RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-213ENST00000439732 SPATA31A5Q5VU36 1347 aa12.99□□□□□ -0.33
SMARCA2-213ENST00000439732 SPATA31A7Q8IWB4 1347 aa12.99□□□□□ -0.33
SMARCA2-213ENST00000439732 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
SMARCA2-213ENST00000439732 ABCC6O95255 1503 aa12.98□□□□□ -0.33
SMARCA2-213ENST00000439732 CDK12Q9NYV4 1490 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-213ENST00000439732 MAP3K19Q56UN5 1328 aa12.98□□□□□ -0.33
SMARCA2-213ENST00000439732 ONECUT3O60422 494 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-213ENST00000439732 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
SMARCA2-213ENST00000439732 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-213ENST00000439732 LARP1Q6PKG0 1096 aaKnown RBP12.98□□□□□ -0.33
SMARCA2-213ENST00000439732 THRAP3Q9Y2W1 955 aaKnown RBP12.98□□□□□ -0.33
SMARCA2-213ENST00000439732 COL18A1P39060 1754 aa12.97□□□□□ -0.33
SMARCA2-213ENST00000439732 KIF24Q5T7B8 1368 aa12.97□□□□□ -0.33
SMARCA2-213ENST00000439732 SPATA31A1Q5TZJ5 1347 aa12.97□□□□□ -0.33
SMARCA2-213ENST00000439732 WDR17Q8IZU2 1322 aa12.97□□□□□ -0.33
SMARCA2-213ENST00000439732 TOM1L2Q6ZVM7 507 aa12.97□□□□□ -0.33
SMARCA2-213ENST00000439732 NPC1L1Q9UHC9 1359 aa12.96□□□□□ -0.33
SMARCA2-213ENST00000439732 LMO7Q8WWI1 1683 aa12.96□□□□□ -0.33
SMARCA2-213ENST00000439732 FBLN1P23142 703 aa12.96□□□□□ -0.33
SMARCA2-213ENST00000439732 RRS1Q15050 365 aaKnown RBP12.96□□□□□ -0.33
SMARCA2-213ENST00000439732 TCP11L2Q8N4U5 519 aa12.96□□□□□ -0.33
SMARCA2-213ENST00000439732 CARD10Q9BWT7 1032 aa12.96□□□□□ -0.33
SMARCA2-213ENST00000439732 LTN1O94822 1766 aa12.96□□□□□ -0.34
SMARCA2-213ENST00000439732 COL5A2P05997 1499 aaPredicted RBP12.96□□□□□ -0.34
SMARCA2-213ENST00000439732 NRAPQ86VF7 1730 aa12.96□□□□□ -0.34
SMARCA2-213ENST00000439732 BLMP54132 1417 aaPredicted RBP12.96□□□□□ -0.34
SMARCA2-213ENST00000439732 RTL1A6NKG5 1358 aa12.95□□□□□ -0.34
SMARCA2-213ENST00000439732 HOXC9P31274 260 aa12.95□□□□□ -0.34
SMARCA2-213ENST00000439732 TNNT2P45379 298 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-213ENST00000439732 FAM98CQ17RN3 349 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-213ENST00000439732 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
SMARCA2-213ENST00000439732 ANKRD24Q8TF21 1146 aa12.95□□□□□ -0.34
SMARCA2-213ENST00000439732 CRB1P82279 1406 aa12.95□□□□□ -0.34
SMARCA2-213ENST00000439732 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-213ENST00000439732 A0A0G2JS52 829 aa12.94□□□□□ -0.34
SMARCA2-213ENST00000439732 PPM1GO15355 546 aaPredicted RBP12.94□□□□□ -0.34
SMARCA2-213ENST00000439732 MYT1Q01538 1121 aa12.94□□□□□ -0.34
SMARCA2-213ENST00000439732 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
SMARCA2-213ENST00000439732 CDCA7Q9BWT1 371 aaPredicted RBP12.94□□□□□ -0.34
SMARCA2-213ENST00000439732 NLRP2Q9NX02 1062 aa12.94□□□□□ -0.34
SMARCA2-213ENST00000439732 USP35Q9P2H5 1018 aa12.94□□□□□ -0.34
SMARCA2-213ENST00000439732 POLKQ9UBT6 870 aa12.94□□□□□ -0.34
SMARCA2-213ENST00000439732 RGPD5Q99666 1765 aa12.94□□□□□ -0.34
SMARCA2-213ENST00000439732 FLT4P35916 1363 aa12.94□□□□□ -0.34
SMARCA2-213ENST00000439732 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
SMARCA2-213ENST00000439732 ERBB3P21860 1342 aa12.93□□□□□ -0.34
SMARCA2-213ENST00000439732 CC2D1BQ5T0F9 858 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-213ENST00000439732 GLI3P10071 1580 aa12.92□□□□□ -0.34
SMARCA2-213ENST00000439732 LTV1Q96GA3 475 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-213ENST00000439732 EMILIN1Q9Y6C2 1016 aa12.92□□□□□ -0.34
SMARCA2-213ENST00000439732 INSRP06213 1382 aa12.92□□□□□ -0.34
SMARCA2-213ENST00000439732 SMG6Q86US8 1419 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-213ENST00000439732 ZNF316A6NFI3 1004 aaPredicted RBP12.91□□□□□ -0.34
SMARCA2-213ENST00000439732 SOCS7O14512 581 aa12.91□□□□□ -0.34
SMARCA2-213ENST00000439732 DDX10Q13206 875 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-213ENST00000439732 HSP90AB2PQ58FF8 381 aa12.91□□□□□ -0.34
SMARCA2-213ENST00000439732 RGS12O14924 1447 aa12.9□□□□□ -0.34
SMARCA2-213ENST00000439732 KRT27Q7Z3Y8 459 aa12.9□□□□□ -0.34
SMARCA2-213ENST00000439732 PDE3BQ13370 1112 aa12.89□□□□□ -0.35
SMARCA2-213ENST00000439732 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
SMARCA2-213ENST00000439732 EXOC5O00471 708 aa12.87□□□□□ -0.35
SMARCA2-213ENST00000439732 IL2RBP14784 551 aa12.87□□□□□ -0.35
SMARCA2-213ENST00000439732 MTHFSP49914 203 aa12.87□□□□□ -0.35
SMARCA2-213ENST00000439732 DDB1Q16531 1140 aa12.87□□□□□ -0.35
SMARCA2-213ENST00000439732 FAM208AQ9UK61 1670 aaKnown RBP12.86□□□□□ -0.35
SMARCA2-213ENST00000439732 EP400Q96L91 3159 aa12.86□□□□□ -0.35
SMARCA2-213ENST00000439732 NBPF6Q5VWK0 638 aa12.86□□□□□ -0.35
SMARCA2-213ENST00000439732 NBPF4Q96M43 638 aa12.86□□□□□ -0.35
SMARCA2-213ENST00000439732 CCDC125Q86Z20 511 aa12.85□□□□□ -0.35
SMARCA2-213ENST00000439732 RAPGEF4Q8WZA2 1011 aa12.85□□□□□ -0.35
SMARCA2-213ENST00000439732 PEAK1Q9H792 1746 aa12.85□□□□□ -0.35
SMARCA2-213ENST00000439732 BRWD3Q6RI45 1802 aa12.84□□□□□ -0.35
SMARCA2-213ENST00000439732 EIF4A2Q14240 407 aaKnown RBP12.84□□□□□ -0.35
SMARCA2-213ENST00000439732 RALBP1Q15311 655 aa12.84□□□□□ -0.35
SMARCA2-213ENST00000439732 FAM196AQ6ZSG2 479 aa12.84□□□□□ -0.35
SMARCA2-213ENST00000439732 CFAP53Q96M91 514 aa12.84□□□□□ -0.35
SMARCA2-213ENST00000439732 THSD7AQ9UPZ6 1657 aa12.83□□□□□ -0.35
SMARCA2-213ENST00000439732 TATP17735 454 aaPredicted RBP12.83□□□□□ -0.36
SMARCA2-213ENST00000439732 EYA1Q99502 592 aa12.83□□□□□ -0.36
SMARCA2-213ENST00000439732 PARP4Q9UKK3 1724 aaKnown RBP12.82□□□□□ -0.36
SMARCA2-213ENST00000439732 DISP2A7MBM2 1401 aa12.81□□□□□ -0.36
SMARCA2-213ENST00000439732 KAT6BQ8WYB5 2073 aa12.81□□□□□ -0.36
SMARCA2-213ENST00000439732 DIAPH1O60610 1272 aaKnown RBP12.81□□□□□ -0.36
SMARCA2-213ENST00000439732 PPP2R1AP30153 589 aa12.81□□□□□ -0.36
SMARCA2-213ENST00000439732 USHBP1Q8N6Y0 703 aa12.81□□□□□ -0.36
SMARCA2-213ENST00000439732 ZCRB1Q8TBF4 217 aaKnown RBP12.81□□□□□ -0.36
SMARCA2-213ENST00000439732 UPF1Q92900 1129 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMARCA2-213ENST00000439732 RGPD2P0DJD1 1756 aa12.81□□□□□ -0.36
SMARCA2-213ENST00000439732 IL13P35225 146 aa12.8□□□□□ -0.36
SMARCA2-213ENST00000439732 SF3B2Q13435 895 aaKnown RBP12.8□□□□□ -0.36
SMARCA2-213ENST00000439732 NUDCQ9Y266 331 aa12.8□□□□□ -0.36
SMARCA2-213ENST00000439732 PARD3Q8TEW0 1356 aa12.8□□□□□ -0.36
SMARCA2-213ENST00000439732 MARCH10Q8NA82 808 aaPredicted RBP12.79□□□□□ -0.36
SMARCA2-213ENST00000439732 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMARCA2-213ENST00000439732 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
SMARCA2-213ENST00000439732 SPG7Q9UQ90 795 aa12.78□□□□□ -0.36
SMARCA2-213ENST00000439732 IGSF1Q8N6C5 1336 aa12.78□□□□□ -0.36
SMARCA2-213ENST00000439732 WNK3Q9BYP7 1800 aa12.78□□□□□ -0.36
SMARCA2-213ENST00000439732 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
SMARCA2-213ENST00000439732 FAM182BQ5T319 152 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms