RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 OVOS2A0A0J9YW53 1432 aa18.8■□□□□ 0.6
GARNL3-208ENST00000444677 OVOS2Q6IE36 1432 aa18.8■□□□□ 0.6
GARNL3-208ENST00000444677 COG3Q96JB2 828 aa18.79■□□□□ 0.6
GARNL3-208ENST00000444677 NFAT5O94916 1531 aa18.79■□□□□ 0.6
GARNL3-208ENST00000444677 COL5A2P05997 1499 aaPredicted RBP18.78■□□□□ 0.6
GARNL3-208ENST00000444677 LMO7Q8WWI1 1683 aa18.78■□□□□ 0.6
GARNL3-208ENST00000444677 FAM182BQ5T319 152 aa18.77■□□□□ 0.6
GARNL3-208ENST00000444677 KRT27Q7Z3Y8 459 aa18.77■□□□□ 0.6
GARNL3-208ENST00000444677 TCP11L2Q8N4U5 519 aa18.76■□□□□ 0.59
GARNL3-208ENST00000444677 THSD7AQ9UPZ6 1657 aa18.76■□□□□ 0.59
GARNL3-208ENST00000444677 NSD3Q9BZ95 1437 aa18.75■□□□□ 0.59
GARNL3-208ENST00000444677 TOM1L2Q6ZVM7 507 aa18.75■□□□□ 0.59
GARNL3-208ENST00000444677 CSB-PGBD3P0DP91 1061 aa18.74■□□□□ 0.59
GARNL3-208ENST00000444677 BARGINQ6ZT62 677 aa18.74■□□□□ 0.59
GARNL3-208ENST00000444677 PANK3Q9H999 370 aa18.74■□□□□ 0.59
GARNL3-208ENST00000444677 WDR17Q8IZU2 1322 aa18.74■□□□□ 0.59
GARNL3-208ENST00000444677 RRS1Q15050 365 aaKnown RBP18.73■□□□□ 0.59
GARNL3-208ENST00000444677 CRB1P82279 1406 aa18.73■□□□□ 0.59
GARNL3-208ENST00000444677 MAP3K19Q56UN5 1328 aa18.73■□□□□ 0.59
GARNL3-208ENST00000444677 KIF7Q2M1P5 1343 aa18.72■□□□□ 0.59
GARNL3-208ENST00000444677 COL18A1P39060 1754 aa18.71■□□□□ 0.59
GARNL3-208ENST00000444677 ANKRD24Q8TF21 1146 aa18.71■□□□□ 0.59
GARNL3-208ENST00000444677 IP6K1Q92551 441 aa18.71■□□□□ 0.59
GARNL3-208ENST00000444677 MYOM1P52179 1685 aa18.7■□□□□ 0.58
GARNL3-208ENST00000444677 LTV1Q96GA3 475 aaPredicted RBP18.7■□□□□ 0.58
GARNL3-208ENST00000444677 THRAP3Q9Y2W1 955 aaKnown RBP18.7■□□□□ 0.58
GARNL3-208ENST00000444677 RGPD1P0DJD0 1748 aa18.69■□□□□ 0.58
GARNL3-208ENST00000444677 BLMP54132 1417 aaPredicted RBP18.69■□□□□ 0.58
GARNL3-208ENST00000444677 CARD10Q9BWT7 1032 aa18.69■□□□□ 0.58
GARNL3-208ENST00000444677 HOXC9P31274 260 aa18.68■□□□□ 0.58
GARNL3-208ENST00000444677 AMPHP49418 695 aa18.68■□□□□ 0.58
GARNL3-208ENST00000444677 NLRP2Q9NX02 1062 aa18.68■□□□□ 0.58
GARNL3-208ENST00000444677 USP54Q70EL1 1684 aa18.68■□□□□ 0.58
GARNL3-208ENST00000444677 ERBB3P21860 1342 aa18.68■□□□□ 0.58
GARNL3-208ENST00000444677 RGPD5Q99666 1765 aa18.68■□□□□ 0.58
GARNL3-208ENST00000444677 TNS1Q9HBL0 1735 aaKnown RBP18.67■□□□□ 0.58
GARNL3-208ENST00000444677 WNK3Q9BYP7 1800 aa18.67■□□□□ 0.58
GARNL3-208ENST00000444677 PDE3BQ13370 1112 aa18.66■□□□□ 0.58
GARNL3-208ENST00000444677 CGNL1Q0VF96 1302 aa18.66■□□□□ 0.58
GARNL3-208ENST00000444677 EMILIN1Q9Y6C2 1016 aa18.65■□□□□ 0.58
GARNL3-208ENST00000444677 DEFB132Q7Z7B7 95 aa18.64■□□□□ 0.57
GARNL3-208ENST00000444677 CCDC125Q86Z20 511 aa18.64■□□□□ 0.57
GARNL3-208ENST00000444677 TNNT2P45379 298 aaPredicted RBP18.63■□□□□ 0.57
GARNL3-208ENST00000444677 WASHC2AQ641Q2 1341 aa18.63■□□□□ 0.57
GARNL3-208ENST00000444677 DDB1Q16531 1140 aa18.62■□□□□ 0.57
GARNL3-208ENST00000444677 HSP90AB2PQ58FF8 381 aa18.62■□□□□ 0.57
GARNL3-208ENST00000444677 PARP4Q9UKK3 1724 aaKnown RBP18.62■□□□□ 0.57
GARNL3-208ENST00000444677 LTN1O94822 1766 aa18.62■□□□□ 0.57
GARNL3-208ENST00000444677 ABCC6O95255 1503 aa18.61■□□□□ 0.57
GARNL3-208ENST00000444677 DISP2A7MBM2 1401 aa18.61■□□□□ 0.57
GARNL3-208ENST00000444677 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
GARNL3-208ENST00000444677 SF3B2Q13435 895 aaKnown RBP18.61■□□□□ 0.57
GARNL3-208ENST00000444677 FAM196AQ6ZSG2 479 aa18.6■□□□□ 0.57
GARNL3-208ENST00000444677 MARCH10Q8NA82 808 aaPredicted RBP18.6■□□□□ 0.57
GARNL3-208ENST00000444677 PPM1GO15355 546 aaPredicted RBP18.59■□□□□ 0.57
GARNL3-208ENST00000444677 TRIM37O94972 964 aa18.59■□□□□ 0.57
GARNL3-208ENST00000444677 NBPF6Q5VWK0 638 aa18.59■□□□□ 0.57
GARNL3-208ENST00000444677 NBPF4Q96M43 638 aa18.59■□□□□ 0.57
GARNL3-208ENST00000444677 POLKQ9UBT6 870 aa18.59■□□□□ 0.57
GARNL3-208ENST00000444677 KNSTRNQ9Y448 316 aa18.59■□□□□ 0.57
GARNL3-208ENST00000444677 LRRC37A3O60309 1634 aa18.59■□□□□ 0.57
GARNL3-208ENST00000444677 EXOC5O00471 708 aa18.58■□□□□ 0.56
GARNL3-208ENST00000444677 USHBP1Q8N6Y0 703 aa18.58■□□□□ 0.56
GARNL3-208ENST00000444677 CDCA7Q9BWT1 371 aaPredicted RBP18.58■□□□□ 0.56
GARNL3-208ENST00000444677 RTL1A6NKG5 1358 aa18.57■□□□□ 0.56
GARNL3-208ENST00000444677 PER1O15534 1290 aaPredicted RBP18.57■□□□□ 0.56
GARNL3-208ENST00000444677 IL2RBP14784 551 aa18.57■□□□□ 0.56
GARNL3-208ENST00000444677 AMER1Q5JTC6 1135 aaPredicted RBP18.56■□□□□ 0.56
GARNL3-208ENST00000444677 MORC1Q86VD1 984 aa18.56■□□□□ 0.56
GARNL3-208ENST00000444677 INSRP06213 1382 aa18.55■□□□□ 0.56
GARNL3-208ENST00000444677 FLT4P35916 1363 aa18.55■□□□□ 0.56
GARNL3-208ENST00000444677 EN1Q05925 392 aaPredicted RBP18.55■□□□□ 0.56
GARNL3-208ENST00000444677 PTF1AQ7RTS3 328 aa18.55■□□□□ 0.56
GARNL3-208ENST00000444677 CNGB1Q14028 1251 aaPredicted RBP18.54■□□□□ 0.56
GARNL3-208ENST00000444677 KIF20BQ96Q89 1820 aa18.53■□□□□ 0.56
GARNL3-208ENST00000444677 PEAK1Q9H792 1746 aa18.52■□□□□ 0.56
GARNL3-208ENST00000444677 SBF2Q86WG5 1849 aa18.52■□□□□ 0.56
GARNL3-208ENST00000444677 APBA3O96018 575 aa18.52■□□□□ 0.56
GARNL3-208ENST00000444677 BAG6P46379 1132 aa18.52■□□□□ 0.56
GARNL3-208ENST00000444677 EZH2Q15910 746 aaKnown RBP18.51■□□□□ 0.55
GARNL3-208ENST00000444677 CC2D1BQ5T0F9 858 aaKnown RBP18.51■□□□□ 0.55
GARNL3-208ENST00000444677 NSD2O96028 1365 aa18.51■□□□□ 0.55
GARNL3-208ENST00000444677 KIF24Q5T7B8 1368 aa18.51■□□□□ 0.55
GARNL3-208ENST00000444677 OVOS2A0A0G2JMS6 1433 aa18.5■□□□□ 0.55
GARNL3-208ENST00000444677 RREB1Q92766 1687 aa18.5■□□□□ 0.55
GARNL3-208ENST00000444677 EIF4A2Q14240 407 aaKnown RBP18.49■□□□□ 0.55
GARNL3-208ENST00000444677 DDX54Q8TDD1 881 aaKnown RBP18.49■□□□□ 0.55
GARNL3-208ENST00000444677 ACSBG1Q96GR2 724 aa18.49■□□□□ 0.55
GARNL3-208ENST00000444677 EYA1Q99502 592 aa18.49■□□□□ 0.55
GARNL3-208ENST00000444677 NUP188Q5SRE5 1749 aa18.49■□□□□ 0.55
GARNL3-208ENST00000444677 TNS2Q63HR2 1409 aa18.49■□□□□ 0.55
GARNL3-208ENST00000444677 KCNQ2O43526 872 aa18.48■□□□□ 0.55
GARNL3-208ENST00000444677 CAMKK2Q96RR4 588 aa18.48■□□□□ 0.55
GARNL3-208ENST00000444677 SMG6Q86US8 1419 aaKnown RBP18.48■□□□□ 0.55
GARNL3-208ENST00000444677 MEGF6O75095 1541 aa18.47■□□□□ 0.55
GARNL3-208ENST00000444677 ZCRB1Q8TBF4 217 aaKnown RBP18.46■□□□□ 0.55
GARNL3-208ENST00000444677 TATP17735 454 aaPredicted RBP18.45■□□□□ 0.54
GARNL3-208ENST00000444677 RAPGEF4Q8WZA2 1011 aa18.45■□□□□ 0.54
GARNL3-208ENST00000444677 BCL11BQ9C0K0 894 aaPredicted RBP18.45■□□□□ 0.54
GARNL3-208ENST00000444677 LRP5O75197 1615 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms