RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 OVOS2Q6IE36 1432 aa12□□□□□ -0.49
TOP3B-209ENST00000442653 PTF1AQ7RTS3 328 aa11.99□□□□□ -0.49
TOP3B-209ENST00000442653 ROCK2O75116 1388 aaKnown RBP11.99□□□□□ -0.49
TOP3B-209ENST00000442653 WNK3Q9BYP7 1800 aa11.98□□□□□ -0.49
TOP3B-209ENST00000442653 AKAP12Q02952 1782 aa11.98□□□□□ -0.49
TOP3B-209ENST00000442653 TTC21BQ7Z4L5 1316 aa11.98□□□□□ -0.49
TOP3B-209ENST00000442653 WDR17Q8IZU2 1322 aa11.98□□□□□ -0.49
TOP3B-209ENST00000442653 TOM1L2Q6ZVM7 507 aa11.98□□□□□ -0.49
TOP3B-209ENST00000442653 ARHGEF25Q86VW2 580 aa11.98□□□□□ -0.49
TOP3B-209ENST00000442653 SBF2Q86WG5 1849 aa11.97□□□□□ -0.49
TOP3B-209ENST00000442653 NFAT5O94916 1531 aa11.97□□□□□ -0.49
TOP3B-209ENST00000442653 SOX12O15370 315 aa11.97□□□□□ -0.49
TOP3B-209ENST00000442653 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
TOP3B-209ENST00000442653 DDB1Q16531 1140 aa11.97□□□□□ -0.49
TOP3B-209ENST00000442653 NBPF14Q5TI25 921 aa11.96□□□□□ -0.49
TOP3B-209ENST00000442653 MARCH10Q8NA82 808 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-209ENST00000442653 RGPD3A6NKT7 1758 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-209ENST00000442653 RGPD4Q7Z3J3 1758 aa11.96□□□□□ -0.49
TOP3B-209ENST00000442653 RGPD5Q99666 1765 aa11.96□□□□□ -0.49
TOP3B-209ENST00000442653 C11orf95C9JLR9 678 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-209ENST00000442653 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-209ENST00000442653 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-209ENST00000442653 UTRNP46939 3433 aa11.95□□□□□ -0.5
TOP3B-209ENST00000442653 MON2Q7Z3U7 1717 aa11.94□□□□□ -0.5
TOP3B-209ENST00000442653 KTN1Q86UP2 1357 aaKnown RBP11.94□□□□□ -0.5
TOP3B-209ENST00000442653 TTC21AQ8NDW8 1320 aa11.94□□□□□ -0.5
TOP3B-209ENST00000442653 PLSCR1O15162 318 aa11.94□□□□□ -0.5
TOP3B-209ENST00000442653 KCNH5Q8NCM2 988 aa11.94□□□□□ -0.5
TOP3B-209ENST00000442653 CARD10Q9BWT7 1032 aa11.94□□□□□ -0.5
TOP3B-209ENST00000442653 BCL11BQ9C0K0 894 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-209ENST00000442653 RNF216Q9NWF9 866 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-209ENST00000442653 BCL9O00512 1426 aa11.94□□□□□ -0.5
TOP3B-209ENST00000442653 CSB-PGBD3P0DP91 1061 aa11.93□□□□□ -0.5
TOP3B-209ENST00000442653 PROM2Q8N271 834 aa11.93□□□□□ -0.5
TOP3B-209ENST00000442653 CDCA7Q9BWT1 371 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-209ENST00000442653 PDGFDQ9GZP0 370 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-209ENST00000442653 CD163L1Q9NR16 1453 aa11.93□□□□□ -0.5
TOP3B-209ENST00000442653 SBNO2Q9Y2G9 1366 aa11.92□□□□□ -0.5
TOP3B-209ENST00000442653 HOXD11P31277 338 aaPredicted RBP11.92□□□□□ -0.5
TOP3B-209ENST00000442653 SPON1Q9HCB6 807 aa11.92□□□□□ -0.5
TOP3B-209ENST00000442653 CASZ1Q86V15 1759 aa11.92□□□□□ -0.5
TOP3B-209ENST00000442653 ABCC6O95255 1503 aa11.91□□□□□ -0.5
TOP3B-209ENST00000442653 KCNQ2O43526 872 aa11.91□□□□□ -0.5
TOP3B-209ENST00000442653 NME9Q86XW9 330 aa11.91□□□□□ -0.5
TOP3B-209ENST00000442653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.91□□□□□ -0.5
TOP3B-209ENST00000442653 USP54Q70EL1 1684 aa11.91□□□□□ -0.5
TOP3B-209ENST00000442653 TNS2Q63HR2 1409 aa11.9□□□□□ -0.5
TOP3B-209ENST00000442653 USP31Q70CQ4 1352 aa11.9□□□□□ -0.5
TOP3B-209ENST00000442653 CCDC7Q96M83 1385 aa11.9□□□□□ -0.5
TOP3B-209ENST00000442653 PPP1R1BQ9UD71 204 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-209ENST00000442653 ERBB3P21860 1342 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 LTN1O94822 1766 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 EXOC5O00471 708 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 CARD11Q9BXL7 1154 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 SLC12A5Q9H2X9 1139 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 NINLQ9Y2I6 1382 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 GOLGB1Q14789 3259 aaKnown RBP11.87□□□□□ -0.51
TOP3B-209ENST00000442653 ZBTB7AO95365 584 aa11.87□□□□□ -0.51
TOP3B-209ENST00000442653 TMC1Q8TDI8 760 aa11.87□□□□□ -0.51
TOP3B-209ENST00000442653 NLRP2Q9NX02 1062 aa11.87□□□□□ -0.51
TOP3B-209ENST00000442653 NHSQ6T4R5 1651 aa11.87□□□□□ -0.51
TOP3B-209ENST00000442653 EDC4Q6P2E9 1401 aaKnown RBP11.86□□□□□ -0.51
TOP3B-209ENST00000442653 PTGER2P43116 358 aa11.86□□□□□ -0.51
TOP3B-209ENST00000442653 A0A1W2PP64 1363 aa11.86□□□□□ -0.51
TOP3B-209ENST00000442653 MYOM1P52179 1685 aa11.86□□□□□ -0.51
TOP3B-209ENST00000442653 YY1P25490 414 aa11.85□□□□□ -0.51
TOP3B-209ENST00000442653 ACSBG1Q96GR2 724 aa11.85□□□□□ -0.51
TOP3B-209ENST00000442653 IL2RBP14784 551 aa11.84□□□□□ -0.51
TOP3B-209ENST00000442653 SLC15A2Q16348 729 aa11.84□□□□□ -0.51
TOP3B-209ENST00000442653 HDGFL2Q7Z4V5 671 aaPredicted RBP11.84□□□□□ -0.51
TOP3B-209ENST00000442653 ANKRD24Q8TF21 1146 aa11.84□□□□□ -0.51
TOP3B-209ENST00000442653 STK32BQ9NY57 414 aa11.84□□□□□ -0.51
TOP3B-209ENST00000442653 ATF5Q9Y2D1 282 aaPredicted RBP11.84□□□□□ -0.51
TOP3B-209ENST00000442653 PAPPAQ13219 1627 aa11.83□□□□□ -0.52
TOP3B-209ENST00000442653 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
TOP3B-209ENST00000442653 BTAF1O14981 1849 aa11.83□□□□□ -0.52
TOP3B-209ENST00000442653 TONSLQ96HA7 1378 aa11.82□□□□□ -0.52
TOP3B-209ENST00000442653 TESK2Q96S53 571 aa11.82□□□□□ -0.52
TOP3B-209ENST00000442653 SGIP1Q9BQI5 828 aa11.81□□□□□ -0.52
TOP3B-209ENST00000442653 ZNF827Q17R98 1081 aa11.8□□□□□ -0.52
TOP3B-209ENST00000442653 IP6K1Q92551 441 aa11.8□□□□□ -0.52
TOP3B-209ENST00000442653 LTV1Q96GA3 475 aaPredicted RBP11.8□□□□□ -0.52
TOP3B-209ENST00000442653 PUS7Q96PZ0 661 aaKnown RBP11.8□□□□□ -0.52
TOP3B-209ENST00000442653 MTFR1LQ9H019 292 aa11.8□□□□□ -0.52
TOP3B-209ENST00000442653 LRRC4BQ9NT99 713 aa11.8□□□□□ -0.52
TOP3B-209ENST00000442653 ST20-MTHFSA0A0A6YYL1 179 aa11.79□□□□□ -0.52
TOP3B-209ENST00000442653 FBLN1P23142 703 aa11.79□□□□□ -0.52
TOP3B-209ENST00000442653 FHDC1Q9C0D6 1143 aaPredicted RBP11.79□□□□□ -0.52
TOP3B-209ENST00000442653 MAP3K19Q56UN5 1328 aa11.79□□□□□ -0.52
TOP3B-209ENST00000442653 KAT6BQ8WYB5 2073 aa11.79□□□□□ -0.52
TOP3B-209ENST00000442653 FAM208AQ9UK61 1670 aaKnown RBP11.78□□□□□ -0.52
TOP3B-209ENST00000442653 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
TOP3B-209ENST00000442653 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
TOP3B-209ENST00000442653 SYT17Q9BSW7 474 aa11.78□□□□□ -0.52
TOP3B-209ENST00000442653 HOXC9P31274 260 aa11.77□□□□□ -0.53
TOP3B-209ENST00000442653 RGPD2P0DJD1 1756 aa11.77□□□□□ -0.53
TOP3B-209ENST00000442653 MEGF6O75095 1541 aa11.76□□□□□ -0.53
TOP3B-209ENST00000442653 COG3Q96JB2 828 aa11.76□□□□□ -0.53
TOP3B-209ENST00000442653 SHANK3Q9BYB0 1731 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms