RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 COL22A1Q8NFW1 1626 aaPredicted RBP21.13■□□□□ 0.97
MCF2L-217ENST00000441756 U2AF1L5P0DN76 240 aaPredicted RBP21.12■□□□□ 0.97
MCF2L-217ENST00000441756 HOXC9P31274 260 aa21.12■□□□□ 0.97
MCF2L-217ENST00000441756 U2AF1Q01081 240 aaKnown RBP eCLIP21.12■□□□□ 0.97
MCF2L-217ENST00000441756 CPDO75976 1380 aa21.11■□□□□ 0.97
MCF2L-217ENST00000441756 IP6K1Q92551 441 aa21.11■□□□□ 0.97
MCF2L-217ENST00000441756 PLEKHG5O94827 1062 aa21.1■□□□□ 0.97
MCF2L-217ENST00000441756 IL13P35225 146 aa21.1■□□□□ 0.97
MCF2L-217ENST00000441756 ZBTB7CA1YPR0 619 aa21.09■□□□□ 0.97
MCF2L-217ENST00000441756 EIF4A2Q14240 407 aaKnown RBP21.09■□□□□ 0.97
MCF2L-217ENST00000441756 HSP90AB2PQ58FF8 381 aa21.09■□□□□ 0.97
MCF2L-217ENST00000441756 NEFMP07197 916 aa21.08■□□□□ 0.97
MCF2L-217ENST00000441756 CENPBP07199 599 aaPredicted RBP21.08■□□□□ 0.97
MCF2L-217ENST00000441756 ZC3H6P61129 1189 aaKnown RBP21.07■□□□□ 0.96
MCF2L-217ENST00000441756 NGEFQ8N5V2 710 aa21.07■□□□□ 0.96
MCF2L-217ENST00000441756 CABLES1Q8TDN4 633 aa21.07■□□□□ 0.96
MCF2L-217ENST00000441756 RGPD1P0DJD0 1748 aa21.07■□□□□ 0.96
MCF2L-217ENST00000441756 FCHSD2O94868 740 aa21.06■□□□□ 0.96
MCF2L-217ENST00000441756 RUNDC1Q96C34 613 aa21.06■□□□□ 0.96
MCF2L-217ENST00000441756 ZBED9Q6R2W3 1325 aa21.05■□□□□ 0.96
MCF2L-217ENST00000441756 KIAA0232Q92628 1395 aa21.05■□□□□ 0.96
MCF2L-217ENST00000441756 MAPK8IP3Q9UPT6 1336 aa21.04■□□□□ 0.96
MCF2L-217ENST00000441756 PRDM11Q9NQV5 511 aa21.03■□□□□ 0.96
MCF2L-217ENST00000441756 FAM208AQ9UK61 1670 aaKnown RBP21.02■□□□□ 0.96
MCF2L-217ENST00000441756 COL18A1P39060 1754 aa21.02■□□□□ 0.96
MCF2L-217ENST00000441756 IGSF1Q8N6C5 1336 aa21.02■□□□□ 0.95
MCF2L-217ENST00000441756 JCADQ9P266 1359 aa21.01■□□□□ 0.95
MCF2L-217ENST00000441756 CCDC146Q8IYE0 955 aa21.01■□□□□ 0.95
MCF2L-217ENST00000441756 RSPH6AQ9H0K4 717 aa21■□□□□ 0.95
MCF2L-217ENST00000441756 ANKRD24Q8TF21 1146 aa20.99■□□□□ 0.95
MCF2L-217ENST00000441756 LTV1Q96GA3 475 aaPredicted RBP20.99■□□□□ 0.95
MCF2L-217ENST00000441756 LMO7Q8WWI1 1683 aa20.99■□□□□ 0.95
MCF2L-217ENST00000441756 KDRP35968 1356 aa20.98■□□□□ 0.95
MCF2L-217ENST00000441756 COL14A1Q05707 1796 aaKnown RBP20.98■□□□□ 0.95
MCF2L-217ENST00000441756 PRKAR2BP31323 418 aa20.98■□□□□ 0.95
MCF2L-217ENST00000441756 NCBP3Q53F19 620 aaKnown RBP20.98■□□□□ 0.95
MCF2L-217ENST00000441756 CAMTA1Q9Y6Y1 1673 aa20.98■□□□□ 0.95
MCF2L-217ENST00000441756 ERBB3P21860 1342 aa20.98■□□□□ 0.95
MCF2L-217ENST00000441756 HMOX1P09601 288 aa20.97■□□□□ 0.95
MCF2L-217ENST00000441756 SULT6B1Q6IMI4 303 aa20.97■□□□□ 0.95
MCF2L-217ENST00000441756 PLEKHF1Q96S99 279 aa20.97■□□□□ 0.95
MCF2L-217ENST00000441756 APAF1O14727 1248 aa20.96■□□□□ 0.95
MCF2L-217ENST00000441756 CHRNA2Q15822 529 aa20.96■□□□□ 0.95
MCF2L-217ENST00000441756 EYA1Q99502 592 aa20.96■□□□□ 0.95
MCF2L-217ENST00000441756 RGPD5Q99666 1765 aa20.95■□□□□ 0.94
MCF2L-217ENST00000441756 TCP11L2Q8N4U5 519 aa20.95■□□□□ 0.94
MCF2L-217ENST00000441756 AXIN2Q9Y2T1 843 aa20.94■□□□□ 0.94
MCF2L-217ENST00000441756 NCAPD2Q15021 1401 aa20.94■□□□□ 0.94
MCF2L-217ENST00000441756 CSB-PGBD3P0DP91 1061 aa20.93■□□□□ 0.94
MCF2L-217ENST00000441756 SPATA31A6Q5VVP1 1343 aa20.93■□□□□ 0.94
MCF2L-217ENST00000441756 PDE3BQ13370 1112 aa20.92■□□□□ 0.94
MCF2L-217ENST00000441756 COL5A2P05997 1499 aaPredicted RBP20.92■□□□□ 0.94
MCF2L-217ENST00000441756 AEBP1Q8IUX7 1158 aa20.91■□□□□ 0.94
MCF2L-217ENST00000441756 PLEKHG2Q9H7P9 1386 aa20.91■□□□□ 0.94
MCF2L-217ENST00000441756 WDR17Q8IZU2 1322 aa20.9■□□□□ 0.94
MCF2L-217ENST00000441756 CCDC27Q2M243 656 aa20.9■□□□□ 0.94
MCF2L-217ENST00000441756 TMPOP42166 694 aaKnown RBP20.89■□□□□ 0.93
MCF2L-217ENST00000441756 LMOD3Q0VAK6 560 aa20.89■□□□□ 0.93
MCF2L-217ENST00000441756 NFE2L2Q16236 605 aa20.89■□□□□ 0.93
MCF2L-217ENST00000441756 NBPF6Q5VWK0 638 aa20.89■□□□□ 0.93
MCF2L-217ENST00000441756 NBPF4Q96M43 638 aa20.89■□□□□ 0.93
MCF2L-217ENST00000441756 NLRP2Q9NX02 1062 aa20.89■□□□□ 0.93
MCF2L-217ENST00000441756 SALL2Q9Y467 1007 aaPredicted RBP20.89■□□□□ 0.93
MCF2L-217ENST00000441756 RGPD2P0DJD1 1756 aa20.88■□□□□ 0.93
MCF2L-217ENST00000441756 FAM83GA6ND36 823 aa20.88■□□□□ 0.93
MCF2L-217ENST00000441756 HSPA1LP34931 641 aa20.88■□□□□ 0.93
MCF2L-217ENST00000441756 PLCH1Q4KWH8 1693 aa20.88■□□□□ 0.93
MCF2L-217ENST00000441756 NUTM2BA6NNL0 878 aaPredicted RBP20.87■□□□□ 0.93
MCF2L-217ENST00000441756 NUTM2EB1AL46 878 aaPredicted RBP20.87■□□□□ 0.93
MCF2L-217ENST00000441756 EVA1CP58658 441 aa20.87■□□□□ 0.93
MCF2L-217ENST00000441756 NUTM2AQ8IVF1 878 aaPredicted RBP20.87■□□□□ 0.93
MCF2L-217ENST00000441756 USHBP1Q8N6Y0 703 aa20.86■□□□□ 0.93
MCF2L-217ENST00000441756 GAS2L2Q8NHY3 880 aa20.86■□□□□ 0.93
MCF2L-217ENST00000441756 NWD2Q9ULI1 1742 aa20.86■□□□□ 0.93
MCF2L-217ENST00000441756 SENP3-EIF4A1A0A087X0R7 540 aa20.85■□□□□ 0.93
MCF2L-217ENST00000441756 ADAMTS2O95450 1211 aa20.85■□□□□ 0.93
MCF2L-217ENST00000441756 RIPK4P57078 832 aa20.85■□□□□ 0.93
MCF2L-217ENST00000441756 NEUROD2Q15784 382 aa20.85■□□□□ 0.93
MCF2L-217ENST00000441756 PHACTR3Q96KR7 559 aa20.85■□□□□ 0.93
MCF2L-217ENST00000441756 BTG4Q9NY30 223 aa20.85■□□□□ 0.93
MCF2L-217ENST00000441756 RRP7AQ9Y3A4 280 aaKnown RBP20.85■□□□□ 0.93
MCF2L-217ENST00000441756 ZNF521Q96K83 1311 aa20.84■□□□□ 0.93
MCF2L-217ENST00000441756 GOLGA2Q08379 1002 aa20.84■□□□□ 0.93
MCF2L-217ENST00000441756 TOM1L2Q6ZVM7 507 aa20.84■□□□□ 0.93
MCF2L-217ENST00000441756 WWC1Q8IX03 1113 aa20.84■□□□□ 0.93
MCF2L-217ENST00000441756 RAPGEF4Q8WZA2 1011 aa20.84■□□□□ 0.93
MCF2L-217ENST00000441756 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
MCF2L-217ENST00000441756 CRB1P82279 1406 aa20.84■□□□□ 0.93
MCF2L-217ENST00000441756 CALD1Q05682 793 aaKnown RBP20.83■□□□□ 0.93
MCF2L-217ENST00000441756 AMOTQ4VCS5 1084 aa20.83■□□□□ 0.93
MCF2L-217ENST00000441756 WDR63Q8IWG1 891 aa20.83■□□□□ 0.93
MCF2L-217ENST00000441756 STRN4Q9NRL3 753 aa20.83■□□□□ 0.93
MCF2L-217ENST00000441756 TATP17735 454 aaPredicted RBP20.82■□□□□ 0.92
MCF2L-217ENST00000441756 CARD10Q9BWT7 1032 aa20.82■□□□□ 0.92
MCF2L-217ENST00000441756 PARP4Q9UKK3 1724 aaKnown RBP20.81■□□□□ 0.92
MCF2L-217ENST00000441756 PLEKHO1Q53GL0 409 aaPredicted RBP20.81■□□□□ 0.92
MCF2L-217ENST00000441756 NRAPQ86VF7 1730 aa20.81■□□□□ 0.92
MCF2L-217ENST00000441756 SLIT2O94813 1529 aa20.8■□□□□ 0.92
MCF2L-217ENST00000441756 IL16Q14005 1332 aa20.79■□□□□ 0.92
MCF2L-217ENST00000441756 E9PSI1 815 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms