RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ADAMTS8Q9UP79 889 aa26.06■■□□□ 1.76
SGCE-207ENST00000447873 KIAA0232Q92628 1395 aa26.06■■□□□ 1.76
SGCE-207ENST00000447873 U2SURPO15042 1029 aaKnown RBP26.04■■□□□ 1.76
SGCE-207ENST00000447873 IL13P35225 146 aa26.04■■□□□ 1.76
SGCE-207ENST00000447873 HSPA1LP34931 641 aa26.03■■□□□ 1.76
SGCE-207ENST00000447873 EIF4A2Q14240 407 aaKnown RBP26.03■■□□□ 1.76
SGCE-207ENST00000447873 JCADQ9P266 1359 aa26.03■■□□□ 1.76
SGCE-207ENST00000447873 U2AF1L5P0DN76 240 aaPredicted RBP26.03■■□□□ 1.76
SGCE-207ENST00000447873 U2AF1Q01081 240 aaKnown RBP eCLIP26.03■■□□□ 1.76
SGCE-207ENST00000447873 YTHDC1Q96MU7 727 aaKnown RBP26.03■■□□□ 1.76
SGCE-207ENST00000447873 PRDM11Q9NQV5 511 aa26.03■■□□□ 1.76
SGCE-207ENST00000447873 BLMP54132 1417 aaPredicted RBP26.01■■□□□ 1.75
SGCE-207ENST00000447873 CHRNA2Q15822 529 aa26.01■■□□□ 1.75
SGCE-207ENST00000447873 RGPD5Q99666 1765 aa26.01■■□□□ 1.75
SGCE-207ENST00000447873 COL18A1P39060 1754 aa26■■□□□ 1.75
SGCE-207ENST00000447873 ABCC6O95255 1503 aa26■■□□□ 1.75
SGCE-207ENST00000447873 LTV1Q96GA3 475 aaPredicted RBP25.99■■□□□ 1.75
SGCE-207ENST00000447873 AXIN2Q9Y2T1 843 aa25.99■■□□□ 1.75
SGCE-207ENST00000447873 NUTM2BA6NNL0 878 aaPredicted RBP25.95■■□□□ 1.75
SGCE-207ENST00000447873 NUTM2EB1AL46 878 aaPredicted RBP25.95■■□□□ 1.75
SGCE-207ENST00000447873 NUTM2AQ8IVF1 878 aaPredicted RBP25.95■■□□□ 1.75
SGCE-207ENST00000447873 RGPD1P0DJD0 1748 aa25.95■■□□□ 1.74
SGCE-207ENST00000447873 ANKRD24Q8TF21 1146 aa25.95■■□□□ 1.74
SGCE-207ENST00000447873 FAM83GA6ND36 823 aa25.94■■□□□ 1.74
SGCE-207ENST00000447873 LMO7Q8WWI1 1683 aa25.93■■□□□ 1.74
SGCE-207ENST00000447873 COL14A1Q05707 1796 aaKnown RBP25.92■■□□□ 1.74
SGCE-207ENST00000447873 ADAMTS2O95450 1211 aa25.92■■□□□ 1.74
SGCE-207ENST00000447873 HMOX1P09601 288 aa25.92■■□□□ 1.74
SGCE-207ENST00000447873 CCDC146Q8IYE0 955 aa25.92■■□□□ 1.74
SGCE-207ENST00000447873 ERBB3P21860 1342 aa25.92■■□□□ 1.74
SGCE-207ENST00000447873 SPATA31A6Q5VVP1 1343 aa25.92■■□□□ 1.74
SGCE-207ENST00000447873 HNRNPUQ00839 825 aaKnown RBP eCLIP25.91■■□□□ 1.74
SGCE-207ENST00000447873 EYA1Q99502 592 aa25.91■■□□□ 1.74
SGCE-207ENST00000447873 PNNQ9H307 717 aaKnown RBP25.91■■□□□ 1.74
SGCE-207ENST00000447873 CAMTA1Q9Y6Y1 1673 aa25.91■■□□□ 1.74
SGCE-207ENST00000447873 FCHSD2O94868 740 aa25.9■■□□□ 1.74
SGCE-207ENST00000447873 IGSF1Q8N6C5 1336 aa25.9■■□□□ 1.74
SGCE-207ENST00000447873 SULT6B1Q6IMI4 303 aa25.9■■□□□ 1.74
SGCE-207ENST00000447873 RGPD2P0DJD1 1756 aa25.89■■□□□ 1.74
SGCE-207ENST00000447873 RUNDC1Q96C34 613 aa25.89■■□□□ 1.73
SGCE-207ENST00000447873 CSB-PGBD3P0DP91 1061 aa25.88■■□□□ 1.73
SGCE-207ENST00000447873 RSPH6AQ9H0K4 717 aa25.88■■□□□ 1.73
SGCE-207ENST00000447873 FAM208AQ9UK61 1670 aaKnown RBP25.87■■□□□ 1.73
SGCE-207ENST00000447873 NBPF6Q5VWK0 638 aa25.87■■□□□ 1.73
SGCE-207ENST00000447873 NBPF4Q96M43 638 aa25.87■■□□□ 1.73
SGCE-207ENST00000447873 AEBP1Q8IUX7 1158 aa25.86■■□□□ 1.73
SGCE-207ENST00000447873 COL5A2P05997 1499 aaPredicted RBP25.86■■□□□ 1.73
SGCE-207ENST00000447873 NEFMP07197 916 aa25.86■■□□□ 1.73
SGCE-207ENST00000447873 PRKAR2BP31323 418 aa25.86■■□□□ 1.73
SGCE-207ENST00000447873 BTG4Q9NY30 223 aa25.86■■□□□ 1.73
SGCE-207ENST00000447873 EVA1CP58658 441 aa25.85■■□□□ 1.73
SGCE-207ENST00000447873 FBXO41Q8TF61 875 aa25.85■■□□□ 1.73
SGCE-207ENST00000447873 PLEKHF1Q96S99 279 aa25.85■■□□□ 1.73
SGCE-207ENST00000447873 MAPK8IP3Q9UPT6 1336 aa25.85■■□□□ 1.73
SGCE-207ENST00000447873 KDRP35968 1356 aa25.84■■□□□ 1.73
SGCE-207ENST00000447873 SENP3-EIF4A1A0A087X0R7 540 aa25.84■■□□□ 1.73
SGCE-207ENST00000447873 NLRP2Q9NX02 1062 aa25.84■■□□□ 1.73
SGCE-207ENST00000447873 PLCH1Q4KWH8 1693 aa25.84■■□□□ 1.73
SGCE-207ENST00000447873 USHBP1Q8N6Y0 703 aa25.83■■□□□ 1.73
SGCE-207ENST00000447873 STRN4Q9NRL3 753 aa25.83■■□□□ 1.73
SGCE-207ENST00000447873 WDR17Q8IZU2 1322 aa25.82■■□□□ 1.72
SGCE-207ENST00000447873 APAF1O14727 1248 aa25.82■■□□□ 1.72
SGCE-207ENST00000447873 LRP6O75581 1613 aa25.81■■□□□ 1.72
SGCE-207ENST00000447873 TOM1L2Q6ZVM7 507 aa25.8■■□□□ 1.72
SGCE-207ENST00000447873 TCP11L2Q8N4U5 519 aa25.8■■□□□ 1.72
SGCE-207ENST00000447873 NCAPD2Q15021 1401 aa25.79■■□□□ 1.72
SGCE-207ENST00000447873 C8orf37Q96NL8 207 aa25.78■■□□□ 1.72
SGCE-207ENST00000447873 NWD2Q9ULI1 1742 aa25.78■■□□□ 1.72
SGCE-207ENST00000447873 MEX3CQ5U5Q3 659 aaKnown RBP25.78■■□□□ 1.72
SGCE-207ENST00000447873 LARP1Q6PKG0 1096 aaKnown RBP25.78■■□□□ 1.72
SGCE-207ENST00000447873 NGLY1Q96IV0 654 aa25.78■■□□□ 1.72
SGCE-207ENST00000447873 PHACTR3Q96KR7 559 aa25.78■■□□□ 1.72
SGCE-207ENST00000447873 SALL2Q9Y467 1007 aaPredicted RBP25.78■■□□□ 1.72
SGCE-207ENST00000447873 ZBED9Q6R2W3 1325 aa25.75■■□□□ 1.71
SGCE-207ENST00000447873 SLIT2O94813 1529 aa25.75■■□□□ 1.71
SGCE-207ENST00000447873 NRAPQ86VF7 1730 aa25.75■■□□□ 1.71
SGCE-207ENST00000447873 NEUROD2Q15784 382 aa25.74■■□□□ 1.71
SGCE-207ENST00000447873 RRP7AQ9Y3A4 280 aaKnown RBP25.74■■□□□ 1.71
SGCE-207ENST00000447873 CRB1P82279 1406 aa25.74■■□□□ 1.71
SGCE-207ENST00000447873 NGEFQ8N5V2 710 aa25.73■■□□□ 1.71
SGCE-207ENST00000447873 CARD10Q9BWT7 1032 aa25.73■■□□□ 1.71
SGCE-207ENST00000447873 TMPOP42166 694 aaKnown RBP25.73■■□□□ 1.71
SGCE-207ENST00000447873 NFE2L2Q16236 605 aa25.71■■□□□ 1.71
SGCE-207ENST00000447873 RAPGEF4Q8WZA2 1011 aa25.71■■□□□ 1.71
SGCE-207ENST00000447873 RIPK4P57078 832 aa25.69■■□□□ 1.7
SGCE-207ENST00000447873 FNBP4Q8N3X1 1017 aaPredicted RBP25.69■■□□□ 1.7
SGCE-207ENST00000447873 USP35Q9P2H5 1018 aa25.69■■□□□ 1.7
SGCE-207ENST00000447873 UNC5CLQ8IV45 518 aa25.69■■□□□ 1.7
SGCE-207ENST00000447873 TATP17735 454 aaPredicted RBP25.68■■□□□ 1.7
SGCE-207ENST00000447873 NCBP3Q53F19 620 aaKnown RBP25.68■■□□□ 1.7
SGCE-207ENST00000447873 DLG5Q8TDM6 1919 aa25.68■■□□□ 1.7
SGCE-207ENST00000447873 MTHFSDQ2M296 383 aaKnown RBP25.67■■□□□ 1.7
SGCE-207ENST00000447873 GAS2L2Q8NHY3 880 aa25.67■■□□□ 1.7
SGCE-207ENST00000447873 BCL9LQ86UU0 1499 aa25.67■■□□□ 1.7
SGCE-207ENST00000447873 PLEKHO1Q53GL0 409 aaPredicted RBP25.66■■□□□ 1.7
SGCE-207ENST00000447873 MEGF6O75095 1541 aa25.66■■□□□ 1.7
SGCE-207ENST00000447873 CCDC27Q2M243 656 aa25.65■■□□□ 1.7
SGCE-207ENST00000447873 AMOTQ4VCS5 1084 aa25.65■■□□□ 1.7
SGCE-207ENST00000447873 USP21Q9UK80 565 aa25.65■■□□□ 1.7
SGCE-207ENST00000447873 PARP4Q9UKK3 1724 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 371.2 ms