RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 CHRNA2Q15822 529 aa14.32□□□□□ -0.12
HLA-DQB1-206ENST00000443574 CAMTA1Q9Y6Y1 1673 aa14.32□□□□□ -0.12
HLA-DQB1-206ENST00000443574 COL5A2P05997 1499 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQB1-206ENST00000443574 NME9Q86XW9 330 aa14.31□□□□□ -0.12
HLA-DQB1-206ENST00000443574 AATKQ6ZMQ8 1374 aa14.31□□□□□ -0.12
HLA-DQB1-206ENST00000443574 NSD3Q9BZ95 1437 aa14.31□□□□□ -0.12
HLA-DQB1-206ENST00000443574 THSD7AQ9UPZ6 1657 aa14.3□□□□□ -0.12
HLA-DQB1-206ENST00000443574 SOX12O15370 315 aa14.3□□□□□ -0.12
HLA-DQB1-206ENST00000443574 COG3Q96JB2 828 aa14.3□□□□□ -0.12
HLA-DQB1-206ENST00000443574 EVA1CP58658 441 aa14.29□□□□□ -0.12
HLA-DQB1-206ENST00000443574 STRN4Q9NRL3 753 aa14.29□□□□□ -0.12
HLA-DQB1-206ENST00000443574 A0A0G2JS52 829 aa14.28□□□□□ -0.12
HLA-DQB1-206ENST00000443574 MYT1Q01538 1121 aa14.28□□□□□ -0.12
HLA-DQB1-206ENST00000443574 PARP4Q9UKK3 1724 aaKnown RBP14.28□□□□□ -0.12
HLA-DQB1-206ENST00000443574 CRB1P82279 1406 aa14.27□□□□□ -0.12
HLA-DQB1-206ENST00000443574 BLMP54132 1417 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQB1-206ENST00000443574 CGNL1Q0VF96 1302 aa14.26□□□□□ -0.13
HLA-DQB1-206ENST00000443574 SPATA31A5Q5VU36 1347 aa14.26□□□□□ -0.13
HLA-DQB1-206ENST00000443574 SPATA31A7Q8IWB4 1347 aa14.26□□□□□ -0.13
HLA-DQB1-206ENST00000443574 ARHGEF25Q86VW2 580 aa14.26□□□□□ -0.13
HLA-DQB1-206ENST00000443574 SLC4A2P04920 1241 aa14.25□□□□□ -0.13
HLA-DQB1-206ENST00000443574 ZRANB1Q9UGI0 708 aa14.25□□□□□ -0.13
HLA-DQB1-206ENST00000443574 MAP2P11137 1827 aaKnown RBP14.25□□□□□ -0.13
HLA-DQB1-206ENST00000443574 RTL1A6NKG5 1358 aa14.24□□□□□ -0.13
HLA-DQB1-206ENST00000443574 SPATA31A1Q5TZJ5 1347 aa14.24□□□□□ -0.13
HLA-DQB1-206ENST00000443574 NSD2O96028 1365 aa14.23□□□□□ -0.13
HLA-DQB1-206ENST00000443574 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
HLA-DQB1-206ENST00000443574 KIF7Q2M1P5 1343 aa14.23□□□□□ -0.13
HLA-DQB1-206ENST00000443574 WDR17Q8IZU2 1322 aa14.23□□□□□ -0.13
HLA-DQB1-206ENST00000443574 FAM98CQ17RN3 349 aaKnown RBP14.23□□□□□ -0.13
HLA-DQB1-206ENST00000443574 GGNBP2Q9H3C7 697 aa14.23□□□□□ -0.13
HLA-DQB1-206ENST00000443574 RGPD1P0DJD0 1748 aa14.23□□□□□ -0.13
HLA-DQB1-206ENST00000443574 SMG6Q86US8 1419 aaKnown RBP14.23□□□□□ -0.13
HLA-DQB1-206ENST00000443574 FYB1O15117 783 aa14.22□□□□□ -0.13
HLA-DQB1-206ENST00000443574 CSB-PGBD3P0DP91 1061 aa14.22□□□□□ -0.13
HLA-DQB1-206ENST00000443574 LARP1Q6PKG0 1096 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB1-206ENST00000443574 TOM1L2Q6ZVM7 507 aa14.22□□□□□ -0.13
HLA-DQB1-206ENST00000443574 SEPT12Q8IYM1 358 aa14.22□□□□□ -0.13
HLA-DQB1-206ENST00000443574 USP35Q9P2H5 1018 aa14.22□□□□□ -0.13
HLA-DQB1-206ENST00000443574 THRAP3Q9Y2W1 955 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB1-206ENST00000443574 KIF24Q5T7B8 1368 aa14.22□□□□□ -0.13
HLA-DQB1-206ENST00000443574 TCP11L2Q8N4U5 519 aa14.21□□□□□ -0.13
HLA-DQB1-206ENST00000443574 EP400Q96L91 3159 aa14.21□□□□□ -0.14
HLA-DQB1-206ENST00000443574 CCDC7Q96M83 1385 aa14.21□□□□□ -0.14
HLA-DQB1-206ENST00000443574 ERBB3P21860 1342 aa14.2□□□□□ -0.14
HLA-DQB1-206ENST00000443574 ONECUT3O60422 494 aaPredicted RBP14.2□□□□□ -0.14
HLA-DQB1-206ENST00000443574 BARGINQ6ZT62 677 aa14.2□□□□□ -0.14
HLA-DQB1-206ENST00000443574 CARD14Q9BXL6 1004 aa14.2□□□□□ -0.14
HLA-DQB1-206ENST00000443574 RGPD2P0DJD1 1756 aa14.19□□□□□ -0.14
HLA-DQB1-206ENST00000443574 PEAK1Q9H792 1746 aa14.19□□□□□ -0.14
HLA-DQB1-206ENST00000443574 AMPHP49418 695 aa14.19□□□□□ -0.14
HLA-DQB1-206ENST00000443574 KRT27Q7Z3Y8 459 aa14.19□□□□□ -0.14
HLA-DQB1-206ENST00000443574 PANK3Q9H999 370 aa14.19□□□□□ -0.14
HLA-DQB1-206ENST00000443574 KNSTRNQ9Y448 316 aa14.19□□□□□ -0.14
HLA-DQB1-206ENST00000443574 FLT4P35916 1363 aa14.19□□□□□ -0.14
HLA-DQB1-206ENST00000443574 MAP3K19Q56UN5 1328 aa14.18□□□□□ -0.14
HLA-DQB1-206ENST00000443574 C11orf95C9JLR9 678 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-206ENST00000443574 ZEB1P37275 1124 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-206ENST00000443574 CDCA7Q9BWT1 371 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-206ENST00000443574 AXIN2Q9Y2T1 843 aa14.18□□□□□ -0.14
HLA-DQB1-206ENST00000443574 IP6K1Q92551 441 aa14.17□□□□□ -0.14
HLA-DQB1-206ENST00000443574 ANKRD24Q8TF21 1146 aa14.16□□□□□ -0.14
HLA-DQB1-206ENST00000443574 CARD10Q9BWT7 1032 aa14.16□□□□□ -0.14
HLA-DQB1-206ENST00000443574 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
HLA-DQB1-206ENST00000443574 TNS1Q9HBL0 1735 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB1-206ENST00000443574 HOXC9P31274 260 aa14.15□□□□□ -0.14
HLA-DQB1-206ENST00000443574 PDE3BQ13370 1112 aa14.15□□□□□ -0.14
HLA-DQB1-206ENST00000443574 UPF1Q92900 1129 aaKnown RBP eCLIP14.15□□□□□ -0.14
HLA-DQB1-206ENST00000443574 WASHC2AQ641Q2 1341 aa14.15□□□□□ -0.15
HLA-DQB1-206ENST00000443574 RRS1Q15050 365 aaKnown RBP14.14□□□□□ -0.15
HLA-DQB1-206ENST00000443574 NLRP2Q9NX02 1062 aa14.14□□□□□ -0.15
HLA-DQB1-206ENST00000443574 OVOS2A0A0G2JMS6 1433 aa14.14□□□□□ -0.15
HLA-DQB1-206ENST00000443574 TNS2Q63HR2 1409 aa14.14□□□□□ -0.15
HLA-DQB1-206ENST00000443574 SBF2Q86WG5 1849 aa14.13□□□□□ -0.15
HLA-DQB1-206ENST00000443574 INSRP06213 1382 aa14.13□□□□□ -0.15
HLA-DQB1-206ENST00000443574 SF3B2Q13435 895 aaKnown RBP14.13□□□□□ -0.15
HLA-DQB1-206ENST00000443574 CCDC125Q86Z20 511 aa14.13□□□□□ -0.15
HLA-DQB1-206ENST00000443574 DISP2A7MBM2 1401 aa14.13□□□□□ -0.15
HLA-DQB1-206ENST00000443574 DDB1Q16531 1140 aa14.12□□□□□ -0.15
HLA-DQB1-206ENST00000443574 LTV1Q96GA3 475 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQB1-206ENST00000443574 MORC1Q86VD1 984 aa14.11□□□□□ -0.15
HLA-DQB1-206ENST00000443574 PPM1GO15355 546 aaPredicted RBP14.1□□□□□ -0.15
HLA-DQB1-206ENST00000443574 FAM196AQ6ZSG2 479 aa14.1□□□□□ -0.15
HLA-DQB1-206ENST00000443574 NPC1L1Q9UHC9 1359 aa14.09□□□□□ -0.15
HLA-DQB1-206ENST00000443574 RGPD3A6NKT7 1758 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB1-206ENST00000443574 RGPD4Q7Z3J3 1758 aa14.09□□□□□ -0.15
HLA-DQB1-206ENST00000443574 IL2RBP14784 551 aa14.09□□□□□ -0.15
HLA-DQB1-206ENST00000443574 FBLN1P23142 703 aa14.09□□□□□ -0.15
HLA-DQB1-206ENST00000443574 TNNT2P45379 298 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB1-206ENST00000443574 EMILIN1Q9Y6C2 1016 aa14.09□□□□□ -0.15
HLA-DQB1-206ENST00000443574 SHANK3Q9BYB0 1731 aa14.09□□□□□ -0.15
HLA-DQB1-206ENST00000443574 NHSQ6T4R5 1651 aa14.08□□□□□ -0.16
HLA-DQB1-206ENST00000443574 PKD1L3Q7Z443 1732 aa14.08□□□□□ -0.16
HLA-DQB1-206ENST00000443574 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
HLA-DQB1-206ENST00000443574 KAT6BQ8WYB5 2073 aa14.07□□□□□ -0.16
HLA-DQB1-206ENST00000443574 AMER1Q5JTC6 1135 aaPredicted RBP14.07□□□□□ -0.16
HLA-DQB1-206ENST00000443574 EXOC5O00471 708 aa14.06□□□□□ -0.16
HLA-DQB1-206ENST00000443574 HSP90AB2PQ58FF8 381 aa14.06□□□□□ -0.16
HLA-DQB1-206ENST00000443574 U3KPZ7 1027 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQB1-206ENST00000443574 DOT1LQ8TEK3 1739 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms