RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 CAMTA1Q9Y6Y1 1673 aa15.82■□□□□ 0.12
LINC00408-201ENST00000447784 CCDC125Q86Z20 511 aa15.81■□□□□ 0.12
LINC00408-201ENST00000447784 COG3Q96JB2 828 aa15.81■□□□□ 0.12
LINC00408-201ENST00000447784 KRT27Q7Z3Y8 459 aa15.8■□□□□ 0.12
LINC00408-201ENST00000447784 MON2Q7Z3U7 1717 aa15.8■□□□□ 0.12
LINC00408-201ENST00000447784 LMO7Q8WWI1 1683 aa15.79■□□□□ 0.12
LINC00408-201ENST00000447784 FYB1O15117 783 aa15.79■□□□□ 0.12
LINC00408-201ENST00000447784 LARP1Q6PKG0 1096 aaKnown RBP15.79■□□□□ 0.12
LINC00408-201ENST00000447784 BARGINQ6ZT62 677 aa15.79■□□□□ 0.12
LINC00408-201ENST00000447784 GGNBP2Q9H3C7 697 aa15.79■□□□□ 0.12
LINC00408-201ENST00000447784 THRAP3Q9Y2W1 955 aaKnown RBP15.79■□□□□ 0.12
LINC00408-201ENST00000447784 COL5A2P05997 1499 aaPredicted RBP15.78■□□□□ 0.12
LINC00408-201ENST00000447784 A0A0G2JS52 829 aa15.78■□□□□ 0.12
LINC00408-201ENST00000447784 PER1O15534 1290 aaPredicted RBP15.78■□□□□ 0.12
LINC00408-201ENST00000447784 MYT1Q01538 1121 aa15.78■□□□□ 0.12
LINC00408-201ENST00000447784 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
LINC00408-201ENST00000447784 ZRANB1Q9UGI0 708 aa15.78■□□□□ 0.12
LINC00408-201ENST00000447784 ZBTB7CA1YPR0 619 aa15.77■□□□□ 0.12
LINC00408-201ENST00000447784 MORC1Q86VD1 984 aa15.77■□□□□ 0.12
LINC00408-201ENST00000447784 TCP11L2Q8N4U5 519 aa15.77■□□□□ 0.12
LINC00408-201ENST00000447784 CC2D1BQ5T0F9 858 aaKnown RBP15.76■□□□□ 0.11
LINC00408-201ENST00000447784 AXIN2Q9Y2T1 843 aa15.76■□□□□ 0.11
LINC00408-201ENST00000447784 NFAT5O94916 1531 aa15.76■□□□□ 0.11
LINC00408-201ENST00000447784 OVOS2A0A0J9YW53 1432 aa15.76■□□□□ 0.11
LINC00408-201ENST00000447784 CRB1P82279 1406 aa15.76■□□□□ 0.11
LINC00408-201ENST00000447784 OVOS2Q6IE36 1432 aa15.76■□□□□ 0.11
LINC00408-201ENST00000447784 SOX12O15370 315 aa15.75■□□□□ 0.11
LINC00408-201ENST00000447784 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
LINC00408-201ENST00000447784 USP35Q9P2H5 1018 aa15.75■□□□□ 0.11
LINC00408-201ENST00000447784 NSD2O96028 1365 aa15.75■□□□□ 0.11
LINC00408-201ENST00000447784 WDR17Q8IZU2 1322 aa15.74■□□□□ 0.11
LINC00408-201ENST00000447784 BLMP54132 1417 aaPredicted RBP15.74■□□□□ 0.11
LINC00408-201ENST00000447784 ABCC6O95255 1503 aa15.73■□□□□ 0.11
LINC00408-201ENST00000447784 USP54Q70EL1 1684 aa15.73■□□□□ 0.11
LINC00408-201ENST00000447784 THSD7AQ9UPZ6 1657 aa15.73■□□□□ 0.11
LINC00408-201ENST00000447784 TNNT2P45379 298 aaPredicted RBP15.72■□□□□ 0.11
LINC00408-201ENST00000447784 TOM1L2Q6ZVM7 507 aa15.72■□□□□ 0.11
LINC00408-201ENST00000447784 MYOM1P52179 1685 aa15.71■□□□□ 0.11
LINC00408-201ENST00000447784 CARD10Q9BWT7 1032 aa15.71■□□□□ 0.11
LINC00408-201ENST00000447784 COL18A1P39060 1754 aa15.71■□□□□ 0.11
LINC00408-201ENST00000447784 NPC1L1Q9UHC9 1359 aa15.71■□□□□ 0.11
LINC00408-201ENST00000447784 SF3B2Q13435 895 aaKnown RBP15.7■□□□□ 0.1
LINC00408-201ENST00000447784 CSB-PGBD3P0DP91 1061 aa15.69■□□□□ 0.1
LINC00408-201ENST00000447784 PDE3BQ13370 1112 aa15.69■□□□□ 0.1
LINC00408-201ENST00000447784 CDCA7Q9BWT1 371 aaPredicted RBP15.69■□□□□ 0.1
LINC00408-201ENST00000447784 EP400Q96L91 3159 aa15.69■□□□□ 0.1
LINC00408-201ENST00000447784 ERBB3P21860 1342 aa15.68■□□□□ 0.1
LINC00408-201ENST00000447784 FAM196AQ6ZSG2 479 aa15.68■□□□□ 0.1
LINC00408-201ENST00000447784 BRWD3Q6RI45 1802 aa15.68■□□□□ 0.1
LINC00408-201ENST00000447784 PPM1GO15355 546 aaPredicted RBP15.67■□□□□ 0.1
LINC00408-201ENST00000447784 ANP32CO43423 234 aa15.67■□□□□ 0.1
LINC00408-201ENST00000447784 AMPHP49418 695 aa15.67■□□□□ 0.1
LINC00408-201ENST00000447784 IP6K1Q92551 441 aa15.67■□□□□ 0.1
LINC00408-201ENST00000447784 RALBP1Q15311 655 aa15.66■□□□□ 0.1
LINC00408-201ENST00000447784 FAM182BQ5T319 152 aa15.66■□□□□ 0.1
LINC00408-201ENST00000447784 MAP3K19Q56UN5 1328 aa15.66■□□□□ 0.1
LINC00408-201ENST00000447784 ANKRD24Q8TF21 1146 aa15.65■□□□□ 0.1
LINC00408-201ENST00000447784 FBLN1P23142 703 aa15.64■□□□□ 0.09
LINC00408-201ENST00000447784 BAG6P46379 1132 aa15.64■□□□□ 0.09
LINC00408-201ENST00000447784 RRS1Q15050 365 aaKnown RBP15.64■□□□□ 0.09
LINC00408-201ENST00000447784 DDB1Q16531 1140 aa15.64■□□□□ 0.09
LINC00408-201ENST00000447784 DISP2A7MBM2 1401 aa15.63■□□□□ 0.09
LINC00408-201ENST00000447784 HOXC9P31274 260 aa15.63■□□□□ 0.09
LINC00408-201ENST00000447784 DEFB132Q7Z7B7 95 aa15.63■□□□□ 0.09
LINC00408-201ENST00000447784 RTL1A6NKG5 1358 aa15.62■□□□□ 0.09
LINC00408-201ENST00000447784 DIEXFQ68CQ4 756 aaKnown RBP15.62■□□□□ 0.09
LINC00408-201ENST00000447784 NLRP2Q9NX02 1062 aa15.62■□□□□ 0.09
LINC00408-201ENST00000447784 POLKQ9UBT6 870 aa15.62■□□□□ 0.09
LINC00408-201ENST00000447784 PARP4Q9UKK3 1724 aaKnown RBP15.61■□□□□ 0.09
LINC00408-201ENST00000447784 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
LINC00408-201ENST00000447784 KIF24Q5T7B8 1368 aa15.61■□□□□ 0.09
LINC00408-201ENST00000447784 EXOC5O00471 708 aa15.6■□□□□ 0.09
LINC00408-201ENST00000447784 TRIM37O94972 964 aa15.6■□□□□ 0.09
LINC00408-201ENST00000447784 PPP2R1AP30153 589 aa15.6■□□□□ 0.09
LINC00408-201ENST00000447784 MTHFSP49914 203 aa15.6■□□□□ 0.09
LINC00408-201ENST00000447784 CFAP53Q96M91 514 aa15.6■□□□□ 0.09
LINC00408-201ENST00000447784 PRKRIP1Q9H875 184 aaPredicted RBP15.6■□□□□ 0.09
LINC00408-201ENST00000447784 EMILIN1Q9Y6C2 1016 aa15.6■□□□□ 0.09
LINC00408-201ENST00000447784 OVOS2A0A0G2JMS6 1433 aa15.6■□□□□ 0.09
LINC00408-201ENST00000447784 IL2RBP14784 551 aa15.59■□□□□ 0.09
LINC00408-201ENST00000447784 PARD3Q8TEW0 1356 aa15.59■□□□□ 0.09
LINC00408-201ENST00000447784 BCL9O00512 1426 aa15.59■□□□□ 0.09
LINC00408-201ENST00000447784 LTV1Q96GA3 475 aaPredicted RBP15.58■□□□□ 0.08
LINC00408-201ENST00000447784 MYBBP1AQ9BQG0 1328 aaKnown RBP15.58■□□□□ 0.08
LINC00408-201ENST00000447784 EN1Q05925 392 aaPredicted RBP15.57■□□□□ 0.08
LINC00408-201ENST00000447784 MARCH10Q8NA82 808 aaPredicted RBP15.57■□□□□ 0.08
LINC00408-201ENST00000447784 FLT4P35916 1363 aa15.57■□□□□ 0.08
LINC00408-201ENST00000447784 LTN1O94822 1766 aa15.57■□□□□ 0.08
LINC00408-201ENST00000447784 APBA3O96018 575 aa15.56■□□□□ 0.08
LINC00408-201ENST00000447784 HSP90AB2PQ58FF8 381 aa15.56■□□□□ 0.08
LINC00408-201ENST00000447784 INSRP06213 1382 aa15.56■□□□□ 0.08
LINC00408-201ENST00000447784 TNS2Q63HR2 1409 aa15.56■□□□□ 0.08
LINC00408-201ENST00000447784 LRRC37A3O60309 1634 aa15.56■□□□□ 0.08
LINC00408-201ENST00000447784 RGPD5Q99666 1765 aa15.56■□□□□ 0.08
LINC00408-201ENST00000447784 CAMKK2Q96RR4 588 aa15.55■□□□□ 0.08
LINC00408-201ENST00000447784 RGPD1P0DJD0 1748 aa15.54■□□□□ 0.08
LINC00408-201ENST00000447784 SMG6Q86US8 1419 aaKnown RBP15.54■□□□□ 0.08
LINC00408-201ENST00000447784 BCL11BQ9C0K0 894 aaPredicted RBP15.53■□□□□ 0.08
LINC00408-201ENST00000447784 KIF20BQ96Q89 1820 aa15.52■□□□□ 0.08
LINC00408-201ENST00000447784 PEAK1Q9H792 1746 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms