RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 FAM83GA6ND36 823 aa10.18□□□□□ -0.78
SF3A3P1-201ENST00000446317 U2SURPO15042 1029 aaKnown RBP10.18□□□□□ -0.78
SF3A3P1-201ENST00000446317 FAM9BQ8IZU0 186 aa10.18□□□□□ -0.78
SF3A3P1-201ENST00000446317 YTHDC1Q96MU7 727 aaKnown RBP10.18□□□□□ -0.78
SF3A3P1-201ENST00000446317 CRYBG1Q9Y4K1 1723 aa10.18□□□□□ -0.78
SF3A3P1-201ENST00000446317 ZBTB22O15209 634 aa10.17□□□□□ -0.78
SF3A3P1-201ENST00000446317 HOXC9P31274 260 aa10.17□□□□□ -0.78
SF3A3P1-201ENST00000446317 KCNH5Q8NCM2 988 aa10.17□□□□□ -0.78
SF3A3P1-201ENST00000446317 BRD4O60885 1362 aaPredicted RBP10.17□□□□□ -0.78
SF3A3P1-201ENST00000446317 NPC1L1Q9UHC9 1359 aa10.17□□□□□ -0.78
SF3A3P1-201ENST00000446317 CSB-PGBD3P0DP91 1061 aa10.17□□□□□ -0.78
SF3A3P1-201ENST00000446317 ARHGEF25Q86VW2 580 aa10.17□□□□□ -0.78
SF3A3P1-201ENST00000446317 USP35Q9P2H5 1018 aa10.17□□□□□ -0.78
SF3A3P1-201ENST00000446317 LTN1O94822 1766 aa10.16□□□□□ -0.78
SF3A3P1-201ENST00000446317 HMOX1P09601 288 aa10.16□□□□□ -0.78
SF3A3P1-201ENST00000446317 NCBP3Q53F19 620 aaKnown RBP10.16□□□□□ -0.78
SF3A3P1-201ENST00000446317 CCDC146Q8IYE0 955 aa10.16□□□□□ -0.78
SF3A3P1-201ENST00000446317 ANKRD24Q8TF21 1146 aa10.16□□□□□ -0.78
SF3A3P1-201ENST00000446317 BTG4Q9NY30 223 aa10.16□□□□□ -0.78
SF3A3P1-201ENST00000446317 EIF4A2Q14240 407 aaKnown RBP10.15□□□□□ -0.78
SF3A3P1-201ENST00000446317 NGLY1Q96IV0 654 aa10.15□□□□□ -0.78
SF3A3P1-201ENST00000446317 CCDC9Q9Y3X0 531 aaKnown RBP10.15□□□□□ -0.78
SF3A3P1-201ENST00000446317 COL22A1Q8NFW1 1626 aaPredicted RBP10.15□□□□□ -0.79
SF3A3P1-201ENST00000446317 SHPRHQ149N8 1683 aa10.15□□□□□ -0.79
SF3A3P1-201ENST00000446317 MAP2P11137 1827 aaKnown RBP10.14□□□□□ -0.79
SF3A3P1-201ENST00000446317 EVA1CP58658 441 aa10.14□□□□□ -0.79
SF3A3P1-201ENST00000446317 USP54Q70EL1 1684 aa10.14□□□□□ -0.79
SF3A3P1-201ENST00000446317 AEBP1Q8IUX7 1158 aa10.14□□□□□ -0.79
SF3A3P1-201ENST00000446317 IP6K1Q92551 441 aa10.14□□□□□ -0.79
SF3A3P1-201ENST00000446317 CFAP53Q96M91 514 aa10.14□□□□□ -0.79
SF3A3P1-201ENST00000446317 SALL2Q9Y467 1007 aaPredicted RBP10.14□□□□□ -0.79
SF3A3P1-201ENST00000446317 RGPD5Q99666 1765 aa10.13□□□□□ -0.79
SF3A3P1-201ENST00000446317 FLT4P35916 1363 aa10.13□□□□□ -0.79
SF3A3P1-201ENST00000446317 AATKQ6ZMQ8 1374 aa10.13□□□□□ -0.79
SF3A3P1-201ENST00000446317 DIAPH1O60610 1272 aaKnown RBP10.13□□□□□ -0.79
SF3A3P1-201ENST00000446317 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
SF3A3P1-201ENST00000446317 U2AF1L5P0DN76 240 aaPredicted RBP10.13□□□□□ -0.79
SF3A3P1-201ENST00000446317 U2AF1Q01081 240 aaKnown RBP eCLIP10.13□□□□□ -0.79
SF3A3P1-201ENST00000446317 LARP1Q6PKG0 1096 aaKnown RBP10.13□□□□□ -0.79
SF3A3P1-201ENST00000446317 NLRP2Q9NX02 1062 aa10.13□□□□□ -0.79
SF3A3P1-201ENST00000446317 CAMTA1Q9Y6Y1 1673 aa10.13□□□□□ -0.79
SF3A3P1-201ENST00000446317 COL3A1P02461 1466 aaPredicted RBP10.12□□□□□ -0.79
SF3A3P1-201ENST00000446317 WDR43Q15061 677 aaKnown RBP eCLIP10.12□□□□□ -0.79
SF3A3P1-201ENST00000446317 AFF2P51816 1311 aa10.11□□□□□ -0.79
SF3A3P1-201ENST00000446317 IL13P35225 146 aa10.11□□□□□ -0.79
SF3A3P1-201ENST00000446317 NBPF6Q5VWK0 638 aa10.11□□□□□ -0.79
SF3A3P1-201ENST00000446317 TOM1L2Q6ZVM7 507 aa10.11□□□□□ -0.79
SF3A3P1-201ENST00000446317 NBPF4Q96M43 638 aa10.11□□□□□ -0.79
SF3A3P1-201ENST00000446317 ADAMTS8Q9UP79 889 aa10.11□□□□□ -0.79
SF3A3P1-201ENST00000446317 CDK12Q9NYV4 1490 aaPredicted RBP10.11□□□□□ -0.79
SF3A3P1-201ENST00000446317 SPATA31A6Q5VVP1 1343 aa10.11□□□□□ -0.79
SF3A3P1-201ENST00000446317 SULT6B1Q6IMI4 303 aa10.1□□□□□ -0.79
SF3A3P1-201ENST00000446317 EYA1Q99502 592 aa10.1□□□□□ -0.79
SF3A3P1-201ENST00000446317 RTN4Q9NQC3 1192 aaKnown RBP10.1□□□□□ -0.79
SF3A3P1-201ENST00000446317 RGPD2P0DJD1 1756 aa10.1□□□□□ -0.79
SF3A3P1-201ENST00000446317 SMG6Q86US8 1419 aaKnown RBP10.1□□□□□ -0.79
SF3A3P1-201ENST00000446317 PLCH1Q4KWH8 1693 aa10.1□□□□□ -0.79
SF3A3P1-201ENST00000446317 USP21Q9UK80 565 aa10.1□□□□□ -0.79
SF3A3P1-201ENST00000446317 RRP7AQ9Y3A4 280 aaKnown RBP10.1□□□□□ -0.79
SF3A3P1-201ENST00000446317 COL18A1P39060 1754 aa10.1□□□□□ -0.79
SF3A3P1-201ENST00000446317 CPDO75976 1380 aa10.09□□□□□ -0.79
SF3A3P1-201ENST00000446317 INSRP06213 1382 aa10.09□□□□□ -0.79
SF3A3P1-201ENST00000446317 A0A0G2JS52 829 aa10.09□□□□□ -0.79
SF3A3P1-201ENST00000446317 CCER2I3L3R5 266 aa10.09□□□□□ -0.79
SF3A3P1-201ENST00000446317 NEUROD2Q15784 382 aa10.09□□□□□ -0.79
SF3A3P1-201ENST00000446317 PNISRQ8TF01 805 aaKnown RBP10.09□□□□□ -0.79
SF3A3P1-201ENST00000446317 COL5A2P05997 1499 aaPredicted RBP10.09□□□□□ -0.79
SF3A3P1-201ENST00000446317 COL14A1Q05707 1796 aaKnown RBP10.08□□□□□ -0.8
SF3A3P1-201ENST00000446317 ERBB3P21860 1342 aa10.08□□□□□ -0.8
SF3A3P1-201ENST00000446317 LMO7Q8WWI1 1683 aa10.08□□□□□ -0.8
SF3A3P1-201ENST00000446317 RTL1A6NKG5 1358 aa10.08□□□□□ -0.8
SF3A3P1-201ENST00000446317 PRKAR2BP31323 418 aa10.07□□□□□ -0.8
SF3A3P1-201ENST00000446317 NUDCQ9Y266 331 aa10.07□□□□□ -0.8
SF3A3P1-201ENST00000446317 FAM98CQ17RN3 349 aaKnown RBP10.06□□□□□ -0.8
SF3A3P1-201ENST00000446317 PHACTR3Q96KR7 559 aa10.06□□□□□ -0.8
SF3A3P1-201ENST00000446317 WDR17Q8IZU2 1322 aa10.06□□□□□ -0.8
SF3A3P1-201ENST00000446317 BLMP54132 1417 aaPredicted RBP10.05□□□□□ -0.8
SF3A3P1-201ENST00000446317 UNC5CLQ8IV45 518 aa10.05□□□□□ -0.8
SF3A3P1-201ENST00000446317 BCL9LQ86UU0 1499 aa10.05□□□□□ -0.8
SF3A3P1-201ENST00000446317 SLIT2O94813 1529 aa10.05□□□□□ -0.8
SF3A3P1-201ENST00000446317 FAM182BQ5T319 152 aa10.04□□□□□ -0.8
SF3A3P1-201ENST00000446317 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
SF3A3P1-201ENST00000446317 NRAPQ86VF7 1730 aa10.04□□□□□ -0.8
SF3A3P1-201ENST00000446317 IGSF1Q8N6C5 1336 aa10.04□□□□□ -0.8
SF3A3P1-201ENST00000446317 MEGF6O75095 1541 aa10.04□□□□□ -0.8
SF3A3P1-201ENST00000446317 APAF1O14727 1248 aa10.04□□□□□ -0.8
SF3A3P1-201ENST00000446317 HNRNPUQ00839 825 aaKnown RBP eCLIP10.04□□□□□ -0.8
SF3A3P1-201ENST00000446317 QTRT2Q9H974 415 aaKnown RBP10.04□□□□□ -0.8
SF3A3P1-201ENST00000446317 DCTN1Q14203 1278 aa10.03□□□□□ -0.8
SF3A3P1-201ENST00000446317 FNBP4Q8N3X1 1017 aaPredicted RBP10.03□□□□□ -0.8
SF3A3P1-201ENST00000446317 DDX54Q8TDD1 881 aaKnown RBP10.03□□□□□ -0.8
SF3A3P1-201ENST00000446317 THUMPD2Q9BTF0 503 aaKnown RBP10.03□□□□□ -0.8
SF3A3P1-201ENST00000446317 RGS17Q9UGC6 210 aaPredicted RBP10.03□□□□□ -0.8
SF3A3P1-201ENST00000446317 RGPD1P0DJD0 1748 aa10.02□□□□□ -0.8
SF3A3P1-201ENST00000446317 CRB1P82279 1406 aa10.02□□□□□ -0.8
SF3A3P1-201ENST00000446317 MAPK8IP3Q9UPT6 1336 aa10.02□□□□□ -0.8
SF3A3P1-201ENST00000446317 KIF24Q5T7B8 1368 aa10.02□□□□□ -0.81
SF3A3P1-201ENST00000446317 MTHFSDQ2M296 383 aaKnown RBP10.02□□□□□ -0.81
SF3A3P1-201ENST00000446317 POTEAQ6S8J7 498 aa10.02□□□□□ -0.81
SF3A3P1-201ENST00000446317 RAPGEF4Q8WZA2 1011 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms