RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 EN1Q05925 392 aaPredicted RBP33.58■■■□□ 2.97
MRPL28-205ENST00000447696 LARP1Q6PKG0 1096 aaKnown RBP33.58■■■□□ 2.97
MRPL28-205ENST00000447696 NME9Q86XW9 330 aa33.58■■■□□ 2.97
MRPL28-205ENST00000447696 COL18A1P39060 1754 aa33.57■■■□□ 2.97
MRPL28-205ENST00000447696 RGPD1P0DJD0 1748 aa33.56■■■□□ 2.96
MRPL28-205ENST00000447696 ZBTB7CA1YPR0 619 aa33.56■■■□□ 2.96
MRPL28-205ENST00000447696 BARGINQ6ZT62 677 aa33.56■■■□□ 2.96
MRPL28-205ENST00000447696 ABCC6O95255 1503 aa33.56■■■□□ 2.96
MRPL28-205ENST00000447696 ANKRD36BQ8N2N9 1353 aa33.56■■■□□ 2.96
MRPL28-205ENST00000447696 CRB1P82279 1406 aa33.53■■■□□ 2.96
MRPL28-205ENST00000447696 TCP11L2Q8N4U5 519 aa33.53■■■□□ 2.96
MRPL28-205ENST00000447696 THRAP3Q9Y2W1 955 aaKnown RBP33.53■■■□□ 2.96
MRPL28-205ENST00000447696 SOX12O15370 315 aa33.52■■■□□ 2.96
MRPL28-205ENST00000447696 OVOS2A0A0J9YW53 1432 aa33.52■■■□□ 2.96
MRPL28-205ENST00000447696 OVOS2Q6IE36 1432 aa33.52■■■□□ 2.96
MRPL28-205ENST00000447696 USP35Q9P2H5 1018 aa33.51■■■□□ 2.95
MRPL28-205ENST00000447696 R3HDM1Q15032 1099 aaKnown RBP33.5■■■□□ 2.95
MRPL28-205ENST00000447696 AXIN2Q9Y2T1 843 aa33.49■■■□□ 2.95
MRPL28-205ENST00000447696 FAM196AQ6ZSG2 479 aa33.47■■■□□ 2.95
MRPL28-205ENST00000447696 WDR17Q8IZU2 1322 aa33.47■■■□□ 2.95
MRPL28-205ENST00000447696 PARD3Q8TEW0 1356 aa33.46■■■□□ 2.95
MRPL28-205ENST00000447696 FAM182BQ5T319 152 aa33.44■■■□□ 2.94
MRPL28-205ENST00000447696 EIF4G2P78344 907 aaKnown RBP eCLIP33.42■■■□□ 2.94
MRPL28-205ENST00000447696 TOM1L2Q6ZVM7 507 aa33.42■■■□□ 2.94
MRPL28-205ENST00000447696 EZH2Q15910 746 aaKnown RBP33.41■■■□□ 2.94
MRPL28-205ENST00000447696 CAMKK2Q96RR4 588 aa33.41■■■□□ 2.94
MRPL28-205ENST00000447696 PARP4Q9UKK3 1724 aaKnown RBP33.4■■■□□ 2.94
MRPL28-205ENST00000447696 MYOM1P52179 1685 aa33.4■■■□□ 2.94
MRPL28-205ENST00000447696 COG3Q96JB2 828 aa33.4■■■□□ 2.94
MRPL28-205ENST00000447696 RGPD5Q99666 1765 aa33.39■■■□□ 2.94
MRPL28-205ENST00000447696 LTN1O94822 1766 aa33.38■■■□□ 2.93
MRPL28-205ENST00000447696 TNS1Q9HBL0 1735 aaKnown RBP33.37■■■□□ 2.93
MRPL28-205ENST00000447696 TRIM37O94972 964 aa33.36■■■□□ 2.93
MRPL28-205ENST00000447696 CSB-PGBD3P0DP91 1061 aa33.36■■■□□ 2.93
MRPL28-205ENST00000447696 PDE3BQ13370 1112 aa33.36■■■□□ 2.93
MRPL28-205ENST00000447696 CARD10Q9BWT7 1032 aa33.36■■■□□ 2.93
MRPL28-205ENST00000447696 HSPA5P11021 654 aaKnown RBP33.35■■■□□ 2.93
MRPL28-205ENST00000447696 APBA3O96018 575 aa33.34■■■□□ 2.93
MRPL28-205ENST00000447696 CDCA7Q9BWT1 371 aaPredicted RBP33.34■■■□□ 2.93
MRPL28-205ENST00000447696 ERBB3P21860 1342 aa33.33■■■□□ 2.93
MRPL28-205ENST00000447696 CCDC7Q96M83 1385 aa33.33■■■□□ 2.93
MRPL28-205ENST00000447696 FYB1O15117 783 aa33.32■■■□□ 2.92
MRPL28-205ENST00000447696 WNK3Q9BYP7 1800 aa33.32■■■□□ 2.92
MRPL28-205ENST00000447696 NBPF14Q5TI25 921 aa33.31■■■□□ 2.92
MRPL28-205ENST00000447696 LRRC37A3O60309 1634 aa33.3■■■□□ 2.92
MRPL28-205ENST00000447696 C11orf95C9JLR9 678 aaPredicted RBP33.28■■■□□ 2.92
MRPL28-205ENST00000447696 IP6K1Q92551 441 aa33.28■■■□□ 2.92
MRPL28-205ENST00000447696 CARD14Q9BXL6 1004 aa33.27■■■□□ 2.92
MRPL28-205ENST00000447696 KIF20BQ96Q89 1820 aa33.27■■■□□ 2.92
MRPL28-205ENST00000447696 NSD3Q9BZ95 1437 aa33.27■■■□□ 2.92
MRPL28-205ENST00000447696 DDB1Q16531 1140 aa33.26■■■□□ 2.91
MRPL28-205ENST00000447696 GGNBP2Q9H3C7 697 aa33.26■■■□□ 2.91
MRPL28-205ENST00000447696 ANKRD24Q8TF21 1146 aa33.25■■■□□ 2.91
MRPL28-205ENST00000447696 MAP3K19Q56UN5 1328 aa33.25■■■□□ 2.91
MRPL28-205ENST00000447696 RTL1A6NKG5 1358 aa33.23■■■□□ 2.91
MRPL28-205ENST00000447696 OVOS2A0A0G2JMS6 1433 aa33.23■■■□□ 2.91
MRPL28-205ENST00000447696 NLRP2Q9NX02 1062 aa33.22■■■□□ 2.91
MRPL28-205ENST00000447696 FAM208AQ9UK61 1670 aaKnown RBP33.2■■■□□ 2.91
MRPL28-205ENST00000447696 PEAK1Q9H792 1746 aa33.2■■■□□ 2.91
MRPL28-205ENST00000447696 YY1P25490 414 aa33.19■■■□□ 2.9
MRPL28-205ENST00000447696 HOXC9P31274 260 aa33.19■■■□□ 2.9
MRPL28-205ENST00000447696 AMPHP49418 695 aa33.19■■■□□ 2.9
MRPL28-205ENST00000447696 POLR3GLQ9BT43 218 aa33.19■■■□□ 2.9
MRPL28-205ENST00000447696 DCAF8L1A6NGE4 600 aa33.18■■■□□ 2.9
MRPL28-205ENST00000447696 CGNL1Q0VF96 1302 aa33.17■■■□□ 2.9
MRPL28-205ENST00000447696 RREB1Q92766 1687 aa33.17■■■□□ 2.9
MRPL28-205ENST00000447696 FBLN1P23142 703 aa33.16■■■□□ 2.9
MRPL28-205ENST00000447696 SPON1Q9HCB6 807 aa33.16■■■□□ 2.9
MRPL28-205ENST00000447696 BCL9O00512 1426 aa33.16■■■□□ 2.9
MRPL28-205ENST00000447696 TNS2Q63HR2 1409 aa33.16■■■□□ 2.9
MRPL28-205ENST00000447696 KIF24Q5T7B8 1368 aa33.14■■■□□ 2.9
MRPL28-205ENST00000447696 EXOC5O00471 708 aa33.13■■■□□ 2.89
MRPL28-205ENST00000447696 RRS1Q15050 365 aaKnown RBP33.13■■■□□ 2.89
MRPL28-205ENST00000447696 PPP1R1BQ9UD71 204 aaPredicted RBP33.13■■■□□ 2.89
MRPL28-205ENST00000447696 IL2RBP14784 551 aa33.12■■■□□ 2.89
MRPL28-205ENST00000447696 MARCH10Q8NA82 808 aaPredicted RBP33.12■■■□□ 2.89
MRPL28-205ENST00000447696 KCNQ2O43526 872 aa33.1■■■□□ 2.89
MRPL28-205ENST00000447696 LTV1Q96GA3 475 aaPredicted RBP33.1■■■□□ 2.89
MRPL28-205ENST00000447696 NUP188Q5SRE5 1749 aa33.1■■■□□ 2.89
MRPL28-205ENST00000447696 FLT4P35916 1363 aa33.08■■■□□ 2.89
MRPL28-205ENST00000447696 SMG6Q86US8 1419 aaKnown RBP33.07■■■□□ 2.88
MRPL28-205ENST00000447696 PANK3Q9H999 370 aa33.06■■■□□ 2.88
MRPL28-205ENST00000447696 INSRP06213 1382 aa33.06■■■□□ 2.88
MRPL28-205ENST00000447696 SBF2Q86WG5 1849 aa33.05■■■□□ 2.88
MRPL28-205ENST00000447696 PLSCR1O15162 318 aa33.03■■■□□ 2.88
MRPL28-205ENST00000447696 ANKRD26Q9UPS8 1709 aa33.02■■■□□ 2.88
MRPL28-205ENST00000447696 BCL11BQ9C0K0 894 aaPredicted RBP33.02■■■□□ 2.88
MRPL28-205ENST00000447696 NSD2O96028 1365 aa33.01■■■□□ 2.88
MRPL28-205ENST00000447696 HSP90AB2PQ58FF8 381 aa33■■■□□ 2.87
MRPL28-205ENST00000447696 KIF7Q2M1P5 1343 aa33■■■□□ 2.87
MRPL28-205ENST00000447696 EMILIN1Q9Y6C2 1016 aa32.99■■■□□ 2.87
MRPL28-205ENST00000447696 RGPD3A6NKT7 1758 aaPredicted RBP32.98■■■□□ 2.87
MRPL28-205ENST00000447696 RGPD4Q7Z3J3 1758 aa32.98■■■□□ 2.87
MRPL28-205ENST00000447696 RGPD2P0DJD1 1756 aa32.96■■■□□ 2.87
MRPL28-205ENST00000447696 NBPF6Q5VWK0 638 aa32.96■■■□□ 2.87
MRPL28-205ENST00000447696 NBPF4Q96M43 638 aa32.96■■■□□ 2.87
MRPL28-205ENST00000447696 WASHC2AQ641Q2 1341 aa32.93■■■□□ 2.86
MRPL28-205ENST00000447696 MEGF6O75095 1541 aa32.92■■■□□ 2.86
MRPL28-205ENST00000447696 NHSQ6T4R5 1651 aa32.92■■■□□ 2.86
MRPL28-205ENST00000447696 PTF1AQ7RTS3 328 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms