RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 MAN1A2O60476 641 aa10.08□□□□□ -0.8
UPP2-IT1-201ENST00000439185 AP1G2O75843 785 aa10.08□□□□□ -0.8
UPP2-IT1-201ENST00000439185 CCDC116Q8IYX3 515 aa10.08□□□□□ -0.8
UPP2-IT1-201ENST00000439185 MEIOBQ8N635 442 aa10.08□□□□□ -0.8
UPP2-IT1-201ENST00000439185 EMILIN1Q9Y6C2 1016 aa10.08□□□□□ -0.8
UPP2-IT1-201ENST00000439185 LINC00528Q8N1L1 170 aa10.07□□□□□ -0.8
UPP2-IT1-201ENST00000439185 ZBTB33Q86T24 672 aa10.06□□□□□ -0.8
UPP2-IT1-201ENST00000439185 PPP1R26Q5T8A7 1209 aaPredicted RBP10.04□□□□□ -0.8
UPP2-IT1-201ENST00000439185 TSEN34Q9BSV6 310 aaKnown RBP10.04□□□□□ -0.8
UPP2-IT1-201ENST00000439185 ZC3H4Q9UPT8 1303 aaKnown RBP10.04□□□□□ -0.8
UPP2-IT1-201ENST00000439185 SLC10A4Q96EP9 437 aa10.03□□□□□ -0.8
UPP2-IT1-201ENST00000439185 KCTD15Q96SI1 283 aaPredicted RBP10.03□□□□□ -0.8
UPP2-IT1-201ENST00000439185 SOS2Q07890 1332 aaPredicted RBP10.03□□□□□ -0.8
UPP2-IT1-201ENST00000439185 PTK2Q05397 1052 aa10.02□□□□□ -0.81
UPP2-IT1-201ENST00000439185 EPS8L1Q8TE68 723 aa10.02□□□□□ -0.81
UPP2-IT1-201ENST00000439185 OCSTAMPQ9BR26 566 aa10.02□□□□□ -0.81
UPP2-IT1-201ENST00000439185 PGPEP1Q9NXJ5 209 aa10.02□□□□□ -0.81
UPP2-IT1-201ENST00000439185 CDV3Q9UKY7 258 aaKnown RBP10.02□□□□□ -0.81
UPP2-IT1-201ENST00000439185 CBLBQ13191 982 aa10.01□□□□□ -0.81
UPP2-IT1-201ENST00000439185 DNMT3LQ9UJW3 386 aa10.01□□□□□ -0.81
UPP2-IT1-201ENST00000439185 LORP23490 312 aaPredicted RBP10□□□□□ -0.81
UPP2-IT1-201ENST00000439185 ZSCAN1Q8NBB4 408 aa10□□□□□ -0.81
UPP2-IT1-201ENST00000439185 PPFIA3O75145 1194 aa9.99□□□□□ -0.81
UPP2-IT1-201ENST00000439185 USP17L8P0C7I0 530 aa9.99□□□□□ -0.81
UPP2-IT1-201ENST00000439185 ADAM32Q8TC27 787 aa9.99□□□□□ -0.81
UPP2-IT1-201ENST00000439185 HMX1Q9NP08 348 aaPredicted RBP9.99□□□□□ -0.81
UPP2-IT1-201ENST00000439185 GPSM3Q9Y4H4 160 aa9.99□□□□□ -0.81
UPP2-IT1-201ENST00000439185 FAM181BA6NEQ2 426 aa9.98□□□□□ -0.81
UPP2-IT1-201ENST00000439185 TTLL8A6PVC2 850 aa9.98□□□□□ -0.81
UPP2-IT1-201ENST00000439185 VSIG8P0DPA2 414 aa9.98□□□□□ -0.81
UPP2-IT1-201ENST00000439185 INTS6LQ5JSJ4 861 aaKnown RBP9.98□□□□□ -0.81
UPP2-IT1-201ENST00000439185 Q6ZVU0 165 aa9.98□□□□□ -0.81
UPP2-IT1-201ENST00000439185 RFC5P40937 340 aa9.97□□□□□ -0.81
UPP2-IT1-201ENST00000439185 DHX9Q08211 1270 aaKnown RBP9.97□□□□□ -0.81
UPP2-IT1-201ENST00000439185 PNMA1Q8ND90 353 aa9.97□□□□□ -0.81
UPP2-IT1-201ENST00000439185 FIGNL2A6NMB9 653 aa9.96□□□□□ -0.82
UPP2-IT1-201ENST00000439185 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.96□□□□□ -0.82
UPP2-IT1-201ENST00000439185 SLC24A1O60721 1099 aa9.95□□□□□ -0.82
UPP2-IT1-201ENST00000439185 SPINT1O43278 529 aa9.94□□□□□ -0.82
UPP2-IT1-201ENST00000439185 PCMTD1Q96MG8 357 aaPredicted RBP9.94□□□□□ -0.82
UPP2-IT1-201ENST00000439185 AGBL1Q96MI9 1066 aa9.94□□□□□ -0.82
UPP2-IT1-201ENST00000439185 RAB15P59190 212 aa9.93□□□□□ -0.82
UPP2-IT1-201ENST00000439185 RELBQ01201 579 aa9.93□□□□□ -0.82
UPP2-IT1-201ENST00000439185 DZIP3Q86Y13 1208 aaKnown RBP9.93□□□□□ -0.82
UPP2-IT1-201ENST00000439185 GOPCQ9HD26 462 aa9.93□□□□□ -0.82
UPP2-IT1-201ENST00000439185 PTSQ03393 145 aa9.92□□□□□ -0.82
UPP2-IT1-201ENST00000439185 NEUROD2Q15784 382 aa9.92□□□□□ -0.82
UPP2-IT1-201ENST00000439185 NBPF20Q3BBV1 942 aa9.92□□□□□ -0.82
UPP2-IT1-201ENST00000439185 TMPRSS4Q9NRS4 437 aa9.92□□□□□ -0.82
UPP2-IT1-201ENST00000439185 TMEM259Q4ZIN3 620 aa9.91□□□□□ -0.82
UPP2-IT1-201ENST00000439185 IL27Q8NEV9 243 aa9.91□□□□□ -0.82
UPP2-IT1-201ENST00000439185 TRIM34Q9BYJ4 488 aa9.91□□□□□ -0.82
UPP2-IT1-201ENST00000439185 ERVH48-1M5A8F1 160 aa9.89□□□□□ -0.83
UPP2-IT1-201ENST00000439185 CTSOP43234 321 aaPredicted RBP9.89□□□□□ -0.83
UPP2-IT1-201ENST00000439185 ZNF784Q8NCA9 323 aaPredicted RBP9.89□□□□□ -0.83
UPP2-IT1-201ENST00000439185 INSM2Q96T92 566 aaPredicted RBP9.89□□□□□ -0.83
UPP2-IT1-201ENST00000439185 ZNF395Q9H8N7 513 aaPredicted RBP9.89□□□□□ -0.83
UPP2-IT1-201ENST00000439185 GPR161Q8N6U8 529 aaKnown RBP9.88□□□□□ -0.83
UPP2-IT1-201ENST00000439185 ADD1P35611 737 aaKnown RBP9.87□□□□□ -0.83
UPP2-IT1-201ENST00000439185 CCDC155Q8N6L0 562 aa9.87□□□□□ -0.83
UPP2-IT1-201ENST00000439185 POLMQ9NP87 494 aaPredicted RBP9.87□□□□□ -0.83
UPP2-IT1-201ENST00000439185 ESPNB1AK53 854 aa9.86□□□□□ -0.83
UPP2-IT1-201ENST00000439185 LILRA1O75019 489 aa9.86□□□□□ -0.83
UPP2-IT1-201ENST00000439185 ADH1AP07327 375 aa9.85□□□□□ -0.83
UPP2-IT1-201ENST00000439185 SLC35F4A4IF30 521 aa9.84□□□□□ -0.83
UPP2-IT1-201ENST00000439185 ZBBXA8MT70 800 aa9.83□□□□□ -0.84
UPP2-IT1-201ENST00000439185 PTGIRP43119 386 aa9.83□□□□□ -0.84
UPP2-IT1-201ENST00000439185 KDF1Q8NAX2 398 aaPredicted RBP9.83□□□□□ -0.84
UPP2-IT1-201ENST00000439185 NANOS1Q8WY41 292 aaKnown RBP9.83□□□□□ -0.84
UPP2-IT1-201ENST00000439185 GJD4Q96KN9 370 aaPredicted RBP9.83□□□□□ -0.84
UPP2-IT1-201ENST00000439185 CNTNAP3BQ96NU0 1288 aa9.83□□□□□ -0.84
UPP2-IT1-201ENST00000439185 CNTNAP3Q9BZ76 1288 aa9.83□□□□□ -0.84
UPP2-IT1-201ENST00000439185 CYLDQ9NQC7 956 aa9.83□□□□□ -0.84
UPP2-IT1-201ENST00000439185 PCDHB9Q9Y5E1 797 aa9.83□□□□□ -0.84
UPP2-IT1-201ENST00000439185 KRT76Q01546 638 aa9.82□□□□□ -0.84
UPP2-IT1-201ENST00000439185 SEPT12Q8IYM1 358 aa9.82□□□□□ -0.84
UPP2-IT1-201ENST00000439185 RNF217Q8TC41 542 aa9.82□□□□□ -0.84
UPP2-IT1-201ENST00000439185 GIGYF1O75420 1035 aaPredicted RBP9.81□□□□□ -0.84
UPP2-IT1-201ENST00000439185 FBXO45P0C2W1 286 aa9.81□□□□□ -0.84
UPP2-IT1-201ENST00000439185 VWA5B2Q8N398 1253 aa9.81□□□□□ -0.84
UPP2-IT1-201ENST00000439185 COL25A1Q9BXS0 654 aaPredicted RBP9.81□□□□□ -0.84
UPP2-IT1-201ENST00000439185 ITGA6P23229 1130 aa9.8□□□□□ -0.84
UPP2-IT1-201ENST00000439185 BRPF1P55201 1214 aaPredicted RBP9.8□□□□□ -0.84
UPP2-IT1-201ENST00000439185 FOXD4L5Q5VV16 416 aaPredicted RBP9.79□□□□□ -0.84
UPP2-IT1-201ENST00000439185 CDC14CA4D256 554 aa9.78□□□□□ -0.84
UPP2-IT1-201ENST00000439185 SENP3-EIF4A1A0A087X0R7 540 aa9.77□□□□□ -0.85
UPP2-IT1-201ENST00000439185 RNFT1Q5M7Z0 435 aa9.77□□□□□ -0.85
UPP2-IT1-201ENST00000439185 SV2AQ7L0J3 742 aa9.77□□□□□ -0.85
UPP2-IT1-201ENST00000439185 TRIM52Q96A61 297 aa9.77□□□□□ -0.85
UPP2-IT1-201ENST00000439185 LYSMD3Q7Z3D4 306 aa9.76□□□□□ -0.85
UPP2-IT1-201ENST00000439185 PRICKLE2Q7Z3G6 844 aa9.75□□□□□ -0.85
UPP2-IT1-201ENST00000439185 BANK1Q8NDB2 785 aa9.75□□□□□ -0.85
UPP2-IT1-201ENST00000439185 ATP5J2-PTCD1G3V325 749 aa9.74□□□□□ -0.85
UPP2-IT1-201ENST00000439185 RNF144AP50876 292 aaPredicted RBP9.74□□□□□ -0.85
UPP2-IT1-201ENST00000439185 NR1H3Q13133 447 aa9.74□□□□□ -0.85
UPP2-IT1-201ENST00000439185 RNF20Q5VTR2 975 aa9.73□□□□□ -0.85
UPP2-IT1-201ENST00000439185 MEN1O00255 615 aa9.72□□□□□ -0.85
UPP2-IT1-201ENST00000439185 RHOQP17081 205 aa9.72□□□□□ -0.85
UPP2-IT1-201ENST00000439185 MCCD1P59942 119 aaPredicted RBP9.72□□□□□ -0.85
UPP2-IT1-201ENST00000439185 CCDC125Q86Z20 511 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms