RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 FAM181BA6NEQ2 426 aa9.32□□□□□ -0.92
LINC00440-201ENST00000446579 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
LINC00440-201ENST00000446579 ZSCAN1Q8NBB4 408 aa9.3□□□□□ -0.92
LINC00440-201ENST00000446579 SH3RF1Q7Z6J0 888 aa9.29□□□□□ -0.92
LINC00440-201ENST00000446579 LINC00528Q8N1L1 170 aa9.29□□□□□ -0.92
LINC00440-201ENST00000446579 CTDSPL2Q05D32 466 aa9.28□□□□□ -0.92
LINC00440-201ENST00000446579 SH3BP5LQ7L8J4 393 aa9.28□□□□□ -0.92
LINC00440-201ENST00000446579 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
LINC00440-201ENST00000446579 FBXO31Q5XUX0 539 aaPredicted RBP9.27□□□□□ -0.93
LINC00440-201ENST00000446579 CCDC116Q8IYX3 515 aa9.27□□□□□ -0.93
LINC00440-201ENST00000446579 MEIOBQ8N635 442 aa9.27□□□□□ -0.93
LINC00440-201ENST00000446579 MAP4K5Q9Y4K4 846 aa9.26□□□□□ -0.93
LINC00440-201ENST00000446579 EMILIN1Q9Y6C2 1016 aa9.26□□□□□ -0.93
LINC00440-201ENST00000446579 AP1G2O75843 785 aa9.25□□□□□ -0.93
LINC00440-201ENST00000446579 RFC5P40937 340 aa9.25□□□□□ -0.93
LINC00440-201ENST00000446579 TRMT44Q8IYL2 757 aaKnown RBP9.25□□□□□ -0.93
LINC00440-201ENST00000446579 GPKOWQ92917 476 aaPredicted RBP eCLIP9.25□□□□□ -0.93
LINC00440-201ENST00000446579 ERFEQ4G0M1 354 aa9.24□□□□□ -0.93
LINC00440-201ENST00000446579 TMEM259Q4ZIN3 620 aa9.24□□□□□ -0.93
LINC00440-201ENST00000446579 HOMEZQ8IX15 550 aa9.24□□□□□ -0.93
LINC00440-201ENST00000446579 LRRN4Q8WUT4 740 aa9.24□□□□□ -0.93
LINC00440-201ENST00000446579 ARHGAP9Q9BRR9 750 aa9.24□□□□□ -0.93
LINC00440-201ENST00000446579 ZBTB33Q86T24 672 aa9.23□□□□□ -0.93
LINC00440-201ENST00000446579 TSEN34Q9BSV6 310 aaKnown RBP9.23□□□□□ -0.93
LINC00440-201ENST00000446579 SLC10A4Q96EP9 437 aa9.22□□□□□ -0.93
LINC00440-201ENST00000446579 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
LINC00440-201ENST00000446579 DNMT3LQ9UJW3 386 aa9.22□□□□□ -0.93
LINC00440-201ENST00000446579 PPFIA3O75145 1194 aa9.21□□□□□ -0.94
LINC00440-201ENST00000446579 NR6A1Q15406 480 aa9.21□□□□□ -0.94
LINC00440-201ENST00000446579 PPP1R26Q5T8A7 1209 aaPredicted RBP9.21□□□□□ -0.94
LINC00440-201ENST00000446579 PDXDC2PQ6P474 469 aa9.21□□□□□ -0.94
LINC00440-201ENST00000446579 FKBPLQ9UIM3 349 aa9.21□□□□□ -0.94
LINC00440-201ENST00000446579 SOS2Q07890 1332 aaPredicted RBP9.21□□□□□ -0.94
LINC00440-201ENST00000446579 FIGNL2A6NMB9 653 aa9.2□□□□□ -0.94
LINC00440-201ENST00000446579 LORP23490 312 aaPredicted RBP9.2□□□□□ -0.94
LINC00440-201ENST00000446579 CBLBQ13191 982 aa9.2□□□□□ -0.94
LINC00440-201ENST00000446579 TTLL8A6PVC2 850 aa9.19□□□□□ -0.94
LINC00440-201ENST00000446579 USP17L8P0C7I0 530 aa9.19□□□□□ -0.94
LINC00440-201ENST00000446579 KCTD15Q96SI1 283 aaPredicted RBP9.19□□□□□ -0.94
LINC00440-201ENST00000446579 VSIG8P0DPA2 414 aa9.18□□□□□ -0.94
LINC00440-201ENST00000446579 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.18□□□□□ -0.94
LINC00440-201ENST00000446579 SUPT5HO00267 1087 aaKnown RBP9.17□□□□□ -0.94
LINC00440-201ENST00000446579 CDV3Q9UKY7 258 aaKnown RBP9.17□□□□□ -0.94
LINC00440-201ENST00000446579 PTK2Q05397 1052 aa9.16□□□□□ -0.94
LINC00440-201ENST00000446579 DHX9Q08211 1270 aaKnown RBP9.16□□□□□ -0.94
LINC00440-201ENST00000446579 PNMA1Q8ND90 353 aa9.16□□□□□ -0.94
LINC00440-201ENST00000446579 BANK1Q8NDB2 785 aa9.16□□□□□ -0.94
LINC00440-201ENST00000446579 RAB15P59190 212 aa9.15□□□□□ -0.94
LINC00440-201ENST00000446579 ZMYND15Q9H091 742 aa9.15□□□□□ -0.94
LINC00440-201ENST00000446579 ZC3H4Q9UPT8 1303 aaKnown RBP9.14□□□□□ -0.95
LINC00440-201ENST00000446579 PTSQ03393 145 aa9.14□□□□□ -0.95
LINC00440-201ENST00000446579 ADAM32Q8TC27 787 aa9.14□□□□□ -0.95
LINC00440-201ENST00000446579 AGBL1Q96MI9 1066 aa9.14□□□□□ -0.95
LINC00440-201ENST00000446579 RELBQ01201 579 aa9.13□□□□□ -0.95
LINC00440-201ENST00000446579 INTS6LQ5JSJ4 861 aaKnown RBP9.13□□□□□ -0.95
LINC00440-201ENST00000446579 Q6ZVU0 165 aa9.13□□□□□ -0.95
LINC00440-201ENST00000446579 HMX1Q9NP08 348 aaPredicted RBP9.13□□□□□ -0.95
LINC00440-201ENST00000446579 SPINT1O43278 529 aa9.12□□□□□ -0.95
LINC00440-201ENST00000446579 EPS8L1Q8TE68 723 aa9.12□□□□□ -0.95
LINC00440-201ENST00000446579 NBPF20Q3BBV1 942 aa9.11□□□□□ -0.95
LINC00440-201ENST00000446579 POLMQ9NP87 494 aaPredicted RBP9.11□□□□□ -0.95
LINC00440-201ENST00000446579 SOCS7O14512 581 aa9.1□□□□□ -0.95
LINC00440-201ENST00000446579 DZIP3Q86Y13 1208 aaKnown RBP9.1□□□□□ -0.95
LINC00440-201ENST00000446579 CNTNAP3BQ96NU0 1288 aa9.1□□□□□ -0.95
LINC00440-201ENST00000446579 OCSTAMPQ9BR26 566 aa9.1□□□□□ -0.95
LINC00440-201ENST00000446579 CNTNAP3Q9BZ76 1288 aa9.1□□□□□ -0.95
LINC00440-201ENST00000446579 ZNF395Q9H8N7 513 aaPredicted RBP9.1□□□□□ -0.95
LINC00440-201ENST00000446579 TMPRSS4Q9NRS4 437 aa9.1□□□□□ -0.95
LINC00440-201ENST00000446579 GPSM3Q9Y4H4 160 aa9.1□□□□□ -0.95
LINC00440-201ENST00000446579 APBB1O00213 710 aa9.09□□□□□ -0.95
LINC00440-201ENST00000446579 CCDC155Q8N6L0 562 aa9.09□□□□□ -0.95
LINC00440-201ENST00000446579 GPR161Q8N6U8 529 aaKnown RBP9.09□□□□□ -0.95
LINC00440-201ENST00000446579 INSM2Q96T92 566 aaPredicted RBP9.09□□□□□ -0.95
LINC00440-201ENST00000446579 TRIM34Q9BYJ4 488 aa9.09□□□□□ -0.95
LINC00440-201ENST00000446579 CDC14CA4D256 554 aa9.08□□□□□ -0.96
LINC00440-201ENST00000446579 CTSOP43234 321 aaPredicted RBP9.08□□□□□ -0.96
LINC00440-201ENST00000446579 GJD4Q96KN9 370 aaPredicted RBP9.07□□□□□ -0.96
LINC00440-201ENST00000446579 ZNF784Q8NCA9 323 aaPredicted RBP9.06□□□□□ -0.96
LINC00440-201ENST00000446579 COL25A1Q9BXS0 654 aaPredicted RBP9.06□□□□□ -0.96
LINC00440-201ENST00000446579 KRT76Q01546 638 aa9.05□□□□□ -0.96
LINC00440-201ENST00000446579 MTMR14Q8NCE2 650 aa9.05□□□□□ -0.96
LINC00440-201ENST00000446579 SNRKQ9NRH2 765 aa9.05□□□□□ -0.96
LINC00440-201ENST00000446579 SLC35F4A4IF30 521 aa9.04□□□□□ -0.96
LINC00440-201ENST00000446579 ERVH48-1M5A8F1 160 aa9.04□□□□□ -0.96
LINC00440-201ENST00000446579 FLIIQ13045 1269 aa9.04□□□□□ -0.96
LINC00440-201ENST00000446579 VWA5B2Q8N398 1253 aa9.04□□□□□ -0.96
LINC00440-201ENST00000446579 ADH1AP07327 375 aa9.03□□□□□ -0.96
LINC00440-201ENST00000446579 ITGA6P23229 1130 aa9.03□□□□□ -0.96
LINC00440-201ENST00000446579 NDUFB9Q9Y6M9 179 aa9.03□□□□□ -0.96
LINC00440-201ENST00000446579 SV2AQ7L0J3 742 aa9.02□□□□□ -0.97
LINC00440-201ENST00000446579 RNF217Q8TC41 542 aa9.02□□□□□ -0.97
LINC00440-201ENST00000446579 NANOS1Q8WY41 292 aaKnown RBP9.02□□□□□ -0.97
LINC00440-201ENST00000446579 PRM3Q9NNZ6 103 aa9.02□□□□□ -0.97
LINC00440-201ENST00000446579 ADD1P35611 737 aaKnown RBP9.01□□□□□ -0.97
LINC00440-201ENST00000446579 CYLDQ9NQC7 956 aa9.01□□□□□ -0.97
LINC00440-201ENST00000446579 LILRA1O75019 489 aa9□□□□□ -0.97
LINC00440-201ENST00000446579 PTGIRP43119 386 aa9□□□□□ -0.97
LINC00440-201ENST00000446579 RNFT1Q5M7Z0 435 aa9□□□□□ -0.97
LINC00440-201ENST00000446579 SVOPQ8N4V2 548 aa9□□□□□ -0.97
LINC00440-201ENST00000446579 PCDHB9Q9Y5E1 797 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms