RNA–Protein interactions for RNA: ENST00000438886.1

APEX1-203, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-203ENST00000438886 PEAK1Q9H792 1746 aa11.46□□□□□ -0.57
APEX1-203ENST00000438886 COL5A2P05997 1499 aaPredicted RBP11.46□□□□□ -0.57
APEX1-203ENST00000438886 SOX12O15370 315 aa11.46□□□□□ -0.57
APEX1-203ENST00000438886 HOXC9P31274 260 aa11.46□□□□□ -0.57
APEX1-203ENST00000438886 RGPD5Q99666 1765 aa11.46□□□□□ -0.58
APEX1-203ENST00000438886 CAMTA1Q9Y6Y1 1673 aa11.46□□□□□ -0.58
APEX1-203ENST00000438886 FAM83GA6ND36 823 aa11.45□□□□□ -0.58
APEX1-203ENST00000438886 PLEKHG5O94827 1062 aa11.45□□□□□ -0.58
APEX1-203ENST00000438886 RRS1Q15050 365 aaKnown RBP11.45□□□□□ -0.58
APEX1-203ENST00000438886 ZNF772Q68DY9 489 aaPredicted RBP11.45□□□□□ -0.58
APEX1-203ENST00000438886 CFAP53Q96M91 514 aa11.45□□□□□ -0.58
APEX1-203ENST00000438886 C8orf37Q96NL8 207 aa11.45□□□□□ -0.58
APEX1-203ENST00000438886 ERBB3P21860 1342 aa11.44□□□□□ -0.58
APEX1-203ENST00000438886 AFF2P51816 1311 aa11.44□□□□□ -0.58
APEX1-203ENST00000438886 PPP2R1AP30153 589 aa11.44□□□□□ -0.58
APEX1-203ENST00000438886 TNNT2P45379 298 aaPredicted RBP11.44□□□□□ -0.58
APEX1-203ENST00000438886 UNC5CLQ8IV45 518 aa11.44□□□□□ -0.58
APEX1-203ENST00000438886 BTG4Q9NY30 223 aa11.44□□□□□ -0.58
APEX1-203ENST00000438886 EMILIN1Q9Y6C2 1016 aa11.44□□□□□ -0.58
APEX1-203ENST00000438886 PLEKHG2Q9H7P9 1386 aa11.43□□□□□ -0.58
APEX1-203ENST00000438886 WDR17Q8IZU2 1322 aa11.43□□□□□ -0.58
APEX1-203ENST00000438886 ZBTB7CA1YPR0 619 aa11.43□□□□□ -0.58
APEX1-203ENST00000438886 MTHFSP49914 203 aa11.43□□□□□ -0.58
APEX1-203ENST00000438886 CHRNA2Q15822 529 aa11.43□□□□□ -0.58
APEX1-203ENST00000438886 USP21Q9UK80 565 aa11.43□□□□□ -0.58
APEX1-203ENST00000438886 BCL9LQ86UU0 1499 aa11.43□□□□□ -0.58
APEX1-203ENST00000438886 CRB1P82279 1406 aa11.43□□□□□ -0.58
APEX1-203ENST00000438886 PPM1GO15355 546 aaPredicted RBP11.42□□□□□ -0.58
APEX1-203ENST00000438886 EVA1CP58658 441 aa11.42□□□□□ -0.58
APEX1-203ENST00000438886 DIEXFQ68CQ4 756 aaKnown RBP11.42□□□□□ -0.58
APEX1-203ENST00000438886 PHF23Q9BUL5 403 aaPredicted RBP11.42□□□□□ -0.58
APEX1-203ENST00000438886 ATRNO75882 1429 aa11.42□□□□□ -0.58
APEX1-203ENST00000438886 COL3A1P02461 1466 aaPredicted RBP11.41□□□□□ -0.58
APEX1-203ENST00000438886 VPS72Q15906 364 aa11.41□□□□□ -0.58
APEX1-203ENST00000438886 ANKRD24Q8TF21 1146 aa11.41□□□□□ -0.58
APEX1-203ENST00000438886 TRPC5Q9UL62 973 aaPredicted RBP11.41□□□□□ -0.58
APEX1-203ENST00000438886 THRAP3Q9Y2W1 955 aaKnown RBP11.41□□□□□ -0.58
APEX1-203ENST00000438886 CSB-PGBD3P0DP91 1061 aa11.4□□□□□ -0.58
APEX1-203ENST00000438886 CNGB1Q14028 1251 aaPredicted RBP11.4□□□□□ -0.58
APEX1-203ENST00000438886 NUDCQ9Y266 331 aa11.4□□□□□ -0.58
APEX1-203ENST00000438886 AXIN2Q9Y2T1 843 aa11.4□□□□□ -0.58
APEX1-203ENST00000438886 NCAPD2Q15021 1401 aa11.4□□□□□ -0.58
APEX1-203ENST00000438886 WNK3Q9BYP7 1800 aa11.39□□□□□ -0.59
APEX1-203ENST00000438886 DIAPH1O60610 1272 aaKnown RBP11.39□□□□□ -0.59
APEX1-203ENST00000438886 RGPD1P0DJD0 1748 aa11.39□□□□□ -0.59
APEX1-203ENST00000438886 FBLN1P23142 703 aa11.39□□□□□ -0.59
APEX1-203ENST00000438886 HSP90AB2PQ58FF8 381 aa11.39□□□□□ -0.59
APEX1-203ENST00000438886 CARD10Q9BWT7 1032 aa11.39□□□□□ -0.59
APEX1-203ENST00000438886 SPATA31A5Q5VU36 1347 aa11.38□□□□□ -0.59
APEX1-203ENST00000438886 SPATA31A7Q8IWB4 1347 aa11.38□□□□□ -0.59
APEX1-203ENST00000438886 EIF4A2Q14240 407 aaKnown RBP11.38□□□□□ -0.59
APEX1-203ENST00000438886 TOM1L2Q6ZVM7 507 aa11.38□□□□□ -0.59
APEX1-203ENST00000438886 CDCA7Q9BWT1 371 aaPredicted RBP11.38□□□□□ -0.59
APEX1-203ENST00000438886 PARP4Q9UKK3 1724 aaKnown RBP11.38□□□□□ -0.59
APEX1-203ENST00000438886 SPATA31A1Q5TZJ5 1347 aa11.37□□□□□ -0.59
APEX1-203ENST00000438886 IGSF1Q8N6C5 1336 aa11.37□□□□□ -0.59
APEX1-203ENST00000438886 TCP11L2Q8N4U5 519 aa11.37□□□□□ -0.59
APEX1-203ENST00000438886 STRN4Q9NRL3 753 aa11.37□□□□□ -0.59
APEX1-203ENST00000438886 RGPD2P0DJD1 1756 aa11.36□□□□□ -0.59
APEX1-203ENST00000438886 CCER2I3L3R5 266 aa11.36□□□□□ -0.59
APEX1-203ENST00000438886 IL13P35225 146 aa11.36□□□□□ -0.59
APEX1-203ENST00000438886 RBM6P78332 1123 aaKnown RBP11.36□□□□□ -0.59
APEX1-203ENST00000438886 LARP1Q6PKG0 1096 aaKnown RBP11.36□□□□□ -0.59
APEX1-203ENST00000438886 BARGINQ6ZT62 677 aa11.36□□□□□ -0.59
APEX1-203ENST00000438886 GJD4Q96KN9 370 aaPredicted RBP11.36□□□□□ -0.59
APEX1-203ENST00000438886 QTRT2Q9H974 415 aaKnown RBP11.36□□□□□ -0.59
APEX1-203ENST00000438886 NLRP2Q9NX02 1062 aa11.36□□□□□ -0.59
APEX1-203ENST00000438886 CCDC9Q9Y3X0 531 aaKnown RBP11.36□□□□□ -0.59
APEX1-203ENST00000438886 KDRP35968 1356 aa11.36□□□□□ -0.59
APEX1-203ENST00000438886 GLI3P10071 1580 aa11.36□□□□□ -0.59
APEX1-203ENST00000438886 LTV1Q96GA3 475 aaPredicted RBP11.35□□□□□ -0.59
APEX1-203ENST00000438886 PNNQ9H307 717 aaKnown RBP11.35□□□□□ -0.59
APEX1-203ENST00000438886 THSD7AQ9UPZ6 1657 aa11.35□□□□□ -0.59
APEX1-203ENST00000438886 EYA1Q99502 592 aa11.34□□□□□ -0.59
APEX1-203ENST00000438886 DISP2A7MBM2 1401 aa11.34□□□□□ -0.59
APEX1-203ENST00000438886 ONECUT3O60422 494 aaPredicted RBP11.33□□□□□ -0.6
APEX1-203ENST00000438886 RXRBP28702 533 aa11.33□□□□□ -0.6
APEX1-203ENST00000438886 WDR43Q15061 677 aaKnown RBP eCLIP11.33□□□□□ -0.6
APEX1-203ENST00000438886 NBPF6Q5VWK0 638 aa11.33□□□□□ -0.6
APEX1-203ENST00000438886 RAPGEF4Q8WZA2 1011 aa11.33□□□□□ -0.6
APEX1-203ENST00000438886 NBPF4Q96M43 638 aa11.33□□□□□ -0.6
APEX1-203ENST00000438886 PKD1L3Q7Z443 1732 aa11.32□□□□□ -0.6
APEX1-203ENST00000438886 IL2RBP14784 551 aa11.32□□□□□ -0.6
APEX1-203ENST00000438886 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
APEX1-203ENST00000438886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.32□□□□□ -0.62e-11■□□□□ 11.3
APEX1-203ENST00000438886 RGS17Q9UGC6 210 aaPredicted RBP11.32□□□□□ -0.6
APEX1-203ENST00000438886 OVOS2A0A0G2JMS6 1433 aa11.32□□□□□ -0.6
APEX1-203ENST00000438886 U2SURPO15042 1029 aaKnown RBP11.31□□□□□ -0.6
APEX1-203ENST00000438886 FCHSD2O94868 740 aa11.31□□□□□ -0.6
APEX1-203ENST00000438886 NEFMP07197 916 aa11.31□□□□□ -0.6
APEX1-203ENST00000438886 TATP17735 454 aaPredicted RBP11.31□□□□□ -0.6
APEX1-203ENST00000438886 TNS2Q63HR2 1409 aa11.31□□□□□ -0.6
APEX1-203ENST00000438886 LRRC37A3O60309 1634 aa11.31□□□□□ -0.6
APEX1-203ENST00000438886 U2AF1L5P0DN76 240 aaPredicted RBP11.3□□□□□ -0.6
APEX1-203ENST00000438886 U2AF1Q01081 240 aaKnown RBP eCLIP11.3□□□□□ -0.6
APEX1-203ENST00000438886 SULT6B1Q6IMI4 303 aa11.3□□□□□ -0.6
APEX1-203ENST00000438886 MEGF6O75095 1541 aa11.3□□□□□ -0.6
APEX1-203ENST00000438886 FAM98CQ17RN3 349 aaKnown RBP11.29□□□□□ -0.6
APEX1-203ENST00000438886 AMOTQ4VCS5 1084 aa11.29□□□□□ -0.6
APEX1-203ENST00000438886 POTEAQ6S8J7 498 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms