205ENST00000448879 SPINT1O43278 529 aa10.3□□□□□ -0.76
SEMA3A-205ENST00000448879 POLMQ9NP87 494 aaPredicted RBP10.3□□□□□ -0.76
SEMA3A-205ENST00000448879 TRIM34Q9BYJ4 488 aa10.29□□□□□ -0.76
SEMA3A-205ENST00000448879 VSIG8P0DPA2 414 aa10.28□□□□□ -0.76
SEMA3A-205ENST00000448879 PTSQ03393 145 aa10.28□□□□□ -0.76
SEMA3A-205ENST00000448879 ZNF784Q8NCA9 323 aaPredicted RBP10.28□□□□□ -0.76
SEMA3A-205ENST00000448879 PCDHB9Q9Y5E1 797 aa10.28□□□□□ -0.76
SEMA3A-205ENST00000448879 NISCHQ9Y2I1 1504 aa10.28□□□□□ -0.76
SEMA3A-205ENST00000448879 ERVH48-1M5A8F1 160 aa10.27□□□□□ -0.77
SEMA3A-205ENST00000448879 BRPF1P55201 1214 aaPredicted RBP10.27□□□□□ -0.77
SEMA3A-205ENST00000448879 TRIM52Q96A61 297 aa10.27□□□□□ -0.77
SEMA3A-205ENST00000448879 INSM2Q96T92 566 aaPredicted RBP10.27□□□□□ -0.77
SEMA3A-205ENST00000448879 ZNF395Q9H8N7 513 aaPredicted RBP10.27□□□□□ -0.77
SEMA3A-205ENST00000448879 ZBBXA8MT70 800 aa10.26□□□□□ -0.77
SEMA3A-205ENST00000448879 CTSOP43234 321 aaPredicted RBP10.25□□□□□ -0.77
SEMA3A-205ENST00000448879 ADH1AP07327 375 aa10.24□□□□□ -0.77
SEMA3A-205ENST00000448879 CYLDQ9NQC7 956 aa10.24□□□□□ -0.77
SEMA3A-205ENST00000448879 ESPNB1AK53 854 aa10.23□□□□□ -0.77
SEMA3A-205ENST00000448879 SEPT12Q8IYM1 358 aa10.23□□□□□ -0.77
SEMA3A-205ENST00000448879 CCDC155Q8N6L0 562 aa10.23□□□□□ -0.77
SEMA3A-205ENST00000448879 FBXO45P0C2W1 286 aa10.22□□□□□ -0.77
SEMA3A-205ENST00000448879 GJD4Q96KN9 370 aaPredicted RBP10.22□□□□□ -0.77
SEMA3A-205ENST00000448879 TPRNQ4KMQ1 711 aa10.21□□□□□ -0.77
SEMA3A-205ENST00000448879 LILRA1O75019 489 aa10.2□□□□□ -0.78
SEMA3A-205ENST00000448879 GIGYF1O75420 1035 aaPredicted RBP10.2□□□□□ -0.78
SEMA3A-205ENST00000448879 LORP23490 312 aaPredicted RBP10.2□□□□□ -0.78
SEMA3A-205ENST00000448879 ADD1P35611 737 aaKnown RBP10.2□□□□□ -0.78
SEMA3A-205ENST00000448879 PTGIRP43119 386 aa10.2□□□□□ -0.78
SEMA3A-205ENST00000448879 ZNF330Q9Y3S2 320 aaPredicted RBP10.2□□□□□ -0.78
SEMA3A-205ENST00000448879 CDC14CA4D256 554 aa10.19□□□□□ -0.78
SEMA3A-205ENST00000448879 APBB1O00213 710 aa10.19□□□□□ -0.78
SEMA3A-205ENST00000448879 RNF217Q8TC41 542 aa10.19□□□□□ -0.78
SEMA3A-205ENST00000448879 BANK1Q8NDB2 785 aa10.18□□□□□ -0.78
SEMA3A-205ENST00000448879 ZNF592Q92610 1267 aa10.18□□□□□ -0.78
SEMA3A-205ENST00000448879 NDUFB9Q9Y6M9 179 aa10.18□□□□□ -0.78
SEMA3A-205ENST00000448879 SLC35F4A4IF30 521 aa10.17□□□□□ -0.78
SEMA3A-205ENST00000448879 NR1H3Q13133 447 aa10.17□□□□□ -0.78
SEMA3A-205ENST00000448879 RNF20Q5VTR2 975 aa10.17□□□□□ -0.78
SEMA3A-205ENST00000448879 CNTNAP3BQ96NU0 1288 aa10.17□□□□□ -0.78
SEMA3A-205ENST00000448879 CNTNAP3Q9BZ76 1288 aa10.17□□□□□ -0.78
SEMA3A-205ENST00000448879 ATP5J2-PTCD1G3V325 749 aa10.16□□□□□ -0.78
SEMA3A-205ENST00000448879 ITGA6P23229 1130 aa10.16□□□□□ -0.78
SEMA3A-205ENST00000448879 ESF1Q9H501 851 aaKnown RBP10.16□□□□□ -0.78
SEMA3A-205ENST00000448879 MEN1O00255 615 aa10.15□□□□□ -0.78
SEMA3A-205ENST00000448879 FOXD4L5Q5VV16 416 aaPredicted RBP10.15□□□□□ -0.78
SEMA3A-205ENST00000448879 LYSMD3Q7Z3D4 306 aa10.15□□□□□ -0.78
SEMA3A-205ENST00000448879 GPR161Q8N6U8 529 aaKnown RBP10.15□□□□□ -0.78
SEMA3A-205ENST00000448879 COL25A1Q9BXS0 654 aaPredicted RBP10.15□□□□□ -0.78
SEMA3A-205ENST00000448879 MCCD1P59942 119 aaPredicted RBP10.14□□□□□ -0.79
SEMA3A-205ENST00000448879 SV2AQ7L0J3 742 aa10.14□□□□□ -0.79
SEMA3A-205ENST00000448879 CCDC125Q86Z20 511 aa10.14□□□□□ -0.79
SEMA3A-205ENST00000448879 VWA5B2Q8N398 1253 aa10.14□□□□□ -0.79
SEMA3A-205ENST00000448879 CC2D2BQ6DHV5 1058 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms