RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 TRMT44Q8IYL2 757 aaKnown RBP9.19□□□□□ -0.94
LINC01004-201ENST00000445184 ENAMQ9NRM1 1142 aa9.19□□□□□ -0.94
LINC01004-201ENST00000445184 PGPEP1Q9NXJ5 209 aa9.19□□□□□ -0.94
LINC01004-201ENST00000445184 SRSF11Q05519 484 aaKnown RBP9.18□□□□□ -0.94
LINC01004-201ENST00000445184 RSBN1LQ6PCB5 846 aaPredicted RBP9.18□□□□□ -0.94
LINC01004-201ENST00000445184 Q6ZVU0 165 aa9.18□□□□□ -0.94
LINC01004-201ENST00000445184 SPOCK3Q9BQ16 436 aa9.18□□□□□ -0.94
LINC01004-201ENST00000445184 ZBTB3Q9H5J0 574 aa9.18□□□□□ -0.94
LINC01004-201ENST00000445184 PHF20L1A8MW92 1017 aa9.17□□□□□ -0.94
LINC01004-201ENST00000445184 HRCP23327 699 aa9.17□□□□□ -0.94
LINC01004-201ENST00000445184 CBLBQ13191 982 aa9.17□□□□□ -0.94
LINC01004-201ENST00000445184 DIXDC1Q155Q3 683 aa9.17□□□□□ -0.94
LINC01004-201ENST00000445184 KRTAP4-8Q9BYQ9 185 aa9.17□□□□□ -0.94
LINC01004-201ENST00000445184 PCDHB15Q9Y5E8 787 aa9.17□□□□□ -0.94
LINC01004-201ENST00000445184 CELA2BP08218 269 aaPredicted RBP9.16□□□□□ -0.94
LINC01004-201ENST00000445184 NBPF14Q5TI25 921 aa9.16□□□□□ -0.94
LINC01004-201ENST00000445184 DCAF5Q96JK2 942 aa9.16□□□□□ -0.94
LINC01004-201ENST00000445184 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
LINC01004-201ENST00000445184 PPP1R26Q5T8A7 1209 aaPredicted RBP9.15□□□□□ -0.94
LINC01004-201ENST00000445184 BEGAINQ9BUH8 593 aa9.15□□□□□ -0.94
LINC01004-201ENST00000445184 MAGEB6P1A0A0J9YX57 407 aa9.14□□□□□ -0.95
LINC01004-201ENST00000445184 PER1O15534 1290 aaPredicted RBP9.14□□□□□ -0.95
LINC01004-201ENST00000445184 GALNT6Q8NCL4 622 aa9.14□□□□□ -0.95
LINC01004-201ENST00000445184 TBC1D2Q9BYX2 928 aa9.14□□□□□ -0.95
LINC01004-201ENST00000445184 PRPF38BQ5VTL8 546 aaKnown RBP9.13□□□□□ -0.95
LINC01004-201ENST00000445184 SH3BP5LQ7L8J4 393 aa9.13□□□□□ -0.95
LINC01004-201ENST00000445184 CTSOP43234 321 aaPredicted RBP9.12□□□□□ -0.95
LINC01004-201ENST00000445184 BEND7Q8N7W2 519 aaPredicted RBP9.12□□□□□ -0.95
LINC01004-201ENST00000445184 CNTNAP5Q8WYK1 1306 aa9.11□□□□□ -0.95
LINC01004-201ENST00000445184 PROCP04070 461 aa9.11□□□□□ -0.95
LINC01004-201ENST00000445184 ITGB2P05107 769 aa9.11□□□□□ -0.95
LINC01004-201ENST00000445184 GIGYF2Q6Y7W6 1299 aaKnown RBP9.11□□□□□ -0.95
LINC01004-201ENST00000445184 PODNQ7Z5L7 613 aa9.11□□□□□ -0.95
LINC01004-201ENST00000445184 TSC1Q92574 1164 aa9.1□□□□□ -0.95
LINC01004-201ENST00000445184 INSM2Q96T92 566 aaPredicted RBP9.1□□□□□ -0.95
LINC01004-201ENST00000445184 CARD14Q9BXL6 1004 aa9.1□□□□□ -0.95
LINC01004-201ENST00000445184 POLMQ9NP87 494 aaPredicted RBP9.1□□□□□ -0.95
LINC01004-201ENST00000445184 SENP3-EIF4A1A0A087X0R7 540 aa9.09□□□□□ -0.95
LINC01004-201ENST00000445184 K7ELQ4 463 aaPredicted RBP9.09□□□□□ -0.95
LINC01004-201ENST00000445184 GAS6Q14393 721 aa9.09□□□□□ -0.95
LINC01004-201ENST00000445184 CABLES1Q8TDN4 633 aa9.09□□□□□ -0.95
LINC01004-201ENST00000445184 RELBQ01201 579 aa9.08□□□□□ -0.96
LINC01004-201ENST00000445184 DHX9Q08211 1270 aaKnown RBP9.08□□□□□ -0.96
LINC01004-201ENST00000445184 ERFEQ4G0M1 354 aa9.08□□□□□ -0.96
LINC01004-201ENST00000445184 RNF217Q8TC41 542 aa9.08□□□□□ -0.96
LINC01004-201ENST00000445184 AGBL1Q96MI9 1066 aa9.08□□□□□ -0.96
LINC01004-201ENST00000445184 AMHR2Q16671 573 aa9.07□□□□□ -0.96
LINC01004-201ENST00000445184 RIC3Q7Z5B4 369 aa9.07□□□□□ -0.96
LINC01004-201ENST00000445184 NEDD1Q8NHV4 660 aa9.07□□□□□ -0.96
LINC01004-201ENST00000445184 GPKOWQ92917 476 aaPredicted RBP eCLIP9.07□□□□□ -0.96
LINC01004-201ENST00000445184 PSMG3-AS1Q96PY0 264 aa9.06□□□□□ -0.96
LINC01004-201ENST00000445184 CDV3Q9UKY7 258 aaKnown RBP9.06□□□□□ -0.96
LINC01004-201ENST00000445184 PRKCSHP14314 528 aaPredicted RBP9.05□□□□□ -0.96
LINC01004-201ENST00000445184 CSPP1Q1MSJ5 1256 aa9.05□□□□□ -0.96
LINC01004-201ENST00000445184 Q8N3U1 123 aa9.05□□□□□ -0.96
LINC01004-201ENST00000445184 KCTD15Q96SI1 283 aaPredicted RBP9.05□□□□□ -0.96
LINC01004-201ENST00000445184 MBIPQ9NS73 344 aa9.05□□□□□ -0.96
LINC01004-201ENST00000445184 BCRP11274 1271 aa9.04□□□□□ -0.96
LINC01004-201ENST00000445184 ZNF395Q9H8N7 513 aaPredicted RBP9.04□□□□□ -0.96
LINC01004-201ENST00000445184 NUTM2BA6NNL0 878 aaPredicted RBP9.03□□□□□ -0.96
LINC01004-201ENST00000445184 NUTM2EB1AL46 878 aaPredicted RBP9.03□□□□□ -0.96
LINC01004-201ENST00000445184 NUTM2DQ5VT03 806 aaPredicted RBP9.03□□□□□ -0.96
LINC01004-201ENST00000445184 NUTM2AQ8IVF1 878 aaPredicted RBP9.03□□□□□ -0.96
LINC01004-201ENST00000445184 CUEDC1Q9NWM3 386 aaPredicted RBP9.03□□□□□ -0.96
LINC01004-201ENST00000445184 IGF1RP08069 1367 aa9.02□□□□□ -0.97
LINC01004-201ENST00000445184 SLC10A4Q96EP9 437 aa9.02□□□□□ -0.97
LINC01004-201ENST00000445184 BAG6P46379 1132 aa9.01□□□□□ -0.97
LINC01004-201ENST00000445184 FOXR1Q6PIV2 292 aa9.01□□□□□ -0.97
LINC01004-201ENST00000445184 HELBQ8NG08 1087 aaPredicted RBP9.01□□□□□ -0.97
LINC01004-201ENST00000445184 GMCL1Q96IK5 515 aa9.01□□□□□ -0.97
LINC01004-201ENST00000445184 KRTAP9-1A8MXZ3 250 aaPredicted RBP9□□□□□ -0.97
LINC01004-201ENST00000445184 ARHGAP9Q9BRR9 750 aa9□□□□□ -0.97
LINC01004-201ENST00000445184 KRTAP9-2Q9BYQ4 174 aa9□□□□□ -0.97
LINC01004-201ENST00000445184 INTS6LQ5JSJ4 861 aaKnown RBP8.99□□□□□ -0.97
LINC01004-201ENST00000445184 FOXD4L5Q5VV16 416 aaPredicted RBP8.99□□□□□ -0.97
LINC01004-201ENST00000445184 PDXDC2PQ6P474 469 aa8.99□□□□□ -0.97
LINC01004-201ENST00000445184 LYSMD3Q7Z3D4 306 aa8.99□□□□□ -0.97
LINC01004-201ENST00000445184 QPCTQ16769 361 aa8.98□□□□□ -0.97
LINC01004-201ENST00000445184 TRIM22Q8IYM9 498 aa8.98□□□□□ -0.97
LINC01004-201ENST00000445184 ZNF837Q96EG3 531 aaPredicted RBP8.98□□□□□ -0.97
LINC01004-201ENST00000445184 LRRC4BQ9NT99 713 aa8.98□□□□□ -0.97
LINC01004-201ENST00000445184 TUSC1Q2TAM9 212 aa8.97□□□□□ -0.97
LINC01004-201ENST00000445184 ZBTB33Q86T24 672 aa8.97□□□□□ -0.97
LINC01004-201ENST00000445184 ACDQ96AP0 544 aa8.97□□□□□ -0.97
LINC01004-201ENST00000445184 GPR25O00155 361 aa8.96□□□□□ -0.98
LINC01004-201ENST00000445184 LILRB3O75022 631 aa8.96□□□□□ -0.98
LINC01004-201ENST00000445184 ADH1AP07327 375 aa8.96□□□□□ -0.98
LINC01004-201ENST00000445184 BARGINQ6ZT62 677 aa8.96□□□□□ -0.98
LINC01004-201ENST00000445184 LIMD1Q9UGP4 676 aa8.96□□□□□ -0.98
LINC01004-201ENST00000445184 KRTAP9-6A0A140TA67 174 aa8.95□□□□□ -0.98
LINC01004-201ENST00000445184 FURINP09958 794 aa8.95□□□□□ -0.98
LINC01004-201ENST00000445184 PTGIRP43119 386 aa8.95□□□□□ -0.98
LINC01004-201ENST00000445184 KRBA1A5PL33 1030 aa8.93□□□□□ -0.98
LINC01004-201ENST00000445184 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.93□□□□□ -0.983e-9■■□□□ 13
LINC01004-201ENST00000445184 PRICKLE2Q7Z3G6 844 aa8.93□□□□□ -0.98
LINC01004-201ENST00000445184 ALYREFQ86V81 257 aaKnown RBP8.93□□□□□ -0.98
LINC01004-201ENST00000445184 PARP9Q8IXQ6 854 aa8.93□□□□□ -0.98
LINC01004-201ENST00000445184 TMPRSS4Q9NRS4 437 aa8.93□□□□□ -0.98
LINC01004-201ENST00000445184 NSFL1CQ9UNZ2 370 aaKnown RBP8.93□□□□□ -0.98
LINC01004-201ENST00000445184 RHOQP17081 205 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms