RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 PIK3R4Q99570 1358 aa5.44□□□□□ -1.54
PMS1-215ENST00000447232 ADAMTS13Q76LX8 1427 aa5.44□□□□□ -1.54
PMS1-215ENST00000447232 FOSBP53539 338 aa5.43□□□□□ -1.54
PMS1-215ENST00000447232 SOS2Q07890 1332 aaPredicted RBP5.43□□□□□ -1.54
PMS1-215ENST00000447232 DISP2A7MBM2 1401 aa5.43□□□□□ -1.54
PMS1-215ENST00000447232 ARHGEF5Q12774 1597 aa5.43□□□□□ -1.54
PMS1-215ENST00000447232 TRPM2O94759 1503 aa5.43□□□□□ -1.54
PMS1-215ENST00000447232 MAP3K9P80192 1104 aa5.43□□□□□ -1.54
PMS1-215ENST00000447232 KCNK17Q96T54 332 aa5.43□□□□□ -1.54
PMS1-215ENST00000447232 PPP1R15AO75807 674 aaPredicted RBP5.42□□□□□ -1.54
PMS1-215ENST00000447232 BCL2L12Q9HB09 334 aa5.42□□□□□ -1.54
PMS1-215ENST00000447232 UTRNP46939 3433 aa5.42□□□□□ -1.54
PMS1-215ENST00000447232 SLIT2O94813 1529 aa5.42□□□□□ -1.54
PMS1-215ENST00000447232 EHBP1L1Q8N3D4 1523 aa5.42□□□□□ -1.54
PMS1-215ENST00000447232 ONECUT3O60422 494 aaPredicted RBP5.42□□□□□ -1.54
PMS1-215ENST00000447232 BCANQ96GW7 911 aa5.42□□□□□ -1.54
PMS1-215ENST00000447232 RGPD1P0DJD0 1748 aa5.42□□□□□ -1.54
PMS1-215ENST00000447232 NOS1P29475 1434 aa5.41□□□□□ -1.54
PMS1-215ENST00000447232 PTPRUQ92729 1446 aa5.41□□□□□ -1.54
PMS1-215ENST00000447232 EN1Q05925 392 aaPredicted RBP5.41□□□□□ -1.54
PMS1-215ENST00000447232 SEPT12Q8IYM1 358 aa5.41□□□□□ -1.54
PMS1-215ENST00000447232 XRN1Q8IZH2 1706 aaKnown RBP5.41□□□□□ -1.54
PMS1-215ENST00000447232 CHD4Q14839 1912 aa5.41□□□□□ -1.54
PMS1-215ENST00000447232 TNS1Q9HBL0 1735 aaKnown RBP5.41□□□□□ -1.54
PMS1-215ENST00000447232 MYO5BQ9ULV0 1848 aa5.4□□□□□ -1.54
PMS1-215ENST00000447232 CAMK2BQ13554 666 aa5.4□□□□□ -1.54
PMS1-215ENST00000447232 KRT27Q7Z3Y8 459 aa5.4□□□□□ -1.54
PMS1-215ENST00000447232 UNC5CLQ8IV45 518 aa5.4□□□□□ -1.54
PMS1-215ENST00000447232 RIMS2Q9UQ26 1411 aa5.4□□□□□ -1.54
PMS1-215ENST00000447232 LMTK2Q8IWU2 1503 aa5.4□□□□□ -1.55
PMS1-215ENST00000447232 SPRYD3Q8NCJ5 442 aa5.4□□□□□ -1.55
PMS1-215ENST00000447232 VPS9D1Q9Y2B5 631 aa5.4□□□□□ -1.55
PMS1-215ENST00000447232 C1orf167Q5SNV9 1468 aa5.39□□□□□ -1.55
PMS1-215ENST00000447232 AMOTL2Q9Y2J4 779 aa5.39□□□□□ -1.55
PMS1-215ENST00000447232 CEP162Q5TB80 1403 aa5.39□□□□□ -1.55
PMS1-215ENST00000447232 TSPY4P0CV99 314 aa5.39□□□□□ -1.55
PMS1-215ENST00000447232 TSPY10P0CW01 314 aa5.39□□□□□ -1.55
PMS1-215ENST00000447232 ZDHHC16Q969W1 377 aa5.39□□□□□ -1.55
PMS1-215ENST00000447232 ADAM33Q9BZ11 813 aa5.39□□□□□ -1.55
PMS1-215ENST00000447232 ADGRL3Q9HAR2 1447 aa5.39□□□□□ -1.55
PMS1-215ENST00000447232 SLC52A1Q9NWF4 448 aa5.39□□□□□ -1.55
PMS1-215ENST00000447232 DUOX2Q9NRD8 1548 aa5.39□□□□□ -1.55
PMS1-215ENST00000447232 TMEM131LA2VDJ0 1609 aa5.38□□□□□ -1.55
PMS1-215ENST00000447232 NALCNQ8IZF0 1738 aa5.38□□□□□ -1.55
PMS1-215ENST00000447232 PTPREP23469 700 aa5.38□□□□□ -1.55
PMS1-215ENST00000447232 SLC4A5Q9BY07 1137 aa5.38□□□□□ -1.55
PMS1-215ENST00000447232 PCDHGA10Q9Y5H3 936 aa5.38□□□□□ -1.55
PMS1-215ENST00000447232 RPRD2Q5VT52 1461 aaKnown RBP5.38□□□□□ -1.55
PMS1-215ENST00000447232 GCC2Q8IWJ2 1684 aa5.38□□□□□ -1.55
PMS1-215ENST00000447232 RREB1Q92766 1687 aa5.38□□□□□ -1.55
PMS1-215ENST00000447232 UBTFP17480 764 aaKnown RBP5.38□□□□□ -1.55
PMS1-215ENST00000447232 EZH2Q15910 746 aaKnown RBP5.38□□□□□ -1.55
PMS1-215ENST00000447232 CAMKK2Q96RR4 588 aa5.38□□□□□ -1.55
PMS1-215ENST00000447232 PTPN23Q9H3S7 1636 aa5.37□□□□□ -1.55
PMS1-215ENST00000447232 HDGFP51858 240 aaKnown RBP5.37□□□□□ -1.55
PMS1-215ENST00000447232 VPS72Q15906 364 aa5.37□□□□□ -1.55
PMS1-215ENST00000447232 SPON1Q9HCB6 807 aa5.37□□□□□ -1.55
PMS1-215ENST00000447232 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.37□□□□□ -1.55
PMS1-215ENST00000447232 HCSTQ9UBK5 93 aa5.37□□□□□ -1.55
PMS1-215ENST00000447232 PPP1R1BQ9UD71 204 aaPredicted RBP5.37□□□□□ -1.55
PMS1-215ENST00000447232 NUP188Q5SRE5 1749 aa5.37□□□□□ -1.55
PMS1-215ENST00000447232 BHMG1C9JSJ3 638 aaPredicted RBP5.37□□□□□ -1.55
PMS1-215ENST00000447232 KCNQ2O43526 872 aa5.37□□□□□ -1.55
PMS1-215ENST00000447232 GIGYF1O75420 1035 aaPredicted RBP5.37□□□□□ -1.55
PMS1-215ENST00000447232 ZBED2Q9BTP6 218 aa5.37□□□□□ -1.55
PMS1-215ENST00000447232 PARD3Q8TEW0 1356 aa5.37□□□□□ -1.55
PMS1-215ENST00000447232 PXDNQ92626 1479 aa5.36□□□□□ -1.55
PMS1-215ENST00000447232 ERBINQ96RT1 1412 aa5.36□□□□□ -1.55
PMS1-215ENST00000447232 ADGRB2O60241 1585 aa5.36□□□□□ -1.55
PMS1-215ENST00000447232 NWD2Q9ULI1 1742 aa5.36□□□□□ -1.55
PMS1-215ENST00000447232 DPYSL4O14531 572 aa5.36□□□□□ -1.55
PMS1-215ENST00000447232 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.36□□□□□ -1.55
PMS1-215ENST00000447232 ORAI2Q96SN7 254 aa5.36□□□□□ -1.55
PMS1-215ENST00000447232 USP32Q8NFA0 1604 aa5.35□□□□□ -1.55
PMS1-215ENST00000447232 NRXN3Q9Y4C0 1643 aa5.35□□□□□ -1.55
PMS1-215ENST00000447232 STAC3Q96MF2 364 aa5.35□□□□□ -1.55
PMS1-215ENST00000447232 PHF14O94880 888 aa5.35□□□□□ -1.55
PMS1-215ENST00000447232 KCTD12Q96CX2 325 aaKnown RBP5.35□□□□□ -1.55
PMS1-215ENST00000447232 PLCH1Q4KWH8 1693 aa5.34□□□□□ -1.55
PMS1-215ENST00000447232 NRKQ7Z2Y5 1582 aa5.34□□□□□ -1.55
PMS1-215ENST00000447232 PAXIP1Q6ZW49 1069 aaPredicted RBP5.34□□□□□ -1.55
PMS1-215ENST00000447232 CFAP44Q96MT7 982 aa5.34□□□□□ -1.55
PMS1-215ENST00000447232 ADGRL2O95490 1459 aa5.34□□□□□ -1.56
PMS1-215ENST00000447232 KANK1Q14678 1352 aa5.34□□□□□ -1.56
PMS1-215ENST00000447232 TYW1BQ6NUM6 668 aa5.33□□□□□ -1.56
PMS1-215ENST00000447232 FBXW7Q969H0 707 aa5.33□□□□□ -1.56
PMS1-215ENST00000447232 SHANK3Q9BYB0 1731 aa5.33□□□□□ -1.56
PMS1-215ENST00000447232 CASZ1Q86V15 1759 aa5.33□□□□□ -1.56
PMS1-215ENST00000447232 MYOM1P52179 1685 aa5.33□□□□□ -1.56
PMS1-215ENST00000447232 COL9A1P20849 921 aa5.33□□□□□ -1.56
PMS1-215ENST00000447232 KIF15Q9NS87 1388 aa5.33□□□□□ -1.56
PMS1-215ENST00000447232 THSD7AQ9UPZ6 1657 aa5.33□□□□□ -1.56
PMS1-215ENST00000447232 PPP1R3GB7ZBB8 358 aa5.32□□□□□ -1.56
PMS1-215ENST00000447232 FAM182BQ5T319 152 aa5.32□□□□□ -1.56
PMS1-215ENST00000447232 NPHP3Q7Z494 1330 aa5.32□□□□□ -1.56
PMS1-215ENST00000447232 METP08581 1390 aa5.32□□□□□ -1.56
PMS1-215ENST00000447232 NBPF8Q3BBV2 869 aa5.32□□□□□ -1.56
PMS1-215ENST00000447232 NBPF14Q5TI25 921 aa5.32□□□□□ -1.56
PMS1-215ENST00000447232 NRAPQ86VF7 1730 aa5.32□□□□□ -1.56
PMS1-215ENST00000447232 HSPA6P17066 643 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms