RNA–Protein interactions for RNA: ENST00000445399.5

TGFA-206, Transcript of transforming growth factor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFA, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-206ENST00000445399 USP21Q9UK80 565 aa17.97■□□□□ 0.47
TGFA-206ENST00000445399 LMO7Q8WWI1 1683 aa17.96■□□□□ 0.47
TGFA-206ENST00000445399 UNC5CLQ8IV45 518 aa17.96■□□□□ 0.47
TGFA-206ENST00000445399 LTN1O94822 1766 aa17.95■□□□□ 0.46
TGFA-206ENST00000445399 PPP2R1AP30153 589 aa17.95■□□□□ 0.46
TGFA-206ENST00000445399 MTHFSP49914 203 aa17.95■□□□□ 0.46
TGFA-206ENST00000445399 RALBP1Q15311 655 aa17.95■□□□□ 0.46
TGFA-206ENST00000445399 HSP90AB2PQ58FF8 381 aa17.95■□□□□ 0.46
TGFA-206ENST00000445399 PRKRIP1Q9H875 184 aaPredicted RBP17.95■□□□□ 0.46
TGFA-206ENST00000445399 PEAK1Q9H792 1746 aa17.95■□□□□ 0.46
TGFA-206ENST00000445399 PLCH1Q4KWH8 1693 aa17.94■□□□□ 0.46
TGFA-206ENST00000445399 STRN4Q9NRL3 753 aa17.94■□□□□ 0.46
TGFA-206ENST00000445399 MAP2P11137 1827 aaKnown RBP17.93■□□□□ 0.46
TGFA-206ENST00000445399 RTL1A6NKG5 1358 aa17.93■□□□□ 0.46
TGFA-206ENST00000445399 FLT4P35916 1363 aa17.93■□□□□ 0.46
TGFA-206ENST00000445399 KIF24Q5T7B8 1368 aa17.93■□□□□ 0.46
TGFA-206ENST00000445399 SMG6Q86US8 1419 aaKnown RBP17.93■□□□□ 0.46
TGFA-206ENST00000445399 EVA1CP58658 441 aa17.93■□□□□ 0.46
TGFA-206ENST00000445399 COL5A2P05997 1499 aaPredicted RBP17.93■□□□□ 0.46
TGFA-206ENST00000445399 ABCC6O95255 1503 aa17.93■□□□□ 0.46
TGFA-206ENST00000445399 ZNF772Q68DY9 489 aaPredicted RBP17.92■□□□□ 0.46
TGFA-206ENST00000445399 LARP1Q6PKG0 1096 aaKnown RBP17.92■□□□□ 0.46
TGFA-206ENST00000445399 ANKRD24Q8TF21 1146 aa17.92■□□□□ 0.46
TGFA-206ENST00000445399 INSRP06213 1382 aa17.91■□□□□ 0.46
TGFA-206ENST00000445399 BLMP54132 1417 aaPredicted RBP17.91■□□□□ 0.46
TGFA-206ENST00000445399 LTV1Q96GA3 475 aaPredicted RBP17.91■□□□□ 0.46
TGFA-206ENST00000445399 QTRT2Q9H974 415 aaKnown RBP17.91■□□□□ 0.46
TGFA-206ENST00000445399 NWD2Q9ULI1 1742 aa17.91■□□□□ 0.46
TGFA-206ENST00000445399 ERBB3P21860 1342 aa17.91■□□□□ 0.46
TGFA-206ENST00000445399 NRAPQ86VF7 1730 aa17.9■□□□□ 0.46
TGFA-206ENST00000445399 RGPD5Q99666 1765 aa17.9■□□□□ 0.46
TGFA-206ENST00000445399 VPS72Q15906 364 aa17.9■□□□□ 0.46
TGFA-206ENST00000445399 POTEAQ6S8J7 498 aa17.89■□□□□ 0.45
TGFA-206ENST00000445399 TRPC5Q9UL62 973 aaPredicted RBP17.89■□□□□ 0.45
TGFA-206ENST00000445399 WDR17Q8IZU2 1322 aa17.89■□□□□ 0.45
TGFA-206ENST00000445399 ATRNO75882 1429 aa17.89■□□□□ 0.45
TGFA-206ENST00000445399 ANP32CO43423 234 aa17.88■□□□□ 0.45
TGFA-206ENST00000445399 CSB-PGBD3P0DP91 1061 aa17.88■□□□□ 0.45
TGFA-206ENST00000445399 MYBBP1AQ9BQG0 1328 aaKnown RBP17.88■□□□□ 0.45
TGFA-206ENST00000445399 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
TGFA-206ENST00000445399 EIF4A2Q14240 407 aaKnown RBP17.87■□□□□ 0.45
TGFA-206ENST00000445399 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.86■□□□□ 0.45
TGFA-206ENST00000445399 DIEXFQ68CQ4 756 aaKnown RBP17.86■□□□□ 0.45
TGFA-206ENST00000445399 TOM1L2Q6ZVM7 507 aa17.86■□□□□ 0.45
TGFA-206ENST00000445399 GJD4Q96KN9 370 aaPredicted RBP17.86■□□□□ 0.45
TGFA-206ENST00000445399 CCDC9Q9Y3X0 531 aaKnown RBP17.86■□□□□ 0.45
TGFA-206ENST00000445399 SPATA31A5Q5VU36 1347 aa17.86■□□□□ 0.45
TGFA-206ENST00000445399 SPATA31A7Q8IWB4 1347 aa17.86■□□□□ 0.45
TGFA-206ENST00000445399 IL13P35225 146 aa17.85■□□□□ 0.45
TGFA-206ENST00000445399 CRB1P82279 1406 aa17.85■□□□□ 0.45
TGFA-206ENST00000445399 SPATA31A1Q5TZJ5 1347 aa17.85■□□□□ 0.45
TGFA-206ENST00000445399 NBPF6Q5VWK0 638 aa17.85■□□□□ 0.45
TGFA-206ENST00000445399 NBPF4Q96M43 638 aa17.85■□□□□ 0.45
TGFA-206ENST00000445399 NLRP2Q9NX02 1062 aa17.85■□□□□ 0.45
TGFA-206ENST00000445399 USP35Q9P2H5 1018 aa17.85■□□□□ 0.45
TGFA-206ENST00000445399 CARD10Q9BWT7 1032 aa17.84■□□□□ 0.45
TGFA-206ENST00000445399 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
TGFA-206ENST00000445399 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
TGFA-206ENST00000445399 CFAP53Q96M91 514 aa17.82■□□□□ 0.44
TGFA-206ENST00000445399 EYA1Q99502 592 aa17.82■□□□□ 0.44
TGFA-206ENST00000445399 RXRBP28702 533 aa17.81■□□□□ 0.44
TGFA-206ENST00000445399 RBM6P78332 1123 aaKnown RBP17.81■□□□□ 0.44
TGFA-206ENST00000445399 TCP11L2Q8N4U5 519 aa17.81■□□□□ 0.44
TGFA-206ENST00000445399 USHBP1Q8N6Y0 703 aa17.81■□□□□ 0.44
TGFA-206ENST00000445399 GLI3P10071 1580 aa17.81■□□□□ 0.44
TGFA-206ENST00000445399 THRAP3Q9Y2W1 955 aaKnown RBP17.8■□□□□ 0.44
TGFA-206ENST00000445399 FAM98CQ17RN3 349 aaKnown RBP17.79■□□□□ 0.44
TGFA-206ENST00000445399 CCDC184Q52MB2 194 aa17.79■□□□□ 0.44
TGFA-206ENST00000445399 BARGINQ6ZT62 677 aa17.79■□□□□ 0.44
TGFA-206ENST00000445399 IGSF1Q8N6C5 1336 aa17.78■□□□□ 0.44
TGFA-206ENST00000445399 ONECUT3O60422 494 aaPredicted RBP17.78■□□□□ 0.44
TGFA-206ENST00000445399 RGPD2P0DJD1 1756 aa17.78■□□□□ 0.44
TGFA-206ENST00000445399 NCAPD2Q15021 1401 aa17.76■□□□□ 0.43
TGFA-206ENST00000445399 FAM208AQ9UK61 1670 aaKnown RBP17.76■□□□□ 0.43
TGFA-206ENST00000445399 U2SURPO15042 1029 aaKnown RBP17.75■□□□□ 0.43
TGFA-206ENST00000445399 SULT6B1Q6IMI4 303 aa17.75■□□□□ 0.43
TGFA-206ENST00000445399 AEBP1Q8IUX7 1158 aa17.75■□□□□ 0.43
TGFA-206ENST00000445399 DISP2A7MBM2 1401 aa17.74■□□□□ 0.43
TGFA-206ENST00000445399 IL2RBP14784 551 aa17.74■□□□□ 0.43
TGFA-206ENST00000445399 SEPT12Q8IYM1 358 aa17.74■□□□□ 0.43
TGFA-206ENST00000445399 NUDCQ9Y266 331 aa17.74■□□□□ 0.43
TGFA-206ENST00000445399 RGPD1P0DJD0 1748 aa17.73■□□□□ 0.43
TGFA-206ENST00000445399 HMOX1P09601 288 aa17.73■□□□□ 0.43
TGFA-206ENST00000445399 MIER1Q8N108 512 aa17.73■□□□□ 0.43
TGFA-206ENST00000445399 KDRP35968 1356 aa17.71■□□□□ 0.43
TGFA-206ENST00000445399 A0A0G2JS52 829 aa17.71■□□□□ 0.43
TGFA-206ENST00000445399 U2AF1L5P0DN76 240 aaPredicted RBP17.71■□□□□ 0.43
TGFA-206ENST00000445399 U2AF1Q01081 240 aaKnown RBP eCLIP17.71■□□□□ 0.43
TGFA-206ENST00000445399 MYT1Q01538 1121 aa17.71■□□□□ 0.43
TGFA-206ENST00000445399 RAPGEF4Q8WZA2 1011 aa17.71■□□□□ 0.43
TGFA-206ENST00000445399 CDCA7Q9BWT1 371 aaPredicted RBP17.71■□□□□ 0.43
TGFA-206ENST00000445399 MEGF6O75095 1541 aa17.71■□□□□ 0.43
TGFA-206ENST00000445399 RGS12O14924 1447 aa17.71■□□□□ 0.43
TGFA-206ENST00000445399 TATP17735 454 aaPredicted RBP17.7■□□□□ 0.42
TGFA-206ENST00000445399 MRS2Q9HD23 443 aa17.7■□□□□ 0.42
TGFA-206ENST00000445399 THSD7AQ9UPZ6 1657 aa17.7■□□□□ 0.42
TGFA-206ENST00000445399 OVOS2A0A0G2JMS6 1433 aa17.68■□□□□ 0.42
TGFA-206ENST00000445399 EXOC5O00471 708 aa17.68■□□□□ 0.42
TGFA-206ENST00000445399 DDB1Q16531 1140 aa17.68■□□□□ 0.42
TGFA-206ENST00000445399 RSPH6AQ9H0K4 717 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms