RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 SLC12A5Q9H2X9 1139 aa15.9■□□□□ 0.14
CDCA3-203ENST00000446553 WDR17Q8IZU2 1322 aa15.9■□□□□ 0.14
CDCA3-203ENST00000446553 TMC1Q8TDI8 760 aa15.89■□□□□ 0.13
CDCA3-203ENST00000446553 USP35Q9P2H5 1018 aa15.89■□□□□ 0.13
CDCA3-203ENST00000446553 PDE3BQ13370 1112 aa15.88■□□□□ 0.13
CDCA3-203ENST00000446553 CDCA7Q9BWT1 371 aaPredicted RBP15.88■□□□□ 0.13
CDCA3-203ENST00000446553 AXIN2Q9Y2T1 843 aa15.88■□□□□ 0.13
CDCA3-203ENST00000446553 A0A1W2PP64 1363 aa15.87■□□□□ 0.13
CDCA3-203ENST00000446553 TNS1Q9HBL0 1735 aaKnown RBP15.87■□□□□ 0.13
CDCA3-203ENST00000446553 USP47Q96K76 1375 aa15.87■□□□□ 0.13
CDCA3-203ENST00000446553 CARD10Q9BWT7 1032 aa15.86■□□□□ 0.13
CDCA3-203ENST00000446553 PARD3Q8TEW0 1356 aa15.86■□□□□ 0.13
CDCA3-203ENST00000446553 FAM182BQ5T319 152 aa15.85■□□□□ 0.13
CDCA3-203ENST00000446553 TOM1L2Q6ZVM7 507 aa15.85■□□□□ 0.13
CDCA3-203ENST00000446553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.85■□□□□ 0.13
CDCA3-203ENST00000446553 RGPD5Q99666 1765 aa15.85■□□□□ 0.13
CDCA3-203ENST00000446553 OVOS2A0A0J9YW53 1432 aa15.85■□□□□ 0.13
CDCA3-203ENST00000446553 OVOS2Q6IE36 1432 aa15.85■□□□□ 0.13
CDCA3-203ENST00000446553 TMF1P82094 1093 aa15.84■□□□□ 0.13
CDCA3-203ENST00000446553 CDCA8Q53HL2 280 aa15.84■□□□□ 0.13
CDCA3-203ENST00000446553 NME9Q86XW9 330 aa15.84■□□□□ 0.13
CDCA3-203ENST00000446553 ANKRD36BQ8N2N9 1353 aa15.84■□□□□ 0.13
CDCA3-203ENST00000446553 CCDC7Q96M83 1385 aa15.84■□□□□ 0.13
CDCA3-203ENST00000446553 WNK3Q9BYP7 1800 aa15.83■□□□□ 0.12
CDCA3-203ENST00000446553 ZBTB7CA1YPR0 619 aa15.83■□□□□ 0.12
CDCA3-203ENST00000446553 BCL9O00512 1426 aa15.83■□□□□ 0.12
CDCA3-203ENST00000446553 OVOS2A0A0G2JMS6 1433 aa15.82■□□□□ 0.12
CDCA3-203ENST00000446553 LRRC37A3O60309 1634 aa15.82■□□□□ 0.12
CDCA3-203ENST00000446553 PEAK1Q9H792 1746 aa15.82■□□□□ 0.12
CDCA3-203ENST00000446553 LTN1O94822 1766 aa15.81■□□□□ 0.12
CDCA3-203ENST00000446553 TRIM37O94972 964 aa15.81■□□□□ 0.12
CDCA3-203ENST00000446553 ERBB3P21860 1342 aa15.81■□□□□ 0.12
CDCA3-203ENST00000446553 EN1Q05925 392 aaPredicted RBP15.81■□□□□ 0.12
CDCA3-203ENST00000446553 DDB1Q16531 1140 aa15.81■□□□□ 0.12
CDCA3-203ENST00000446553 CAMKK2Q96RR4 588 aa15.81■□□□□ 0.12
CDCA3-203ENST00000446553 SOX12O15370 315 aa15.8■□□□□ 0.12
CDCA3-203ENST00000446553 CSB-PGBD3P0DP91 1061 aa15.79■□□□□ 0.12
CDCA3-203ENST00000446553 APBA3O96018 575 aa15.78■□□□□ 0.12
CDCA3-203ENST00000446553 PCGF6Q9BYE7 350 aa15.78■□□□□ 0.12
CDCA3-203ENST00000446553 SBF2Q86WG5 1849 aa15.78■□□□□ 0.12
CDCA3-203ENST00000446553 COG3Q96JB2 828 aa15.77■□□□□ 0.12
CDCA3-203ENST00000446553 RGPD3A6NKT7 1758 aaPredicted RBP15.77■□□□□ 0.11
CDCA3-203ENST00000446553 RGPD4Q7Z3J3 1758 aa15.77■□□□□ 0.11
CDCA3-203ENST00000446553 EZH2Q15910 746 aaKnown RBP15.76■□□□□ 0.11
CDCA3-203ENST00000446553 IP6K1Q92551 441 aa15.76■□□□□ 0.11
CDCA3-203ENST00000446553 RREB1Q92766 1687 aa15.76■□□□□ 0.11
CDCA3-203ENST00000446553 LRP5O75197 1615 aa15.76■□□□□ 0.11
CDCA3-203ENST00000446553 EXOC5O00471 708 aa15.75■□□□□ 0.11
CDCA3-203ENST00000446553 PLSCR1O15162 318 aa15.75■□□□□ 0.11
CDCA3-203ENST00000446553 FAM208AQ9UK61 1670 aaKnown RBP15.75■□□□□ 0.11
CDCA3-203ENST00000446553 TNS2Q63HR2 1409 aa15.75■□□□□ 0.11
CDCA3-203ENST00000446553 MARCH10Q8NA82 808 aaPredicted RBP15.74■□□□□ 0.11
CDCA3-203ENST00000446553 ANKRD24Q8TF21 1146 aa15.74■□□□□ 0.11
CDCA3-203ENST00000446553 BCL11BQ9C0K0 894 aaPredicted RBP15.74■□□□□ 0.11
CDCA3-203ENST00000446553 RTL1A6NKG5 1358 aa15.74■□□□□ 0.11
CDCA3-203ENST00000446553 FYB1O15117 783 aa15.73■□□□□ 0.11
CDCA3-203ENST00000446553 IL2RBP14784 551 aa15.72■□□□□ 0.11
CDCA3-203ENST00000446553 NLRP2Q9NX02 1062 aa15.72■□□□□ 0.11
CDCA3-203ENST00000446553 NUP188Q5SRE5 1749 aa15.71■□□□□ 0.11
CDCA3-203ENST00000446553 MAP3K19Q56UN5 1328 aa15.71■□□□□ 0.11
CDCA3-203ENST00000446553 MYOM1P52179 1685 aa15.71■□□□□ 0.11
CDCA3-203ENST00000446553 KIF24Q5T7B8 1368 aa15.71■□□□□ 0.11
CDCA3-203ENST00000446553 HOXC9P31274 260 aa15.7■□□□□ 0.1
CDCA3-203ENST00000446553 KIF20BQ96Q89 1820 aa15.69■□□□□ 0.1
CDCA3-203ENST00000446553 PSDA5PKW4 1024 aaPredicted RBP15.69■□□□□ 0.1
CDCA3-203ENST00000446553 NBPF14Q5TI25 921 aa15.69■□□□□ 0.1
CDCA3-203ENST00000446553 CCER1Q8TC90 406 aaPredicted RBP15.69■□□□□ 0.1
CDCA3-203ENST00000446553 AMPHP49418 695 aa15.68■□□□□ 0.1
CDCA3-203ENST00000446553 R3HDM1Q15032 1099 aaKnown RBP15.68■□□□□ 0.1
CDCA3-203ENST00000446553 EIF4G2P78344 907 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDCA3-203ENST00000446553 CARD14Q9BXL6 1004 aa15.67■□□□□ 0.1
CDCA3-203ENST00000446553 GGNBP2Q9H3C7 697 aa15.67■□□□□ 0.1
CDCA3-203ENST00000446553 NHSQ6T4R5 1651 aa15.66■□□□□ 0.1
CDCA3-203ENST00000446553 NSD3Q9BZ95 1437 aa15.65■□□□□ 0.1
CDCA3-203ENST00000446553 INSRP06213 1382 aa15.64■□□□□ 0.09
CDCA3-203ENST00000446553 FLT4P35916 1363 aa15.64■□□□□ 0.09
CDCA3-203ENST00000446553 CGNL1Q0VF96 1302 aa15.64■□□□□ 0.09
CDCA3-203ENST00000446553 SMG6Q86US8 1419 aaKnown RBP15.63■□□□□ 0.09
CDCA3-203ENST00000446553 FBLN1P23142 703 aa15.63■□□□□ 0.09
CDCA3-203ENST00000446553 PTF1AQ7RTS3 328 aa15.63■□□□□ 0.09
CDCA3-203ENST00000446553 RRS1Q15050 365 aaKnown RBP15.62■□□□□ 0.09
CDCA3-203ENST00000446553 PROM2Q8N271 834 aa15.62■□□□□ 0.09
CDCA3-203ENST00000446553 KAT6BQ8WYB5 2073 aa15.62■□□□□ 0.09
CDCA3-203ENST00000446553 HSPA5P11021 654 aaKnown RBP15.61■□□□□ 0.09
CDCA3-203ENST00000446553 LTV1Q96GA3 475 aaPredicted RBP15.61■□□□□ 0.09
CDCA3-203ENST00000446553 ANKRD26Q9UPS8 1709 aa15.6■□□□□ 0.09
CDCA3-203ENST00000446553 RGPD2P0DJD1 1756 aa15.6■□□□□ 0.09
CDCA3-203ENST00000446553 KCNQ2O43526 872 aa15.6■□□□□ 0.09
CDCA3-203ENST00000446553 TXNRD1Q16881 649 aa15.59■□□□□ 0.09
CDCA3-203ENST00000446553 NBPF6Q5VWK0 638 aa15.59■□□□□ 0.09
CDCA3-203ENST00000446553 NBPF4Q96M43 638 aa15.59■□□□□ 0.09
CDCA3-203ENST00000446553 HSP90AB2PQ58FF8 381 aa15.58■□□□□ 0.08
CDCA3-203ENST00000446553 ZCRB1Q8TBF4 217 aaKnown RBP15.58■□□□□ 0.08
CDCA3-203ENST00000446553 BTAF1O14981 1849 aa15.58■□□□□ 0.08
CDCA3-203ENST00000446553 NCAPD2Q15021 1401 aa15.58■□□□□ 0.08
CDCA3-203ENST00000446553 MEGF6O75095 1541 aa15.58■□□□□ 0.08
CDCA3-203ENST00000446553 ANO8Q9HCE9 1232 aaPredicted RBP15.57■□□□□ 0.08
CDCA3-203ENST00000446553 WASHC2AQ641Q2 1341 aa15.57■□□□□ 0.08
CDCA3-203ENST00000446553 NSD2O96028 1365 aa15.57■□□□□ 0.08
CDCA3-203ENST00000446553 SHANK3Q9BYB0 1731 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms