RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 TERF2IPQ9NYB0 399 aa23.39■■□□□ 1.33
IRF3-204ENST00000442265 ABCC6O95255 1503 aa23.38■■□□□ 1.33
IRF3-204ENST00000442265 WDR17Q8IZU2 1322 aa23.38■■□□□ 1.33
IRF3-204ENST00000442265 PDE3BQ13370 1112 aa23.38■■□□□ 1.33
IRF3-204ENST00000442265 RGPD1P0DJD0 1748 aa23.38■■□□□ 1.33
IRF3-204ENST00000442265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.37■■□□□ 1.33
IRF3-204ENST00000442265 A0A1W2PP64 1363 aa23.37■■□□□ 1.33
IRF3-204ENST00000442265 ZBTB7CA1YPR0 619 aa23.36■■□□□ 1.33
IRF3-204ENST00000442265 PARP4Q9UKK3 1724 aaKnown RBP23.36■■□□□ 1.33
IRF3-204ENST00000442265 C11orf95C9JLR9 678 aaPredicted RBP23.35■■□□□ 1.33
IRF3-204ENST00000442265 NME9Q86XW9 330 aa23.35■■□□□ 1.33
IRF3-204ENST00000442265 TOM1L2Q6ZVM7 507 aa23.34■■□□□ 1.33
IRF3-204ENST00000442265 CARD10Q9BWT7 1032 aa23.33■■□□□ 1.33
IRF3-204ENST00000442265 TNS1Q9HBL0 1735 aaKnown RBP23.33■■□□□ 1.32
IRF3-204ENST00000442265 USP47Q96K76 1375 aa23.32■■□□□ 1.32
IRF3-204ENST00000442265 TRIM37O94972 964 aa23.32■■□□□ 1.32
IRF3-204ENST00000442265 EN1Q05925 392 aaPredicted RBP23.32■■□□□ 1.32
IRF3-204ENST00000442265 CDCA7Q9BWT1 371 aaPredicted RBP23.32■■□□□ 1.32
IRF3-204ENST00000442265 SOX12O15370 315 aa23.31■■□□□ 1.32
IRF3-204ENST00000442265 OVOS2A0A0J9YW53 1432 aa23.31■■□□□ 1.32
IRF3-204ENST00000442265 OVOS2Q6IE36 1432 aa23.31■■□□□ 1.32
IRF3-204ENST00000442265 PARD3Q8TEW0 1356 aa23.3■■□□□ 1.32
IRF3-204ENST00000442265 CAMKK2Q96RR4 588 aa23.3■■□□□ 1.32
IRF3-204ENST00000442265 TMF1P82094 1093 aa23.28■■□□□ 1.32
IRF3-204ENST00000442265 DDB1Q16531 1140 aa23.27■■□□□ 1.32
IRF3-204ENST00000442265 ANKRD36BQ8N2N9 1353 aa23.27■■□□□ 1.31
IRF3-204ENST00000442265 CCDC7Q96M83 1385 aa23.27■■□□□ 1.31
IRF3-204ENST00000442265 OVOS2A0A0G2JMS6 1433 aa23.26■■□□□ 1.31
IRF3-204ENST00000442265 PEAK1Q9H792 1746 aa23.26■■□□□ 1.31
IRF3-204ENST00000442265 APBA3O96018 575 aa23.26■■□□□ 1.31
IRF3-204ENST00000442265 LRRC37A3O60309 1634 aa23.26■■□□□ 1.31
IRF3-204ENST00000442265 BCL9O00512 1426 aa23.25■■□□□ 1.31
IRF3-204ENST00000442265 CSB-PGBD3P0DP91 1061 aa23.25■■□□□ 1.31
IRF3-204ENST00000442265 EZH2Q15910 746 aaKnown RBP23.25■■□□□ 1.31
IRF3-204ENST00000442265 ERBB3P21860 1342 aa23.25■■□□□ 1.31
IRF3-204ENST00000442265 RGPD5Q99666 1765 aa23.24■■□□□ 1.31
IRF3-204ENST00000442265 CDCA8Q53HL2 280 aa23.23■■□□□ 1.31
IRF3-204ENST00000442265 PCGF6Q9BYE7 350 aa23.23■■□□□ 1.31
IRF3-204ENST00000442265 WNK3Q9BYP7 1800 aa23.22■■□□□ 1.31
IRF3-204ENST00000442265 MARCH10Q8NA82 808 aaPredicted RBP23.21■■□□□ 1.31
IRF3-204ENST00000442265 IP6K1Q92551 441 aa23.19■■□□□ 1.3
IRF3-204ENST00000442265 COG3Q96JB2 828 aa23.19■■□□□ 1.3
IRF3-204ENST00000442265 EXOC5O00471 708 aa23.18■■□□□ 1.3
IRF3-204ENST00000442265 ANKRD24Q8TF21 1146 aa23.18■■□□□ 1.3
IRF3-204ENST00000442265 LTN1O94822 1766 aa23.18■■□□□ 1.3
IRF3-204ENST00000442265 PSDA5PKW4 1024 aaPredicted RBP23.17■■□□□ 1.3
IRF3-204ENST00000442265 BCL11BQ9C0K0 894 aaPredicted RBP23.17■■□□□ 1.3
IRF3-204ENST00000442265 RREB1Q92766 1687 aa23.16■■□□□ 1.3
IRF3-204ENST00000442265 FYB1O15117 783 aa23.16■■□□□ 1.3
IRF3-204ENST00000442265 PLSCR1O15162 318 aa23.16■■□□□ 1.3
IRF3-204ENST00000442265 NLRP2Q9NX02 1062 aa23.16■■□□□ 1.3
IRF3-204ENST00000442265 TNS2Q63HR2 1409 aa23.16■■□□□ 1.3
IRF3-204ENST00000442265 LRP5O75197 1615 aa23.15■■□□□ 1.3
IRF3-204ENST00000442265 R3HDM1Q15032 1099 aaKnown RBP23.14■■□□□ 1.29
IRF3-204ENST00000442265 MAP3K19Q56UN5 1328 aa23.13■■□□□ 1.29
IRF3-204ENST00000442265 SBF2Q86WG5 1849 aa23.12■■□□□ 1.29
IRF3-204ENST00000442265 IL2RBP14784 551 aa23.12■■□□□ 1.29
IRF3-204ENST00000442265 RGPD3A6NKT7 1758 aaPredicted RBP23.12■■□□□ 1.29
IRF3-204ENST00000442265 RGPD4Q7Z3J3 1758 aa23.12■■□□□ 1.29
IRF3-204ENST00000442265 HOXC9P31274 260 aa23.11■■□□□ 1.29
IRF3-204ENST00000442265 PTF1AQ7RTS3 328 aa23.1■■□□□ 1.29
IRF3-204ENST00000442265 RTL1A6NKG5 1358 aa23.1■■□□□ 1.29
IRF3-204ENST00000442265 NUP188Q5SRE5 1749 aa23.1■■□□□ 1.29
IRF3-204ENST00000442265 CARD14Q9BXL6 1004 aa23.09■■□□□ 1.29
IRF3-204ENST00000442265 FBLN1P23142 703 aa23.08■■□□□ 1.29
IRF3-204ENST00000442265 NBPF14Q5TI25 921 aa23.08■■□□□ 1.29
IRF3-204ENST00000442265 GGNBP2Q9H3C7 697 aa23.08■■□□□ 1.29
IRF3-204ENST00000442265 FAM208AQ9UK61 1670 aaKnown RBP23.07■■□□□ 1.28
IRF3-204ENST00000442265 MYOM1P52179 1685 aa23.06■■□□□ 1.28
IRF3-204ENST00000442265 AMPHP49418 695 aa23.06■■□□□ 1.28
IRF3-204ENST00000442265 CCER1Q8TC90 406 aaPredicted RBP23.06■■□□□ 1.28
IRF3-204ENST00000442265 KIF24Q5T7B8 1368 aa23.05■■□□□ 1.28
IRF3-204ENST00000442265 PROM2Q8N271 834 aa23.05■■□□□ 1.28
IRF3-204ENST00000442265 RRS1Q15050 365 aaKnown RBP23.03■■□□□ 1.28
IRF3-204ENST00000442265 KCNQ2O43526 872 aa23.02■■□□□ 1.28
IRF3-204ENST00000442265 LTV1Q96GA3 475 aaPredicted RBP23.02■■□□□ 1.28
IRF3-204ENST00000442265 NSD3Q9BZ95 1437 aa23.01■■□□□ 1.27
IRF3-204ENST00000442265 EIF4G2P78344 907 aaKnown RBP eCLIP23.01■■□□□ 1.27
IRF3-204ENST00000442265 NHSQ6T4R5 1651 aa23■■□□□ 1.27
IRF3-204ENST00000442265 INSRP06213 1382 aa23■■□□□ 1.27
IRF3-204ENST00000442265 KIF20BQ96Q89 1820 aa22.98■■□□□ 1.27
IRF3-204ENST00000442265 TXNRD1Q16881 649 aa22.98■■□□□ 1.27
IRF3-204ENST00000442265 NBPF6Q5VWK0 638 aa22.98■■□□□ 1.27
IRF3-204ENST00000442265 NBPF4Q96M43 638 aa22.98■■□□□ 1.27
IRF3-204ENST00000442265 FLT4P35916 1363 aa22.98■■□□□ 1.27
IRF3-204ENST00000442265 HSPA5P11021 654 aaKnown RBP22.97■■□□□ 1.27
IRF3-204ENST00000442265 ANO8Q9HCE9 1232 aaPredicted RBP22.97■■□□□ 1.27
IRF3-204ENST00000442265 HSP90AB2PQ58FF8 381 aa22.96■■□□□ 1.27
IRF3-204ENST00000442265 CGNL1Q0VF96 1302 aa22.96■■□□□ 1.27
IRF3-204ENST00000442265 SMG6Q86US8 1419 aaKnown RBP22.95■■□□□ 1.26
IRF3-204ENST00000442265 ACSBG1Q96GR2 724 aa22.95■■□□□ 1.26
IRF3-204ENST00000442265 MEGF6O75095 1541 aa22.94■■□□□ 1.26
IRF3-204ENST00000442265 ZCRB1Q8TBF4 217 aaKnown RBP22.94■■□□□ 1.26
IRF3-204ENST00000442265 DDX54Q8TDD1 881 aaKnown RBP22.93■■□□□ 1.26
IRF3-204ENST00000442265 EMILIN1Q9Y6C2 1016 aa22.91■■□□□ 1.26
IRF3-204ENST00000442265 SPON1Q9HCB6 807 aa22.9■■□□□ 1.26
IRF3-204ENST00000442265 RGPD2P0DJD1 1756 aa22.9■■□□□ 1.26
IRF3-204ENST00000442265 WASHC2AQ641Q2 1341 aa22.89■■□□□ 1.26
IRF3-204ENST00000442265 ANKRD26Q9UPS8 1709 aa22.89■■□□□ 1.26
IRF3-204ENST00000442265 SLC15A2Q16348 729 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms