RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 PTMSP20962 102 aa15.21■□□□□ 0.03
SLC38A1-202ENST00000439706 FYB1O15117 783 aa15.21■□□□□ 0.02
SLC38A1-202ENST00000439706 RILPL2Q969X0 211 aa15.21■□□□□ 0.02
SLC38A1-202ENST00000439706 CD109Q6YHK3 1445 aa15.21■□□□□ 0.02
SLC38A1-202ENST00000439706 SPDYE4A6NLX3 237 aa15.2■□□□□ 0.02
SLC38A1-202ENST00000439706 ZKSCAN5Q9Y2L8 839 aa15.2■□□□□ 0.02
SLC38A1-202ENST00000439706 VAMP4O75379 141 aa15.2■□□□□ 0.02
SLC38A1-202ENST00000439706 NECTIN2Q92692 538 aa15.2■□□□□ 0.02
SLC38A1-202ENST00000439706 MIS18AQ9NYP9 233 aa15.2■□□□□ 0.02
SLC38A1-202ENST00000439706 MYOM1P52179 1685 aa15.2■□□□□ 0.02
SLC38A1-202ENST00000439706 TRIM6-TRIM34B2RNG4 842 aa15.2■□□□□ 0.02
SLC38A1-202ENST00000439706 USP26Q9BXU7 913 aa15.19■□□□□ 0.02
SLC38A1-202ENST00000439706 CABP1Q9NZU7 370 aa15.19■□□□□ 0.02
SLC38A1-202ENST00000439706 USP25Q9UHP3 1055 aa15.19■□□□□ 0.02
SLC38A1-202ENST00000439706 ZDHHC9Q9Y397 364 aa15.19■□□□□ 0.02
SLC38A1-202ENST00000439706 CASC1Q6TDU7 716 aa15.18■□□□□ 0.02
SLC38A1-202ENST00000439706 MBIPQ9NS73 344 aa15.18■□□□□ 0.02
SLC38A1-202ENST00000439706 CFAP65Q6ZU64 1925 aaKnown RBP15.18■□□□□ 0.02
SLC38A1-202ENST00000439706 INTS3Q68E01 1043 aaKnown RBP15.18■□□□□ 0.02
SLC38A1-202ENST00000439706 SPHKAPQ2M3C7 1700 aa15.18■□□□□ 0.02
SLC38A1-202ENST00000439706 MRPL50Q8N5N7 158 aaKnown RBP15.18■□□□□ 0.02
SLC38A1-202ENST00000439706 ANO2Q9NQ90 1003 aa15.18■□□□□ 0.02
SLC38A1-202ENST00000439706 EMILIN1Q9Y6C2 1016 aa15.18■□□□□ 0.02
SLC38A1-202ENST00000439706 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.17■□□□□ 0.02
SLC38A1-202ENST00000439706 GADD45BO75293 160 aaPredicted RBP15.17■□□□□ 0.02
SLC38A1-202ENST00000439706 ZNF445P59923 1031 aa15.17■□□□□ 0.02
SLC38A1-202ENST00000439706 ZRANB1Q9UGI0 708 aa15.17■□□□□ 0.02
SLC38A1-202ENST00000439706 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.17■□□□□ 0.02
SLC38A1-202ENST00000439706 NCOA3Q9Y6Q9 1424 aa15.17■□□□□ 0.02
SLC38A1-202ENST00000439706 MAP4K4O95819 1239 aaPredicted RBP15.17■□□□□ 0.02
SLC38A1-202ENST00000439706 CT47B1P0C2W7 299 aaPredicted RBP15.17■□□□□ 0.02
SLC38A1-202ENST00000439706 ZNF518AQ6AHZ1 1483 aa15.16■□□□□ 0.02
SLC38A1-202ENST00000439706 SPC24Q8NBT2 197 aa15.16■□□□□ 0.02
SLC38A1-202ENST00000439706 PRAM1Q96QH2 718 aa15.16■□□□□ 0.02
SLC38A1-202ENST00000439706 EXOC6BQ9Y2D4 811 aa15.16■□□□□ 0.02
SLC38A1-202ENST00000439706 NUTM2FA1L443 756 aa15.16■□□□□ 0.02
SLC38A1-202ENST00000439706 RRS1Q15050 365 aaKnown RBP15.16■□□□□ 0.02
SLC38A1-202ENST00000439706 TTC22Q5TAA0 569 aa15.16■□□□□ 0.02
SLC38A1-202ENST00000439706 LRSAM1Q6UWE0 723 aa15.15■□□□□ 0.02
SLC38A1-202ENST00000439706 F6X3S4 739 aa15.15■□□□□ 0.02
SLC38A1-202ENST00000439706 CCDC39Q9UFE4 941 aa15.15■□□□□ 0.02
SLC38A1-202ENST00000439706 TRPM2O94759 1503 aa15.15■□□□□ 0.02
SLC38A1-202ENST00000439706 C14orf93Q9H972 538 aaKnown RBP15.15■□□□□ 0.02
SLC38A1-202ENST00000439706 CEP152O94986 1710 aa15.14■□□□□ 0.01
SLC38A1-202ENST00000439706 VIRMAQ69YN4 1812 aaKnown RBP15.14■□□□□ 0.01
SLC38A1-202ENST00000439706 TMX3Q96JJ7 454 aa15.14■□□□□ 0.01
SLC38A1-202ENST00000439706 STAC3Q96MF2 364 aa15.14■□□□□ 0.01
SLC38A1-202ENST00000439706 KDM5AP29375 1690 aaKnown RBP15.14■□□□□ 0.01
SLC38A1-202ENST00000439706 KIAA2012Q0VF49 1180 aa15.14■□□□□ 0.01
SLC38A1-202ENST00000439706 MEIS3Q99687 375 aa15.14■□□□□ 0.01
SLC38A1-202ENST00000439706 PRDM4Q9UKN5 801 aa15.14■□□□□ 0.01
SLC38A1-202ENST00000439706 CLTCL1P53675 1640 aa15.14■□□□□ 0.01
SLC38A1-202ENST00000439706 DDX54Q8TDD1 881 aaKnown RBP15.14■□□□□ 0.01
SLC38A1-202ENST00000439706 TSPY26PQ9H489 355 aa15.14■□□□□ 0.01
SLC38A1-202ENST00000439706 TERF2IPQ9NYB0 399 aa15.13■□□□□ 0.01
SLC38A1-202ENST00000439706 PLCH2O75038 1416 aa15.13■□□□□ 0.01
SLC38A1-202ENST00000439706 A0A1W2PP64 1363 aa15.13■□□□□ 0.01
SLC38A1-202ENST00000439706 HCLS1P14317 486 aaPredicted RBP15.13■□□□□ 0.01
SLC38A1-202ENST00000439706 ALDH1L2Q3SY69 923 aa15.13■□□□□ 0.01
SLC38A1-202ENST00000439706 SASS6Q6UVJ0 657 aa15.13■□□□□ 0.01
SLC38A1-202ENST00000439706 ZNF428Q96B54 188 aa15.13■□□□□ 0.01
SLC38A1-202ENST00000439706 MCM10Q7L590 875 aa15.12■□□□□ 0.01
SLC38A1-202ENST00000439706 PALD1Q9ULE6 856 aa15.12■□□□□ 0.01
SLC38A1-202ENST00000439706 ZMYM3Q14202 1370 aa15.12■□□□□ 0.01
SLC38A1-202ENST00000439706 CSPP1Q1MSJ5 1256 aa15.12■□□□□ 0.01
SLC38A1-202ENST00000439706 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.12■□□□□ 0.01
SLC38A1-202ENST00000439706 ZNF500O60304 480 aaPredicted RBP15.11■□□□□ 0.01
SLC38A1-202ENST00000439706 HDGFL2Q7Z4V5 671 aaPredicted RBP15.11■□□□□ 0.01
SLC38A1-202ENST00000439706 STAG3Q9UJ98 1225 aa15.11■□□□□ 0.01
SLC38A1-202ENST00000439706 ABCC11Q96J66 1382 aa15.11■□□□□ 0.01
SLC38A1-202ENST00000439706 FIBPO43427 364 aa15.11■□□□□ 0.01
SLC38A1-202ENST00000439706 IQSEC2Q5JU85 1478 aa15.11■□□□□ 0.01
SLC38A1-202ENST00000439706 PPP4R3BQ5MIZ7 849 aa15.11■□□□□ 0.01
SLC38A1-202ENST00000439706 ABCC1P33527 1531 aa15.1■□□□□ 0.01
SLC38A1-202ENST00000439706 REC8O95072 547 aa15.1■□□□□ 0.01
SLC38A1-202ENST00000439706 GNAI1P63096 354 aa15.1■□□□□ 0.01
SLC38A1-202ENST00000439706 PDLIM2Q96JY6 352 aa15.1■□□□□ 0.01
SLC38A1-202ENST00000439706 ERCC6L2Q5T890 1561 aa15.09■□□□□ 0.01
SLC38A1-202ENST00000439706 DYNC1I1O14576 645 aa15.09■□□□□ 0.01
SLC38A1-202ENST00000439706 ERC2O15083 957 aa15.09■□□□□ 0.01
SLC38A1-202ENST00000439706 MAPK8IP2Q13387 824 aaPredicted RBP15.09■□□□□ 0.01
SLC38A1-202ENST00000439706 WAPLQ7Z5K2 1190 aa15.09■□□□□ 0.01
SLC38A1-202ENST00000439706 NCKAP5LQ9HCH0 1330 aa15.09■□□□□ 0.01
SLC38A1-202ENST00000439706 NFE2L2Q16236 605 aa15.09■□□□□ 0.01
SLC38A1-202ENST00000439706 USP48Q86UV5 1035 aa15.09■□□□□ 0.01
SLC38A1-202ENST00000439706 CHMP4BQ9H444 224 aaKnown RBP15.09■□□□□ 0.01
SLC38A1-202ENST00000439706 CWC22Q9HCG8 908 aaKnown RBP15.09■□□□□ 0.01
SLC38A1-202ENST00000439706 FCHSD2O94868 740 aa15.08■□□□□ 0.01
SLC38A1-202ENST00000439706 ADCY5O95622 1261 aa15.08■□□□□ 0.01
SLC38A1-202ENST00000439706 API5Q9BZZ5 524 aaKnown RBP15.08■□□□□ 0.01
SLC38A1-202ENST00000439706 DCTPP1Q9H773 170 aa15.08■□□□□ 0.01
SLC38A1-202ENST00000439706 CHD1O14646 1710 aa15.08■□□□□ 0
SLC38A1-202ENST00000439706 SLC4A2P04920 1241 aa15.08■□□□□ 0
SLC38A1-202ENST00000439706 MAP7D2Q96T17 732 aa15.08■□□□□ 0
SLC38A1-202ENST00000439706 CDK19Q9BWU1 502 aa15.08■□□□□ 0
SLC38A1-202ENST00000439706 IL1RAPL2Q9NP60 686 aa15.08■□□□□ 0
SLC38A1-202ENST00000439706 POLKQ9UBT6 870 aa15.08■□□□□ 0
SLC38A1-202ENST00000439706 NOLC1Q14978 699 aaKnown RBP eCLIP15.07■□□□□ 0
SLC38A1-202ENST00000439706 GIMAP6Q6P9H5 292 aa15.07■□□□□ 0
SLC38A1-202ENST00000439706 CYP2E1P05181 493 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms